EMLSAP00000009200, EMLSAP00000009200 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000009200
Unique NameEMLSAP00000009200
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1680
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001507Zona pellucida domainSMARTSM00241ZPcoord: 1217..1463
e-value: 1.1E-6
score: 14.8
IPR001507Zona pellucida domainPROSITEPS51034ZP_2coord: 1217..1467
score: 24.96
IPR003609Apple-likeSMARTSM00473PAN_APcoord: 28..114
e-value: 0.022
score: 23.9
coord: 218..296
e-value: 1.9
score: 8.6
coord: 494..575
e-value: 0.0043
score: 26.3
coord: 408..489
e-value: 7.9E-6
score: 35.4
coord: 1035..1116
e-value: 2.8E-7
score: 40.2
coord: 633..714
e-value: 0.0026
score: 27.0
coord: 1121..1200
e-value: 7.1E-9
score: 45.5
coord: 719..798
e-value: 2.9E-10
score: 50.1
coord: 319..395
e-value: 0.0029
score: 26.8
coord: 806..889
e-value: 2.1
score: 8.1
coord: 943..1028
e-value: 0.58
score: 13.7
coord: 131..213
e-value: 3.7E-10
score: 49.7
IPR003609Apple-likePROSITEPS50948PANcoord: 715..799
score: 10.247
IPR003609Apple-likePROSITEPS50948PANcoord: 939..1029
score: 7.256
IPR003609Apple-likePROSITEPS50948PANcoord: 128..214
score: 10.358
IPR003609Apple-likePROSITEPS50948PANcoord: 310..396
score: 8.166
IPR003609Apple-likePROSITEPS50948PANcoord: 631..714
score: 7.368
IPR003609Apple-likePROSITEPS50948PANcoord: 498..576
score: 8.903
IPR003609Apple-likePROSITEPS50948PANcoord: 406..490
score: 9.338
IPR003609Apple-likePROSITEPS50948PANcoord: 1034..1117
score: 11.035
IPR003609Apple-likePROSITEPS50948PANcoord: 221..297
score: 7.287
IPR003609Apple-likePROSITEPS50948PANcoord: 1124..1202
score: 10.004
IPR003609Apple-likePROSITEPS50948PANcoord: 807..890
score: 8.176
IPR003609Apple-likePROSITEPS50948PANcoord: 26..115
score: 8.671
NoneNo IPR availableGENE3D3.50.4.10coord: 1140..1194
e-value: 1.3E-6
score: 27.7
coord: 1040..1116
e-value: 2.1E-8
score: 33.4
coord: 405..485
e-value: 4.1E-5
score: 22.9
coord: 514..576
e-value: 9.3E-5
score: 21.7
coord: 638..713
e-value: 1.5E-7
score: 30.7
coord: 724..798
e-value: 1.8E-6
score: 27.2
coord: 146..196
e-value: 8.6E-7
score: 28.2
NoneNo IPR availablePANTHERPTHR22963ENDOGLIN-RELATEDcoord: 358..1660
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.81
NoneNo IPR availableSIGNALP_GRAM_NEGATIVESignalP-noTMSignalP-noTMcoord: 1..24
score: 0.635
NoneNo IPR availableSIGNALP_GRAM_POSITIVESignalP-TMSignalP-TMcoord: 1..26
score: 0.459
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 1039..1117
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 62..116
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 408..490
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 818..872
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 136..214
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 638..715
