EMLSAP00000007597, EMLSAP00000007597 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000007597
Unique NameEMLSAP00000007597
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length575
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228PDZcoord: 129..201
e-value: 1.2E-14
score: 64.6
coord: 493..571
e-value: 2.1E-18
score: 77.2
IPR001478PDZ domainPFAMPF00595PDZcoord: 485..567
e-value: 1.2E-15
score: 57.3
coord: 123..197
e-value: 2.9E-9
score: 36.8
IPR001478PDZ domainPROSITEPS50106PDZcoord: 120..202
score: 15.581
IPR001478PDZ domainPROSITEPS50106PDZcoord: 484..567
score: 18.657
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 455..569
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 388..439
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 106..202
NoneNo IPR availableGENE3D2.30.42.10coord: 107..202
e-value: 1.8E-18
score: 66.0
NoneNo IPR availableGENE3D2.30.42.10coord: 390..440
e-value: 1.0E-8
score: 34.5
NoneNo IPR availableGENE3D2.30.42.10coord: 473..570
e-value: 6.5E-25
score: 86.7
NoneNo IPR availablePANTHERPTHR19964:SF31SUBFAMILY NOT NAMEDcoord: 65..575
NoneNo IPR availablePANTHERPTHR19964MULTIPLE PDZ DOMAIN PROTEINcoord: 65..575

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000007597 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000007597EMLSAT00000007597-703444Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000007597 ID=EMLSAP00000007597|Name=EMLSAP00000007597|organism=Lepeophtheirus salmonis|type=polypeptide|length=575bp
MCFRSHQASRQCCQLISGSMSLWPGITRLPILEGEVSHVEIPRTNSSLGI
TIVGGADTPLVCASLRKMSSVLRLGVYRERIEKYGARPNSTGSSNVSRQS
MKRKKLKHVNESKDEEGLFSFTLERLPGKQLGLRLSGNCSETGIFIVDIQ
KGSTMGADGRLQIFDRILYINGTDVRNAGIAQASALIQNNDKVSLVVVRR
KPTDPVLYNYDKENSSTSENTSSNGSCHTRSKSAPAPMHNDRLGTVLSNK
NSNQEENGQCEVASSTEELDEPYYDNLDGDDLMGIYETLDRKRQESKEIA
KSHSMEALETPDKKNEALKARPKIPCKTSTQSQQSKRQSFHEIPAPSISN
ALSVEKSPSFGEDLSNTDGNSSMAAFIKRALRIQGPCLLQKTVIVKKNPR
ESLGMRIGGGIGSNEGDTPIYIANIHPHGCIGKSKQMKVRTTINLSQVSL
GILDGPETSFGASNFIPSWMYWQKMPRELQYPKTVILHRREHASWGFSIV
GGTDSNGRPTEPIHVLFVVPDSPAAKDGRIRCGDRLLAVDGHTLENIPHS
VAVGMLKQTSTRVVMEVVSWMGTEL
back to top
Add to Basket