EMLSAT00000008902, EMLSAT00000008902-704749 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000008902
Unique NameEMLSAT00000008902-704749
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: developmental defect, Molting, no molting
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
beta FTZ-F1 beta FTZ-F1 both
  1. Nauplius
  2. Copepodid
 Developmental arrest
developmental defect, Molting, no molting 		17.01.2018 - 13:00
24.01.2018 - 13:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s554supercontigLSalAtl2s554:572309..581835 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000008902 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000008902EMLSAG00000008902-691668Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000039551EMLSAE00000039551-748479Lepeophtheirus salmonisexon
EMLSAE00000039552EMLSAE00000039552-748480Lepeophtheirus salmonisexon
EMLSAE00000039553EMLSAE00000039553-748481Lepeophtheirus salmonisexon
EMLSAE00000039554EMLSAE00000039554-748482Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto778663auto778663Lepeophtheirus salmonispolypeptide
EMLSAP00000008902EMLSAP00000008902Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000008902

>EMLSAP00000008902 ID=EMLSAP00000008902|Name=EMLSAP00000008902|organism=Lepeophtheirus salmonis|type=polypeptide|length=540bp
MLPTEPLISIPYSNQRGRFHQPHIQXLPLAAPGSNHRSSSLILIKKEPNM
STSGSLSSGGSPPMVGGTLLPTMDMPIGNSFASLEDLSSVVHPLGLGGGG
PGSGGNPVDSGSNNSPPTLSYSTSPTHNMLGLLPDNNSCNLFNPSAGLPT
ASSNNNSAGSTSGDFGPGVVGQSDQPDSKDGMEELCPVCGDKVSGYHYGL
LTCESCKGFFKRTVQNKKVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVG
MKLEAVRHDRMRGGRNKFGPMYKRDRARKLQVLRQRQVIHGGVSMGPSSM
NNTXTTTSSSASYGGGASGGMNSTXSPPSMNNNNNNNSPSIYGSPITHIK
QEIQIPQVTSMTSSPDTSPSPVHLPGMISNPGGNPMGGDTPGSNPIIAQQ
TDPAGGIQWQINAAGKHQDIQSNQGTGKMPAIIREFLASLDDREWQSELY
KLLQSQSFNQVEVDLFELLCKVLDHNLFAQVDWARNSYYFRELKIYIYFI
SVFLILSFLFFLPLEVRNLNNRTHVQECHEQVHRILLEYC
