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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR001507 | Zona pellucida domain | SMART | SM00241 | ZP | coord: 1217..1463 e-value: 1.1E-6 score: 14.8 |
IPR001507 | Zona pellucida domain | PROSITE | PS51034 | ZP_2 | coord: 1217..1467 score: 24.96 |
IPR003609 | Apple-like | SMART | SM00473 | PAN_AP | coord: 28..114 e-value: 0.022 score: 23.9 coord: 218..296 e-value: 1.9 score: 8.6 coord: 494..575 e-value: 0.0043 score: 26.3 coord: 408..489 e-value: 7.9E-6 score: 35.4 coord: 1035..1116 e-value: 2.8E-7 score: 40.2 coord: 633..714 e-value: 0.0026 score: 27.0 coord: 1121..1200 e-value: 7.1E-9 score: 45.5 coord: 719..798 e-value: 2.9E-10 score: 50.1 coord: 319..395 e-value: 0.0029 score: 26.8 coord: 806..889 e-value: 2.1 score: 8.1 coord: 943..1028 e-value: 0.58 score: 13.7 coord: 131..213 e-value: 3.7E-10 score: 49.7 |
IPR003609 | Apple-like | PROSITE | PS50948 | PAN | coord: 715..799 score: 10.247 |
IPR003609 | Apple-like | PROSITE | PS50948 | PAN | coord: 939..1029 score: 7.256 |
IPR003609 | Apple-like | PROSITE | PS50948 | PAN | coord: 128..214 score: 10.358 |
IPR003609 | Apple-like | PROSITE | PS50948 | PAN | coord: 310..396 score: 8.166 |
IPR003609 | Apple-like | PROSITE | PS50948 | PAN | coord: 631..714 score: 7.368 |
IPR003609 | Apple-like | PROSITE | PS50948 | PAN | coord: 498..576 score: 8.903 |
IPR003609 | Apple-like | PROSITE | PS50948 | PAN | coord: 406..490 score: 9.338 |
IPR003609 | Apple-like | PROSITE | PS50948 | PAN | coord: 1034..1117 score: 11.035 |
IPR003609 | Apple-like | PROSITE | PS50948 | PAN | coord: 221..297 score: 7.287 |
IPR003609 | Apple-like | PROSITE | PS50948 | PAN | coord: 1124..1202 score: 10.004 |
IPR003609 | Apple-like | PROSITE | PS50948 | PAN | coord: 807..890 score: 8.176 |
IPR003609 | Apple-like | PROSITE | PS50948 | PAN | coord: 26..115 score: 8.671 |
None | No IPR available | GENE3D | 3.50.4.10 | | coord: 1140..1194 e-value: 1.3E-6 score: 27.7 coord: 1040..1116 e-value: 2.1E-8 score: 33.4 coord: 405..485 e-value: 4.1E-5 score: 22.9 coord: 514..576 e-value: 9.3E-5 score: 21.7 coord: 638..713 e-value: 1.5E-7 score: 30.7 coord: 724..798 e-value: 1.8E-6 score: 27.2 coord: 146..196 e-value: 8.6E-7 score: 28.2 |
None | No IPR available | PANTHER | PTHR22963 | ENDOGLIN-RELATED | coord: 358..1660 |
None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..24 score: 0.81 |
None | No IPR available | SIGNALP_GRAM_NEGATIVE | SignalP-noTM | SignalP-noTM | coord: 1..24 score: 0.635 |
None | No IPR available | SIGNALP_GRAM_POSITIVE | SignalP-TM | SignalP-TM | coord: 1..26 score: 0.459 |
None | No IPR available | SUPERFAMILY | 57414 | Hairpin loop containing domain-like | coord: 1039..1117 |
None | No IPR available | SUPERFAMILY | 57414 | Hairpin loop containing domain-like | coord: 62..116 |
None | No IPR available | SUPERFAMILY | 57414 | Hairpin loop containing domain-like | coord: 408..490 |
None | No IPR available | SUPERFAMILY | 57414 | Hairpin loop containing domain-like | coord: 818..872 |
