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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| IPR001806 | Small GTPase superfamily | PRINTS | PR00449 | RASTRNSFRMNG | coord: 188..210
score: 48.72
coord: 50..71
score: 50.99
coord: 153..166
score: 37.7
coord: 91..113
score: 57.63
coord: 73..89
score: 34.18 |
| IPR001806 | Small GTPase superfamily | PFAM | PF00071 | Ras | coord: 51..211
e-value: 2.1E-65
score: 218.9 |
| IPR020849 | Small GTPase superfamily, Ras type | SMART | SM00173 | RAS | coord: 47..213
e-value: 4.0E-33
score: 126.0 |
| IPR003578 | Small GTPase superfamily, Rho type | SMART | SM00174 | RHO | coord: 52..216
e-value: 9.4E-13
score: 43.4 |
| IPR024156 | Small GTPase superfamily, ARF type | SMART | SM00177 | ARF | coord: 38..214
e-value: 5.1E-4
score: 10.8 |
| IPR002041 | Ran GTPase | SMART | SM00176 | RAN | coord: 55..256
e-value: 4.0E-6
score: 36.3 |
| IPR003579 | Small GTPase superfamily, Rab type | SMART | SM00175 | RAB | coord: 50..213
e-value: 6.7E-107
score: 371.1 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 42..231
e-value: 2.4E-72
score: 242.0 |
| None | No IPR available | GENE3D | 3.30.60.20 | | coord: 410..441
e-value: 2.6E-10
score: 39.8 |
| None | No IPR available | PANTHER | PTHR24073 | FAMILY NOT NAMED | coord: 43..310 |
| None | No IPR available | PANTHER | PTHR24073:SF24 | SUBFAMILY NOT NAMED | coord: 43..310 |
| None | No IPR available | PROSITE | PS51419 | RAB | coord: 45..249
score: 37.448 |
| IPR001267 | Thymidine kinase | PFAM | PF00265 | TK | coord: 277..441
e-value: 5.6E-63
score: 211.5 |
| IPR005225 | Small GTP-binding protein domain | TIGRFAM | TIGR00231 | TIGR00231 | coord: 48..203
e-value: 1.6E-30
score: 103.9 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 45..216 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 277..409 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000009511 ID=EMLSAP00000009511|Name=EMLSAP00000009511|organism=Lepeophtheirus salmonis|type=polypeptide|length=441bp
KSVRFGSSGPGSSSFFTLSYFLIGGGNLLDPSYAPCYTDIEMAKTYDYLF
KLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKL
QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEH
ASADVEKMILGNKCDINDRRKVTKEKGEDLAIEYGIKFMETSAKSSINVE
EAFFTLARDIKAKMEKRLEASNPPRQDRGHQLGKDDGRGRNIMQWFSRCS
ILSNNMRDIINISQGSQFCVSKKMLPAQIQLIIGPMFSGKSTELIRRLKR
YQIAKYKCLNIKYAKDTRYDSNAISTHDRIVLDAVSSLSLDTLKERAMDF
DVIGIDEGQFFPDIVSFCETMANSGKIVVIAALDGTFQRKGFPNIMELVP
LSESVTKLNSVCMICYGEGSYTKRTTNEKEIEVIGGTETYM back to top
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