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mRNA from alignment at LSalAtl2s554:572309..581835+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000008902-704749 ID=EMLSAT00000008902-704749|Name=EMLSAT00000008902|organism=Lepeophtheirus salmonis|type=mRNA|length=9527bp|location=Sequence derived from alignment at LSalAtl2s554:572309..581835+ (Lepeophtheirus salmonis)
CTGTGAACTCCCGTTTTTTTCATTTTATTTTTTTTAGTTATATGCTATTC
TATCGATCTACTGCTGCTGATAGTAGACTTTTTGTACATACAAACAATTC
GTTAGAGATTCGTGCAGATTTTTTTTTTGACTTGAAGGAAGATCCACAAA
TATTTATTTATTACAACATATATTTAAAAAAGAAAAAAAGAGAAAAGAAA
CGGAGAAACAGAGAAGGGAATAAATAAAGTAATTTTGACCTAGATATCGG
TGTGTTTAACTCAATTTGATACTACTCTGATTATTATTGAATCTATCATG
AAGTACGAAGTGAGACCCTAACTTATTTAATATATCTGCTGCGTCTTCTG
CTATTACTTCAAGAACAACAACATCTTCAAACCGGTGAAGGAAACTCTAC
ATATAAGAACGAAATCCACATTTTGTTAATTGAGGACAACAACGACGACT
CTACTATACTCATTAGCTATACATTGTGTGGATTTCGAAAAGAGACGCGG
ACGATAAGGAGCAGGGAATTTGTGATTTCGAAAAAAAAATAGTAAAAATG
TGCCATGGTGGTTTGAGATGACCAAATACATTTATAAGGGCAAGTTACGT
GAAAAAGGCCCTTGAATGTTACCCACGGAACCTCTTATTAGTATTCCGTA
TTCTAACCAACGTGGACGTTTCCATCAACCCCATATTCAAGASCTGCCTC
TCGCAGCCCCGGGTTCTAATCATAGATCATCATCCCTGATCCTTATAAAA
AAAGAGCCGAATATGAGCACAAGTGGAAGCTTGAGTAGCGGTGGTAGTCC
TCCCATGGTTGGAGGAACACTCCTCCCAACCATGGATATGCCGATCGGAA
ACTCATTTGCTTCCTTGGAAGACCTGAGCAGTGTAGTCCATCCACTCGGC
CTCGGAGGGGGTGGACCTGGGTCAGGAGGAAATCCTGTTGACTCCGGCTC
TAATAACTCTCCCCCAACATTGTCGTATTCCACAAGTCCTACACACAACA
TGCTAGGCCTCCTACCTGATAATAATTCCTGCAACCTTTTTAACCCTTCA
GCAGGACTACCAACAGCATCCAGTAACAACAACTCCGCTGGATCCACATC
CGGAGACTTCGGTCCTGGAGTTGTGGGTCAATCCGATCAACCGGATTCTA
AAGACGGTATGGAAGAATTGTGCCCTGTTTGCGGGGATAAAGTCTCAGGA
TATCACTATGGACTCCTCACCTGTGAGTCCTGTAAAGGATTCTTCAAACG
AACGGTTCAGAATAAAAAAGTTTATACTTGCGTTGCGGATCGAAGCTGTG
TCATCGATAAAACGCAACGGAAAAGATGCCCTTACTGCCGCTTTCAAAAG
TGCTTAGATGTTGGAATGAAACTCGAAGGTAAGAAAAACTTCTTCTTCTT
TTCTTTTTTTGAAAATATATTATGCTCTGATTTAAACATTATAACCAACC
ATTTATTTGAATCAAAGTCTTCAATTCTTTGATCCTTGGTGTTTTTTTGT
TTTTTTTGCTTGTTTTTCTTTTCTCTTCCCTTCCTATTTTTTTTCTATCA
AAGAAGCAGAATCCCCCAAACGAGATCCATCTCAAAAGATTTACTAATAA
GTGAACCTTTCTTAATCATGACTCATCCAAGCACACCAATAACCGGATAT
TAAAATTCCACCATCTCTTTTTCCCTCTCTCCTCCTCCTCCTCCTGTTTC
