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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001841 | Zinc finger, RING-type | SMART | SM00184 | RING | coord: 178..215
e-value: 2.0E-6
score: 37.3 |
| IPR001841 | Zinc finger, RING-type | PFAM | PF13639 | zf-RING_2 | coord: 176..216
e-value: 9.6E-12
score: 44.4 |
| IPR001841 | Zinc finger, RING-type | PROSITE | PS50089 | ZF_RING_2 | coord: 178..216
score: 12.106 |
| IPR011016 | Zinc finger, RING-CH-type | SMART | SM00744 | RINGv | coord: 177..216
e-value: 0.0055
score: 9.4 |
| IPR025754 | TRC8 N-terminal domain | PFAM | PF13705 | TRC8_N | coord: 1..147
e-value: 6.1E-57
score: 193.2 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 172..221
e-value: 1.4E-15
score: 55.9 |
| None | No IPR available | PANTHER | PTHR12477:SF9 | SYNOVIOLIN 1 | coord: 1..215 |
| None | No IPR available | PANTHER | PTHR12477 | SYNOVIOLIN-RELATED | coord: 1..215 |
| None | No IPR available | SUPERFAMILY | 57850 | RING/U-box | coord: 168..220 |
| None | No IPR available | TMHMM | TMhelix | | coord: 20..42 |
| None | No IPR available | TMHMM | TMhelix | | coord: 98..120 |
| None | No IPR available | TMHMM | TMhelix | | coord: 49..71 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000010031 ID=EMLSAP00000010031|Name=EMLSAP00000010031|organism=Lepeophtheirus salmonis|type=polypeptide|length=260bp
MVAPVLISLTISQNYDSRKHLRALSTCVFLIGSALSLLLYLWDSFSCGTW
LFAVSAFCIEVIIKIFISLLIYCLYLYDQFGNENWEKFDDVVYYVKAVGN
SIEFFFAVCLFINGGWIFFFESRGAVRAMMMGIHAYFNIWCEAINGWESF
RKRRTASTKLSSLVIASERLVKSRNDVCAICLMEMKVARVTSCDHLFHSH
CLQRWIYVENTCPLCKTVLFGEDGALLQLLRHSFPSERLTPSSPVHVNFE
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