EMLSAP00000007741, EMLSAP00000007741 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000007741
Unique NameEMLSAP00000007741
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length648
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 169..177
score: 43.92
coord: 161..169
score: 60.8
coord: 124..139
score: 50.05
coord: 108..124
score: 54.85
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399ZnF_C4coord: 105..180
e-value: 4.5E-32
score: 122.6
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 107..179
e-value: 1.7E-25
score: 88.9
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 108..134
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 105..184
score: 19.208
IPR001723Steroid hormone receptorPRINTSPR00398STRDHORMONERcoord: 173..183
score: 31.68
coord: 527..542
score: 40.44
coord: 584..601
score: 35.31
coord: 437..458
score: 25.11
coord: 458..474
score: 36.42
IPR000536Nuclear hormone receptor, ligand-binding, coreSMARTSM00430HOLIcoord: 436..596
e-value: 4.8E-25
score: 99.2
IPR000536Nuclear hormone receptor, ligand-binding, corePFAMPF00104Hormone_recepcoord: 429..607
e-value: 3.6E-23
score: 81.6
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 410..625
e-value: 4.7E-81
score: 271.6
coord: 314..323
e-value: 4.7E-81
score: 271.6
coord: 174..193
e-value: 4.7E-81
score: 271.6
IPR008946Nuclear hormone receptor, ligand-bindingSUPERFAMILY48508Nuclear receptor ligand-binding domaincoord: 178..192
coord: 418..625
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 105..173
e-value: 7.2E-31
score: 105.8
NoneNo IPR availablePANTHERPTHR24083:SF0NUCLEAR RECEPTOR SUBFAMILY 2 GROUP E MEMBER 1coord: 96..642
NoneNo IPR availablePANTHERPTHR24083NUCLEAR HORMONE RECEPTORcoord: 96..642
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 105..193

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000007741 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000007741EMLSAT00000007741-703588Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000007741 ID=EMLSAP00000007741|Name=EMLSAP00000007741|organism=Lepeophtheirus salmonis|type=polypeptide|length=648bp
SHFLHNPIHEIVKVAGHFLGRIGGEGSSSASDLSTSSSSSLLGDAGALNL
SESSEAVCDSFNRQKALAQKFRLFALHQRNLLTKKTHSKIVVNKTEMGTG
DRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRQRIYTCKAQGEF
KGRCPIDKTHRNQCRACRLKKCFDCSMNKDAVQHERGPRKSKLQKDLNSA
FRNGNPLLSPTSLNSSSPSSTTLNTLSQPSNFGISVTSSSNHQLHPLPPP
FHYSHHGHHLPSLLEPPKLSPFLFPAAXAAAAAAXAAAGSNLFLNPPTTL
NTTPPPSKLSPSSSSSSSSSPMSHHPLMSPPNVINSNSGVKMSHLTPHPF
FPHHQRPALLSLLSGENNKITELWKSPPPPLLSSSSILSIPPASGSAILP
PPPPLFPFFPSSVSKEDEESEHPPSSFSPTWPMLQETTARLLFMAVRWVK
CLAPFQTLSSKDQLLLLQESWKDLFLMHLSQWAIPWDLSNLLLSRHASLV
DRSDVEDHVVDMEIKTVQEIMCRFRQLSPDGTECGXLKAIVLFKPETAGL
NDFHPVEMLQDQAQCILGDYVRNRYSRQPTRFGRLLLAIPLLRMIRANTI
ENFFFRETVGDTSVIRLIQDMYNADKDIDNNEINSFVVNSLCAKCNIN
back to top
Add to Basket