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 343..397
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 495..576
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 1124..1196
NoneNo IPR availableSUPERFAMILY57414Hairpin loop containing domain-likecoord: 721..799
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 1598..1620
IPR003014PAN-1 domainPFAMPF00024PAN_1coord: 406..490
e-value: 3.0E-9
score: 36.4
coord: 820..873
e-value: 1.2E-5
score: 24.8
coord: 662..715
e-value: 9.8E-5
score: 21.9
coord: 500..576
e-value: 3.3E-7
score: 29.8
coord: 1138..1202
e-value: 6.3E-9
score: 35.3
coord: 1034..1117
e-value: 5.8E-14
score: 51.5
coord: 718..799
e-value: 8.2E-11
score: 41.3
coord: 128..214
e-value: 1.8E-14
score: 53.1

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000009200 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000009200EMLSAT00000009200-705047Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000009200 ID=EMLSAP00000009200|Name=EMLSAP00000009200|organism=Lepeophtheirus salmonis|type=polypeptide|length=1680bp
RRRNTWLHCIVGIIINSLIATTNAQCFGGIETYEKTSGRKMNCPNFSCKT
RGLLSQPDTSVTRDCINICKQSSSCKAFSVDYKSSRCTSYXRDSTLKGRR
QLQPATAINYYEKICLRGVRKEEFDGICNAERGWTFERILDSSLKGFDDK
IETGVESKSECARLCLLNQKFLCRSAEYEGASQRCVLSREDRRTQKDAFQ
VGGTQGIDYIENQCAKPLTDCSYSSANNGFAVISMDDVLFSRTVSDCQRF
CDDARAFQCRSFSQKNDRCYLSGDDSGTLPGIPKPVDPGSVYKEKFALKE
IQLYYFIGTCEGGIFTYEKTTGHFLRTAKEEPLFPDTSTPGITEKCSELC
TGLDSDCPSFSLDYSGQRCFKLDRNTQIRGDSLAPRDGTNYFEKICLKGF
DVRNRCQNKVWAFERVPGKMLDVDPDQIYENISLRRGCEELCLREREFIC
RSANYDSITLKCTLSRYDRRMLGTEYKNTSKYSNYLENNCIEPNQITCPY
MKIENAYPRYLDEVVRNIKDEVACEVQCSFNEKIICRSFAFYSXASQCFI
SGDDIISASEGALQTRPGTDYFQRKCKEGLSHRDNQIDSFPSGSEEIQTT
RFDMDFDRNRRPTSATGAMNKRKGKSEERYCSFGRLTYEKTTGYELIRGN
PTRLYSERDGGIIEQCASRCDEDADCKGFNMDYNRNECQSLTANSLNNLF
NLRTSSGVSYFETTCSGCGLLWTYERFVNKELKVDPKKIQRDVSKNECED
LCLSESSFVCKSANYDHVRRDCFLLNVDRFEIDQSLQSKQGVDYLENQCE
AIKRRGCDYGPQTKDRYLIYTDKVVKVFSDASCREACSSERSFYCRSYTF
LSESRPGRPQCLLSGDNGASSGGDNAFQLSNGALFSELDCSEGFTRPLMN
ENRRPIEVGSNPDNTFVTSGGAFGSTTSNSKSNPNPENCRSVGLSTSFEK
VMDFTYDRGPEEEFSTSVDIGIIVQCLRECQSRGRLCLAATLRNERGGRQ
SCYGLGNSATXXGXXPVXATGVTYFEKICVNRNCRKSWAFTKIPQYEFIG
SPNKEVQDVESISDCRNLCLDISSFSCRSMTYNRNTRMCRMTEETRRSSP
SEFRPAERGVDYYENECSKIPSNCEYVDNTGMYLPFTDTYISRVSDIEEC
RSQCSIQDNYNCRSFNFNSFRKECFLSSDDSVSLPSGLHQDRDFTFSERG
GCNNGTKNHVKKDVKVECTPSDMLVNLAFGAEFNGRIYATGNPQACFELG
TGQSEMILKIPISSQCGTVQQNPGRYVNHVVIQENPVIMQDTDKTVRVEC
AFTAEDQTVSFRPTAGVGGRLESGGGISVTVPFQPTGTNIVTNTAPTPGV
RMRVIRRNGETASMVGLGENLQLRIEIDRDSAFGLFARKLEAKTDNGELM
NLIDEDGCPINEIIFPALELEGGTRALYANFKAFRFPSTPIVNFIATVQF
CQDLCKPMPCSGGSESFGKRRKRSTQDENNKEERSFFPITDEAEGHSVQP
RTSNSFANDSSNVQESKKRKTKEDLLPEHIDLGLRLTVGENVLHKPFLPS
RHGGGVFPEFPGESQRDSNSQYYPSSSSSVSEVNTEEAEYLCSSQSTVIV
AIFVILVFNVLLTAGFILFYRRKRKEWIKGSNNAGPALPPRPSGSVIFKN
GRASSGSSGFALTTRQQQRMNSSMSSLPRN
back to top
Add to Basket