AAGTATGTCATGACGGATTTATAACGTTAGAAATATATCCTTTTCTCCTT
TGTTAAAACTACTACTTCTTTGAGTCTATATACCTTAAGAAACAGTCCAT
TGCGGAGAGAACTTTTTTTTTACTTGCATTGTGGTGTATATATATATATA
TATAATTTCAGTACAGAAATATCATTGAGTAATTAGTTTCTTTTTATATA
AAAAATCAAAATAGGGAATTAACTTCCAACTTTGGAGGGGTAGGTCACTT
TAGGGGATGACCCAGAAAGAAGAAAATGATGATGCATTCAGGGTGGGTTT
TTTTAAAGGTCGTTGCACTTTTTATGATGATTTTTATTATTTTCTACTGT
AACAAAAAAAAAAACACACATTAAAAAACGTTTTTTCTTTTTAAAGAAAA
AAAAAAAACGATCCAAAACCTTCCCCTGCTTCCTCCACCCCAAAATAGCT
TGGAGAAAATTGTATTTTCTTTTTCTTCTTGGGTAGCTTGGTTTTTTATT
ATTTTTCTTCCTTTAAATGACCCAAATTTTTAAAGGGAAGAACGACGAAG
ACCTAGGGGGAAGGGGGAAAAAAAAGCATTATTCCACACATATATATAGC
GTCAGTAGTATTTAAAGAAAGAAAAAAAGAACAAAGTCATGGTGAAAATC
CTGGTGCAAGCCTTATTATATTTTTTCCCCGATTTTCAATTCATACAAAG
AAATGGTTTTTTCCTTTTTTTCCCCTTCTTCCCAGTTACATATCCGCTTT
GAAGCGCAAAAACGTGGAGTGTTTTTATTCATTAAATAATTTTTATTATT
TAATCCAAATTCTTAATTATTTACAAATGAAAAACACCTATTAAGKAAGG
CCCAAGAAAGCGGTGCTTAAGGTATATATTCTATACCCCCCCCCCATTTT
GAAAGTATATAGGGGTCAAGGACGTTAGGGTGCAATTTTGGCGGGAATAG
GGATGCTTATTTATTCAATGGATTCTTCTACTTTTTTTCCCGGGATGTTT
GTCCTATTTCTTCTCCTTTATTGTTATGTCGTTGAGAATTGTTGCTTTTT
TTCCCTGCTTTATATATTTAAGAAGAGGGGTGGGTGAGGGGTATGTAGTA
ATAATAGGGGGGGGGGTATGAGGAAAGTAGAGCAGTCAATAGCACCACTT
TTTGGGGGGGAGGGGGTAGACGAAGAAGAAGCACTTTACACAACGGCCTT
GAAGGGAAAATATATATGTAGTAGGAGAGGAGGATGAGGTGGTGCATTAA
TAGTACAAGTATGACTTACTAATAAGTCAGTCATAACTCACTCACTCACT
CACTCATGTAAAGGAATTATTCTCATTGCACTAAGGCATATGCAATAGTT
TTTAGGGGTGGGGTGGGGGGTTGAAAGCTCTCGAGTCATTATGAACCCCA
GATTTGAGGACATGATTCGGCCCTAACTAATTGTCCATTGTATTCGACTC
AAATGACTATTGCAAAAATAGCTATTTATCGTTACCATGTGCGACGACTC
CTGCTGATGGTGGTGAGTTGGATAGAAAATATAAAAAAAAACGCGACCAA
AAATAGAGAATAATAAAGTAGAGACGATGAGGACTACACGAAGAAGAAGC
AGAGTTATTATACAAATAATAAAAAAATACGAAAAATAAAAGTGAAAGTA
TAACTTACATACATAAAATAACTAAGTGTATATATTTATATATATATATT
TTACGCCAAAATCCGAGCGCTCCCTCTTTTAATTTCTTCTGCTTATGAAA
TCTCGTCTGTTAGGAGCGCGCCCTCCTTTTTTTTACATATATATATAAAT
ATTATTTTATTCCCCTTCTTCGTCGTCTTTAGTATGTTTTAGAAACTAGG
CCAAGGACGATTATGGGCCTACTCCTGATTGCAAATGAAGGAAGGAAATA
ATATAATACGAGGGAATCCTCATATTATTGATATTCATAGATATATATAT
