EMLSAP00000010305, EMLSAP00000010305 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000010305
Unique NameEMLSAP00000010305
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length487
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353HLHcoord: 7..60
e-value: 1.6E-5
score: 34.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 9..53
e-value: 1.6E-4
score: 21.1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 1..54
score: 13.713
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 8..56
IPR000014PAS domainSMARTSM00091PAScoord: 182..251
e-value: 2.8E-5
score: 33.6
IPR000014PAS domainPROSITEPS50112PAScoord: 198..238
score: 10.554
IPR000014PAS domainSUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 197..248
NoneNo IPR availableGENE3D3.30.450.20coord: 194..246
e-value: 2.7E-10
score: 39.1
NoneNo IPR availablePANTHERPTHR23043:SF3SINGLE-MINDED 1coord: 5..246
NoneNo IPR availablePANTHERPTHR23043HYPOXIA-INDUCIBLE FACTOR 1 ALPHAcoord: 5..246

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000010305 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000010305EMLSAT00000010305-706152Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000010305 ID=EMLSAP00000010305|Name=EMLSAP00000010305|organism=Lepeophtheirus salmonis|type=polypeptide|length=487bp
MKQDKSKNAARNRRERENGEFFELGKLLPLPXAITSQLDKXSIIRLTTSY
LRMRQVFPDGLGDGWGLKPSINKQPEILKELGSHLLQTLDGFIFVLSADG
KIILELEMEKSFVLRMKCVLAKRNAGLTSGGYKVIHCRGYLKIKRINGSD
SSSNTSSSSSPSLISESSKFANIGFVAVAHSLPPSSITEVKMFSNVFMFR
ASLDLKLIFLDQKVLNLTGYEPQDLIEKTLYQYVHGSDMLALRMSHITRN
IIPITLPLLYKREKQEHNLILNQDQLTDLVPSYNSWIPSRLDQSQCTIQQ
GQQKESSRDIVNSCEGVNSIYLQEIDATTSEFQTDFGSHNVPESSSSSPA
WQYDQCYNNTCXSWSNYYSNRNPPQIQPHLSPTQDQAQMQHKDFFGSLPW
KDLLVNEPRSLSRSSQNSSSSAELDKTMMHHQQMSASSNIVNPSIPSSGI
LTNSDSFDMKPKSVESDYSDIRSTLYLKKMSPTFNGA
back to top
Add to Basket