EMLSAP00000009081, EMLSAP00000009081 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000009081
Unique NameEMLSAP00000009081
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length330
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015880Zinc finger, C2H2-likeSMARTSM00355ZnF_C2H2coord: 303..325
e-value: 3.8E-4
score: 29.8
coord: 247..269
e-value: 0.0017
score: 27.6
coord: 219..241
e-value: 0.011
score: 25.0
coord: 275..297
e-value: 4.9E-4
score: 29.4
coord: 191..213
e-value: 0.0046
score: 26.2
IPR003656Zinc finger, BED-type predictedSMARTSM00614ZnF_BEDcoord: 288..328
e-value: 0.16
score: 11.8
coord: 174..216
e-value: 0.12
score: 13.0
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 192..220
e-value: 6.8E-13
score: 47.9
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 221..240
e-value: 7.3E-14
score: 50.8
IPR013087Zinc finger C2H2-type/integrase DNA-binding domainGENE3D3.30.160.60coord: 269..293
e-value: 1.9E-15
score: 55.6
coord: 241..268
e-value: 5.3E-15
score: 54.2
coord: 294..327
e-value: 4.2E-15
score: 54.5
NoneNo IPR availablePFAMPF13465zf-H2C2_2coord: 206..229
e-value: 4.2E-8
score: 32.9
coord: 233..257
e-value: 7.2E-8
score: 32.2
coord: 263..285
e-value: 1.9E-7
score: 30.9
coord: 290..313
e-value: 5.3E-8
score: 32.6
NoneNo IPR availablePANTHERPTHR24402FAMILY NOT NAMEDcoord: 27..325
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 227..284
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 192..241
NoneNo IPR availableSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 269..321
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 193..213
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 221..241
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 305..325
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 249..269
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 277..297
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 303..330
score: 11.676
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 191..218
score: 15.043
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 219..246
score: 16.498
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 275..302
score: 17.08
IPR007087Zinc finger, C2H2PROSITEPS50157ZINC_FINGER_C2H2_2coord: 247..274
score: 16.061

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000009081 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000009081EMLSAT00000009081-704928Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000009081 ID=EMLSAP00000009081|Name=EMLSAP00000009081|organism=Lepeophtheirus salmonis|type=polypeptide|length=330bp
MADVLLSLKNPVVHPESPPPDSHWSPPFDTEAQLPVTTSLQESNSLYTTS
TYGETPWASPHHAHMSHQQQHDFFPGTMNTNNNWNSQYPTSGNHCGXSSS
SSTSSTSSAIHVNNNTHSGYYNGSLLYGESTMXSKEEEYPEKRRSLGGEQ
PHQFPYINSRGGNRCYVSSFEDRKILKNPSSPDSSTDNTKNVCGICGKTY
ARPSTLKTHMRTHSGERPYRCYDCDKSFSQAANLTAHCRTHSGEKPFHCS
ICNRKFSQSSSVTTHMRTHSGERPYRCRMCKKAFSDSSTLTKHLRIHSGE
KPYQCKLCHLKFSQSGNLXRHMRIHAQNGR
back to top
Add to Basket