ATATATAAATATCTTTGACAATAGTAGTATTTCTTGAGTTGGGTGGACGG
AAATTGGGGTCAATGGTAGTATAGAGTTCTGCTGTCCCTATGGGCTATCT
CTTACGACCCCTCTCTCATAGTCATCACTACTATGTACCTCCTCTCAAGT
AATAAAATAAAATAAAAAACACTCACAAAAGAGAGGGATGAAAACAATGG
GATATCCCAAGGTCATTGTAGGAAAAGAGAGAATAGGTCGTCGACCAACC
CTAGGATTCAAGTGGTAGTAGTAGTAGTAGTAGTAATACTCAACCCTCCT
CCACTTACAAAAGAAGACACAGAGAGAAAAGAGATTGACCTGAAAAGCAC
AGGTTATCATCATCATCCTATTAGTTACTACATACTATCGTCATCCTCTT
TCTTTCTGATGTCTCTTCATCTTATCTTTATACTACTAAGGGTGTATTTG
AGCGATGCTATGACCTTCAATTCAACAAAGTTTCCTTTTTGTCTGTACAT
ATATATATATATAGTYTGGGGGGGGGGGGKGATCTTGCGATTTCAGAGAG
TGTATCCATATCAATTTGTATGCCTTCTTAATAAAGATATGATAGAACGA
TGATATTTTTTTGTACATATGTAAGTAATGTAGGGAGATTTGTTTGCATG
TCAAGTAGGACAGAAAGTAGATGATGGTTTAATAGATTTGAAATTAATCT
TTATATATATATTTTTCAGCCGTTCGTCATGATCGAATGCGCGGAGGGAG
GAACAAATTCGGGCCCATGTACAAACGTGATAGGGCACGGAAACTGCAAG
TCTTGCGTCAAAGACAAGTGATACACGGTGGAGTTTCCATGGGCCCAAGT
AGCATGAATAATACGMCAACCACAACGAGTAGTAGTGCATCCTACGGCGG
CGGKGCCTCCGGTGGAATGAACTCCACGAGKAGCCCTCCATCCATGAACA
ATAATAATAATAACAATTCCCCCTCAATCTACGGCTCACCCATCACTCAT
ATTAAACAAGAGATACAAATACCACAAGTCACATCTATGACGTCTTCACC
AGATACTTCACCCTCTCCCGTTCATTTACCCGGAATGATTTCTAATCCTG
GAGGCAATCCAATGGGTGGAGATACTCCGGGCTCCAATCCCATCATTGCC
CAACAGACTGATCCTGCCGGAGGTATTCAATGGCAGATCAATGCTGCTGG
AAAGGTTTGTCATAAATACTCAATCAAAACAACACTCTATCATCATCTTC
TTACTTTTCAGCATCAGGATATCCAAAGTAATCAAGGAACTGGGAAAATG
CCAGCCATCATTCGAGAATTCCTTGCCTCCCTGGATGATCGGGAGTGGCA
ATCCGAGTTATATAAATTACTACAGTCTCAGTCTTTTAACCAAGTAGAAG
TTGACCTATTCGAATTGTTGTGTAAAGTTCTTGATCATAATCTCTTTGCT
CAAGTGGATTGGGCTAGAAATTCATACTACTTCAGAGAACTCAAGGTATG
AATAGAATCTTTATTTTTTTCACTCTTAAATTACCCCTCATTAGCTTTTA
ATTATTAGAAGGAAATTCTTCTTACTCTGCAACCTCCTCTCCTTGCTCCT
TGCTCCTTTATTCTTTAAACAATAAAATAGGGGAAAATATAATAATTATT
AATGATGAATTATTCAAAATATATGTACACTACTTAGTTCTGTAGTGTAT
ATAATATATATATATACNATTTTCTTGTCTCGACGTCTCCTTTTTTTCAC
GATTTTTTTAAAAAGAAAAATTCTTCTTCTGAAATTAGTATTTTTTCACA
AGGCCGTCTAGTATTCCTTCTATGTTTGGATTTTTTAATAATTTTATTTG
CTTGCTCAGCTATTATTATTATTAATGATTTGATTGTTATTATTTTTTAA
CAATAAAATACAATTTCAAGTATTTGAAGAGAAATTGAATAGCGGGAGAA
GGAAAATTATATATATATATACATATATATATTTCTTCATTTACATCAAA
