EMLSAP00000008902, EMLSAP00000008902 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000008902
Unique NameEMLSAP00000008902
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length540
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 202..217
score: 57.64
coord: 186..202
score: 56.96
coord: 235..243
score: 57.49
coord: 243..251
score: 63.42
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399ZnF_C4coord: 183..254
e-value: 3.8E-40
score: 149.4
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 185..252
e-value: 1.5E-31
score: 108.3
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 186..212
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 183..258
score: 20.423
IPR016355Steroidogenic factor 1PIRSFPIRSF002530FTZ-F1coord: 109..540
e-value: 6.8E-63
score: 218.1
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 182..247
e-value: 4.1E-32
score: 109.8
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 445..495
e-value: 2.8E-24
score: 85.4
coord: 358..359
e-value: 2.8E-24
score: 85.4
coord: 248..267
e-value: 2.8E-24
score: 85.4
IPR008946Nuclear hormone receptor, ligand-bindingSUPERFAMILY48508Nuclear receptor ligand-binding domaincoord: 252..266
coord: 453..540
NoneNo IPR availablePANTHERPTHR24086FAMILY NOT NAMEDcoord: 147..495
NoneNo IPR availablePANTHERPTHR24086:SF0SUBFAMILY NOT NAMEDcoord: 147..495
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 184..267
NoneNo IPR availableTMHMMTMhelixcoord: 495..514

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000008902 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000008902EMLSAT00000008902-704749Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000008902 ID=EMLSAP00000008902|Name=EMLSAP00000008902|organism=Lepeophtheirus salmonis|type=polypeptide|length=540bp
MLPTEPLISIPYSNQRGRFHQPHIQXLPLAAPGSNHRSSSLILIKKEPNM
STSGSLSSGGSPPMVGGTLLPTMDMPIGNSFASLEDLSSVVHPLGLGGGG
PGSGGNPVDSGSNNSPPTLSYSTSPTHNMLGLLPDNNSCNLFNPSAGLPT
ASSNNNSAGSTSGDFGPGVVGQSDQPDSKDGMEELCPVCGDKVSGYHYGL
LTCESCKGFFKRTVQNKKVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVG
MKLEAVRHDRMRGGRNKFGPMYKRDRARKLQVLRQRQVIHGGVSMGPSSM
NNTXTTTSSSASYGGGASGGMNSTXSPPSMNNNNNNNSPSIYGSPITHIK
QEIQIPQVTSMTSSPDTSPSPVHLPGMISNPGGNPMGGDTPGSNPIIAQQ
TDPAGGIQWQINAAGKHQDIQSNQGTGKMPAIIREFLASLDDREWQSELY
KLLQSQSFNQVEVDLFELLCKVLDHNLFAQVDWARNSYYFRELKIYIYFI
SVFLILSFLFFLPLEVRNLNNRTHVQECHEQVHRILLEYC
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