None | No IPR available | SUPERFAMILY | 57414 | Hairpin loop containing domain-like | coord: 136..214 |
None | No IPR available | SUPERFAMILY | 57414 | Hairpin loop containing domain-like | coord: 638..715 |
None | No IPR available | SUPERFAMILY | 57414 | Hairpin loop containing domain-like | coord: 343..397 |
None | No IPR available | SUPERFAMILY | 57414 | Hairpin loop containing domain-like | coord: 495..576 |
None | No IPR available | SUPERFAMILY | 57414 | Hairpin loop containing domain-like | coord: 1124..1196 |
None | No IPR available | SUPERFAMILY | 57414 | Hairpin loop containing domain-like | coord: 721..799 |
None | No IPR available | TMHMM | TMhelix | | coord: 7..29 |
None | No IPR available | TMHMM | TMhelix | | coord: 1598..1620 |
IPR003014 | PAN-1 domain | PFAM | PF00024 | PAN_1 | coord: 406..490 e-value: 3.0E-9 score: 36.4 coord: 820..873 e-value: 1.2E-5 score: 24.8 coord: 662..715 e-value: 9.8E-5 score: 21.9 coord: 500..576 e-value: 3.3E-7 score: 29.8 coord: 1138..1202 e-value: 6.3E-9 score: 35.3 coord: 1034..1117 e-value: 5.8E-14 score: 51.5 coord: 718..799 e-value: 8.2E-11 score: 41.3 coord: 128..214 e-value: 1.8E-14 score: 53.1 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000009200 ID=EMLSAP00000009200|Name=EMLSAP00000009200|organism=Lepeophtheirus salmonis|type=polypeptide|length=1680bp RRRNTWLHCIVGIIINSLIATTNAQCFGGIETYEKTSGRKMNCPNFSCKT RGLLSQPDTSVTRDCINICKQSSSCKAFSVDYKSSRCTSYXRDSTLKGRR QLQPATAINYYEKICLRGVRKEEFDGICNAERGWTFERILDSSLKGFDDK IETGVESKSECARLCLLNQKFLCRSAEYEGASQRCVLSREDRRTQKDAFQ VGGTQGIDYIENQCAKPLTDCSYSSANNGFAVISMDDVLFSRTVSDCQRF CDDARAFQCRSFSQKNDRCYLSGDDSGTLPGIPKPVDPGSVYKEKFALKE IQLYYFIGTCEGGIFTYEKTTGHFLRTAKEEPLFPDTSTPGITEKCSELC TGLDSDCPSFSLDYSGQRCFKLDRNTQIRGDSLAPRDGTNYFEKICLKGF DVRNRCQNKVWAFERVPGKMLDVDPDQIYENISLRRGCEELCLREREFIC RSANYDSITLKCTLSRYDRRMLGTEYKNTSKYSNYLENNCIEPNQITCPY MKIENAYPRYLDEVVRNIKDEVACEVQCSFNEKIICRSFAFYSXASQCFI SGDDIISASEGALQTRPGTDYFQRKCKEGLSHRDNQIDSFPSGSEEIQTT RFDMDFDRNRRPTSATGAMNKRKGKSEERYCSFGRLTYEKTTGYELIRGN PTRLYSERDGGIIEQCASRCDEDADCKGFNMDYNRNECQSLTANSLNNLF NLRTSSGVSYFETTCSGCGLLWTYERFVNKELKVDPKKIQRDVSKNECED LCLSESSFVCKSANYDHVRRDCFLLNVDRFEIDQSLQSKQGVDYLENQCE AIKRRGCDYGPQTKDRYLIYTDKVVKVFSDASCREACSSERSFYCRSYTF LSESRPGRPQCLLSGDNGASSGGDNAFQLSNGALFSELDCSEGFTRPLMN ENRRPIEVGSNPDNTFVTSGGAFGSTTSNSKSNPNPENCRSVGLSTSFEK VMDFTYDRGPEEEFSTSVDIGIIVQCLRECQSRGRLCLAATLRNERGGRQ SCYGLGNSATXXGXXPVXATGVTYFEKICVNRNCRKSWAFTKIPQYEFIG SPNKEVQDVESISDCRNLCLDISSFSCRSMTYNRNTRMCRMTEETRRSSP SEFRPAERGVDYYENECSKIPSNCEYVDNTGMYLPFTDTYISRVSDIEEC RSQCSIQDNYNCRSFNFNSFRKECFLSSDDSVSLPSGLHQDRDFTFSERG GCNNGTKNHVKKDVKVECTPSDMLVNLAFGAEFNGRIYATGNPQACFELG TGQSEMILKIPISSQCGTVQQNPGRYVNHVVIQENPVIMQDTDKTVRVEC AFTAEDQTVSFRPTAGVGGRLESGGGISVTVPFQPTGTNIVTNTAPTPGV RMRVIRRNGETASMVGLGENLQLRIEIDRDSAFGLFARKLEAKTDNGELM NLIDEDGCPINEIIFPALELEGGTRALYANFKAFRFPSTPIVNFIATVQF CQDLCKPMPCSGGSESFGKRRKRSTQDENNKEERSFFPITDEAEGHSVQP RTSNSFANDSSNVQESKKRKTKEDLLPEHIDLGLRLTVGENVLHKPFLPS RHGGGVFPEFPGESQRDSNSQYYPSSSSSVSEVNTEEAEYLCSSQSTVIV AIFVILVFNVLLTAGFILFYRRKRKEWIKGSNNAGPALPPRPSGSVIFKN GRASSGSSGFALTTRQQQRMNSSMSSLPRN back to top
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