TGAATCCTCATGGATTTTTCTCCCTTTGTACACAAACTAAATAATCACAC
ATGATTATTTTTTTTAGTTGCCAAGTCAATTATTTTTGTACACATGGACT
TACCATTAATAGTATTCTTACGTATTTCCCACCACCATCAACCTCATCTA
CTTTCACCATGTGTGCTTCGAAGAGTGGCAGSRGCGCCYACTCTTTTYCT
TCTTTYAAGCAAGTCATCTGGGKCATTGTCAAAAGAAAGAGCGCGCACTC
TTTCTCTTTATGTGTATAATACCTATTATAGAAAGAATGAGATAGTTAAC
GCGCGTGCATGCGCGCGCGCGTTAACTATCTACTTTCGCCAGGTACTAAT
ATAAACGACGTAAAGTATGTACGATGATGATCATCACGGTGATGAGTATT
CGTAGTACGGTGATTATGATGAGAGATATTCGTTCGTATTCCTCACTTAG
TCTCTACTTTCGCTTTTTCTTAATACCATCATGGCCATATTGCGATATGT
ATTACATACCTAGAAGATATTATATCTTGATGGCAGGRGCAGATTTTCCT
TCTTTCTATATTTATTTTMCCTTCGTCTTGCTTAATATTCATTTCCCCCC
TCCCCCCCCCTCTTCTTTTTTCCGAAACAAAAGGGTTATTTTGAAATATA
TACTACAAAAGCGTAAAGGGATTTCGCAATATTTCTTTTCTAATTTTTTA
TTTTTTTTTAAATGAACGACCTCGACGTGAAACCTTTTTATTTTATTTTT
TGAATGATCATACATACATATACATATAATAATAACACTATGAACCCCTC
TAATATTTTTCAAATATTTATTTTAAATATGAAAGGAACAAAATACGTCA
CTTCTCCTCCTGCTGGGAGTTTAGTGTTATTAAGAGTCGTTCTCATAGAT
TTGAGTAGTACATTATAGTAGTGTTTTATTTGTTTGACATAAATAAATAT
ATCAAATCGACCACTCTGTTGACATTGACACACTTATCCTAATTAGAACA
CACACTCATCTGCTACTGCTGATGGCGGCTTCCCTCCCAATATATATATA
TAAGCTGTAGTTGTGGAGGTTCTTGATGATGTAAGGAACGTGTTATGACT
TATGATTGATTCTCCCTCCCCTCTTTCTCTTTATAGAAAAGAAAAGTATT
CGTCGTTGTCATAGCACACACAATATCTTTTGTTTGTTTTACTACTACGA
ACGAAAAGGATGAGAAACAGAGTGTGGGAGAGACTGTAAAAATCGTCATT
ATGATAATAATTGGAGAAATGACCTACTTTTAATAGCTTATCATCATATC
ATTGTGTTTCTTAGTAGCTGCATTAATATGTTATTCATTATAGATATCAT
TATAATATTTTCAATAACATGCAAAACTGTGCTTGCTGACCTCCTTTCTT
TCCTCTCGCTTTTATAACACACTCTTGACCTATATATACATATTTGTCTT
GGAAACAATCAAACATGATTAAGAGTGGAGTTGATTGCTGTTTGGAATGA
AAGAACATACTAAAAGTGTTCAGCGCCAGTTTACTTTAATTAGTAGTGGG
GATGTAAGCTACTTTCAATTTCAATATAAATTACATGCAGATATATATAT
GATTCTATTCCAAGTAGCAGTCTCACCATTGCTTACCTCCCCCCCCCCCC
CTTTAAATGTATGTGATGAAAGGAGAAAGCAGTAGGAGAGGGCAGTGTTG
TAATATTATTTAGTGAAAGTAATATGTTTAGTAGAGAGAGAGAGAGATCT
AACTGTTAAACAAAAGTGTTCAAAGATGGAGCTACTACTCGATTGCAATG
ACCTACTTTTCGGGGTTCTCTCATATTTGTTGTATGTATATCATTTTCCC
CCTTGTTTCACTTTCGTTAGTTGGAGTACTAATAAGAATATATATGTTTT
ACAAAGAGCCTGCTTTCTTTCCCCTACTTTGCTAATCAATTGAAAATAAA
