EMLSAP00000008334, EMLSAP00000008334 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000008334
Unique NameEMLSAP00000008334
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1017
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 330..351
NoneNo IPR availablePANTHERPTHR10037:SF55VOLTAGE-DEPENDENT CALCIUM CHANNEL TYPE A ALPHA-1 SUBUNITcoord: 1..1017
NoneNo IPR availablePANTHERPTHR10037VOLTAGE-GATED CATION CHANNEL (CALCIUM AND SODIUM)coord: 1..1017
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 376..576
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 878..948
coord: 681..839
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 78..167
coord: 206..314
NoneNo IPR availableTMHMMTMhelixcoord: 72..94
NoneNo IPR availableTMHMMTMhelixcoord: 994..1016
NoneNo IPR availableTMHMMTMhelixcoord: 285..307
NoneNo IPR availableTMHMMTMhelixcoord: 549..571
NoneNo IPR availableTMHMMTMhelixcoord: 473..495
NoneNo IPR availableTMHMMTMhelixcoord: 375..397
NoneNo IPR availableTMHMMTMhelixcoord: 15..33
NoneNo IPR availableTMHMMTMhelixcoord: 814..836
NoneNo IPR availableTMHMMTMhelixcoord: 923..945
NoneNo IPR availableTMHMMTMhelixcoord: 407..429
NoneNo IPR availableTMHMMTMhelixcoord: 750..772
IPR002077Voltage-dependent calcium channel, alpha-1 subunitPRINTSPR00167CACHANNELcoord: 308..332
score: 53.19
coord: 945..965
score: 29.09
coord: 269..286
score: 34.38
IPR027359Voltage-dependent channel, four helix bundle domainGENE3D1.20.120.350coord: 79..220
e-value: 7.8E-17
score: 60.6
coord: 680..792
e-value: 3.3E-19
score: 68.3
coord: 377..454
e-value: 1.8E-16
score: 59.5
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 117..225
e-value: 9.8E-17
score: 60.7
coord: 379..572
e-value: 4.3E-44
score: 150.0
coord: 717..943
e-value: 4.5E-40
score: 136.9
coord: 241..306
e-value: 1.6E-7
score: 30.7

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000008334 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000008334EMLSAT00000008334-704181Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000008334 ID=EMLSAP00000008334|Name=EMLSAP00000008334|organism=Lepeophtheirus salmonis|type=polypeptide|length=1017bp
LLKTQQHVIYSINQAIQILKILLGHYTTIISFLRRTHLVMEKSLEMKLHH
PNKLPSSLFFLSGKNPIRRAVIWFVRWIVFEWIIIFTIIANCIVMALDQH
LPHKDKSKLSVQLEELEPVFMGIFTMEMCFKIVADGFILHHGSYLRNPWN
IMDFIVVISGSIYVHPNKSFIHISHYNDVIYYFYSTSFLPYLIPKSDKKE
NTGPDLSTLRTFRVLRPLKLVSGVPNRIITGGDSGNPCYRGSSKHSPVGK
KWVGPNNGITSFDNIGLAMLTVFQTNDALGNLFNWIFFIPLIIVGSFFML
NLFLGVLSGEFAKEKERVESRVGFMQLKEQQKLEKELNGVQKTHKFIKEN
EQTSFKKEFDDDSNFWRSERQFRFFIRLYAEFIFLGCFILEILIRLYALG
PRTYFSTTFNVFDCFVIVGSIVEVIWVHFKDKGGSFGLSALRALRLLRVF
KVTKYWSSLRNLVIALMNAISSIVSLLFLLFLFIFIFALLGMQIFGGSFN
FSTGTPTSNFNTITSALLTVFQVLTGEDWNQVMYTAIDSKGGRKGGGMVY
SLYFVMLTLCGDYTLLNVFLAIACDSLDQAAALTEAEEAEKERHKTTLSD
DIFLDMEVHDDKENKKYFDPIKAAEIAFEKAAEAAAKAATQEITIDQEEN
ISIKPILPYSSFFILSSSNPIRVSIHWLXTKKVFDCFIMCVIVLSSIALA
SEDPVDENSIRNKLLGYADYGFTTIFTLECSLKMIDLGFVLHPGAYLRDF
WNFLDITVVSCALISFYHTLAGTPTGQKLKSLKLLRVLRPLKTINRVPKL
KAVFDCVVISLKNVFNILIVYMLFQIIFAIVGVQLFNGKFFFCSDESRTN
ADECQGYYFHYEVPNETPKIVERTWERRSFHYDNCFRAIITLFAIQTILQ
DSMASTYENEGPKPWYRVEMSIFYIVFFVVFPFFFVNIFVALIIVTFNEL
GEAELQDNMDKNQKSCIDFAIQARPLELYVPQRTDGFYYHAWRLITSSPF
ENFIMVLIICNTILLML
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