EMLSAP00000008980, EMLSAP00000008980 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000008980
Unique NameEMLSAP00000008980
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length513
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSMARTSM00192LDLacoord: 116..155
e-value: 3.2E-7
score: 40.0
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPFAMPF00057Ldl_recept_acoord: 121..153
e-value: 2.1E-6
score: 27.4
IPR002172Low-density lipoprotein (LDL) receptor class A repeatGENE3D4.10.400.10coord: 121..153
e-value: 8.9E-8
score: 31.4
IPR002172Low-density lipoprotein (LDL) receptor class A repeatPROSITEPS50068LDLRA_2coord: 116..154
score: 11.688
IPR002172Low-density lipoprotein (LDL) receptor class A repeatSUPERFAMILY57424LDL receptor-like modulecoord: 120..153
IPR002557Chitin binding domainSMARTSM00494ChtBD2coord: 33..99
e-value: 9.1E-7
score: 38.5
IPR002557Chitin binding domainGENE3D2.170.140.10coord: 33..102
e-value: 4.4E-10
score: 38.6
IPR002557Chitin binding domainPFAMPF01607CBM_14coord: 35..97
e-value: 2.8E-8
score: 33.4
IPR002557Chitin binding domainPROSITEPS50940CHIT_BIND_IIcoord: 32..99
score: 11.731
IPR002557Chitin binding domainSUPERFAMILY57625Invertebrate chitin-binding proteinscoord: 35..101
IPR002509Polysaccharide deacetylaseGENE3D3.20.20.370coord: 191..281
e-value: 1.6E-5
score: 23.5
coord: 9..31
e-value: 1.6E-5
score: 23.5
NoneNo IPR availablePANTHERPTHR11177:SF8DI-N-ACETYLCHITOBIASEcoord: 72..512
NoneNo IPR availablePANTHERPTHR11177CHITINASEcoord: 72..512
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.823
NoneNo IPR availableSIGNALP_GRAM_NEGATIVESignalP-noTMSignalP-noTMcoord: 1..20
score: 0.632
IPR011330Glycoside hydrolase/deacetylase, beta/alpha-barrelSUPERFAMILY88713Glycoside hydrolase/deacetylasecoord: 203..445

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000008980 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000008980EMLSAT00000008980-704827Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000008980 ID=EMLSAP00000008980|Name=EMLSAP00000008980|organism=Lepeophtheirus salmonis|type=polypeptide|length=513bp
MKMFARFLILALSFEFIVGANNNVPSSEEAIEELCSGRPSSEYFRLSTDG
DCRAVYRCDSHGVGGSEVRLAEVKCPSGLSFDIGRQTCDWKNNVYDCDQL
SKPRLSKPKLVTLEPLCSEGEDYIQCGSGECKIKTAYCDGTPDCNDGSDE
NVCSFNEDPNKVAECDLSQCVLPDCYCSADGTRIPGNTGEEDATDVNQTP
QMIVLSFNGAVTGINAGIYDKIFNEERVNPNGCSVKGTFFVSHKFTNYSA
VQELHRRGHDIGVFSISNKDNTKYWTEPEYDDWLSEMAGGRLIIESFSNI
TDGKYIQTYNIYECTLAFKESNHLFSYQDGHCPSRAYPIWELPINELDRR
DDPDFDEILTGCSLVSSCSNIYEADQFKRLLQHNFNRHYSSNRAPLSLSF
DASWLQSKKGFVNTLTKWMDETLSEKNDVYFVSQIQVIQWMQNPTTVTSL
REFEEWKTACKVGGQPLCSLPNPCPLTTRELPGEVHRLHTCMSCPDNYPW
VLDPTGKGFSLKK
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