CTTACAGACTACAACTATATTGAATAGTTATATGTTCATTCAAATCACCT
CAAATCGATTTCAACACCTCAAAAATGCATTTAATTGCTTTTTGCATCTG
TATGTCATTGTACAAACTACTTCAAAGTTGTAGATGAAATCCCCACCAGG
GGGATTCCTGTTGTTTTTGTCAATAAGAAAAAGTTATTTTCTATTTTCGA
ATTCGTTTTTTAAATGTATTTTATTAAGTTTGCGGAGAGGACCACTACGG
TCGTGTCCGCAAGAATGTTGCTACTCTTGATTTGTTTTTGACAGATGGGA
TGTTCTGTCAGTACAGTCTTATGACCGGTACTTGGGAGGACTGTCTGTAT
TATTTTTAGAAAGGATATGCAAGACTGAATTGGAGTGAACTGTAGTAGGT
AGGACGTCTTTTGGTATTTAAGTAAATGGTCAGAATAAATCAATTGCCCG
TAAAGCTTTTGGAAGGGTGTTGTACTTCATAATGGAGAATTTAGGTACAC
ATAACTATTTTAGCAGTTTAAACAATGTTTGTAAAGTATATCAAGAATGT
TCCTTTACATTTTTCACCATCAAAAAAAGAAACAACAACAACAAAACGTC
ATAGCTTCATATCTGTCCAAAACAAACTACCAACGAGGGATATTTGTGGA
CATTGCCACAAAAAAATTAATTAAATTTCAAATATTTCATTTTCTAGTAA
GAGTACAAAATTATTTCATTTTATTGGGGGGAGGCTACAGCCCCTGCGGA
CCCCAATGGTTAAGCCCCTTAAGATGATGAAGCGGGAATATAATACTTAT
TAAAGAATATGTATTCCTTGTCTCTCGACTTCCTTTCTTGTATGTTATAT
ACATCTATATTTAGGTCACTAGGTCTTGACGAATAGAGAGAGACAAGGCA
GATTGGCGGRTTTGGTGCCTTCCCTTGGCGTGGGCCTCTTTCTCTCTTCC
CACTCCACCTTTTTCTTCTCCGTACATTCTTATACATAACATATTTTGAA
GGAATGTTTAAGATACTCTCAAACAGCTAGTTCCCTCAATCCCTTCTTAT
CATATTTAATTGAGAGGGATGATTCATTAATTATGTTTGTATTCAACTAT
TCAAATTATGTTTGTATATTAAAGGGGGTTATTATTATTTATATATCTAC
ACTTTAAATGTTTAGTACATTTGCTATTGAGGAGGTAAGCCGCTCGCTTT
TCAAATTAAGATATGTATATTATGTGTATAGAATATACATCTCATCGCTC
CCAAATTGATCTTGACCTAGTTTTTTTGTTTTTGTTTTTTTCATACTTCA
TTTTGTATGAATGTCCTCGTCTATTTTCAAGTTACTTTCGCAATACTTAC
TTTCAGGGGCGTCCGCAGGATAATATTTTTTTGGGGAGCTTGGTTTTCGG
AAATTAAATTTTCTGAAGAAAATGACATATAATTTTTTAGTGTAGGCTGT
GTAGGTGTAGTGTGGATACAACCTCAAAAATGTATATTGAATTAAATATA
ATATGTACTATATATTTATTTGTAGGTGGATGATCAAATGAAACTCCTTC
AGAATTCATGGTCGGAAATGTTGATATTAGATCAAATTCATCAGAGAATG
CACAATCACCTACCGGACGAAACACCATTACCCAATGGGCAAAAATTCGA
ACTTCTTTCATTGGCCCTCTTGGGTGTACCATCCATGTCCGACTCCTTCC
AAGAAATTACCAATAAATTACAATCTTTAAAATTTGATAGTGCAGACTAT
GTCTGCTTAAAATTCGTACTTTTGTTAAACCCTGGTAAGATTTATATATA
CTTTATAAGTGTTTTTCTTATATTATCATTCTTATTTTTCCTCCCTCTAG
AAGTACGAAATTTGAACAATCGTACTCATGTTCAAGAATGTCATGAACAA
GTCCATCGAATACTATTAGAATACTGT
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