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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 1662..1711 |
None | No IPR available | COILS | Coil | Coil | coord: 1133..1154 |
None | No IPR available | COILS | Coil | Coil | coord: 1466..1494 |
None | No IPR available | COILS | Coil | Coil | coord: 1079..1121 |
None | No IPR available | COILS | Coil | Coil | coord: 1334..1362 |
None | No IPR available | COILS | Coil | Coil | coord: 1505..1529 |
None | No IPR available | COILS | Coil | Coil | coord: 1438..1459 |
None | No IPR available | COILS | Coil | Coil | coord: 1198..1240 |
None | No IPR available | COILS | Coil | Coil | coord: 973..1008 |
None | No IPR available | COILS | Coil | Coil | coord: 1256..1277 |
None | No IPR available | COILS | Coil | Coil | coord: 1536..1571 |
None | No IPR available | COILS | Coil | Coil | coord: 1585..1639 |
None | No IPR available | COILS | Coil | Coil | coord: 1640..1648 |
None | No IPR available | GENE3D | 3.30.420.40 | | coord: 263..389 e-value: 4.8E-20 score: 70.9 |
None | No IPR available | GENE3D | 3.30.420.40 | | coord: 7..191 e-value: 1.9E-54 score: 183.2 |
None | No IPR available | GENE3D | 3.90.640.10 | | coord: 192..262 e-value: 1.8E-29 score: 101.4 |
None | No IPR available | SUPERFAMILY | 53067 | Actin-like ATPase domain | coord: 7..158 |
None | No IPR available | SUPERFAMILY | 53067 | Actin-like ATPase domain | coord: 151..389 |
IPR004000 | Actin-related protein | PRINTS | PR00190 | ACTIN | coord: 145..164 score: 69.42 coord: 27..36 score: 58.88 coord: 120..133 score: 56.37 coord: 65..87 score: 46.66 coord: 241..257 score: 45.92 |
IPR004000 | Actin-related protein | SMART | SM00268 | ACTIN | coord: 6..392 e-value: 3.7E-179 score: 611.1 |
IPR004000 | Actin-related protein | PFAM | PF00022 | Actin | coord: 7..389 e-value: 3.1E-113 score: 378.0 |
IPR004000 | Actin-related protein | PANTHER | PTHR11937 | ACTIN | coord: 1..401 |
IPR004856 | Glycosyl transferase, ALG6/ALG8 | PFAM | PF03155 | Alg6_Alg8 | coord: 407..871 e-value: 1.0E-135 score: 453.0 |
IPR027306 | Actin-related protein 2 (Arp2) | PANTHER | PTHR11937:SF37 | ACTIN-RELATED PROTEIN 2, ARP2 | coord: 1..401 |
IPR020902 | Actin/actin-like conserved site | PROSITE | PS01132 | ACTINS_ACT_LIKE | coord: 109..121 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000010475 ID=EMLSAP00000010475|Name=EMLSAP00000010475|organism=Lepeophtheirus salmonis|type=polypeptide|length=1732bp MDSQGRRLVVCDNGTGFVKCGFAGKNLPTHVFPSLVGRPMIRALNNRVQD IEVDDIMVGEKVSKLRSMLEVSYPMENGMVRNWEDMKHLWDYTFGPEKLN ITPSESKILLTEPPMNPKRNREKMVEVMFEEYGFNGXFVXIXAILTLYSQ GLLTGIVVDSGDGVTHICPVCRGFDLPHLTRRLDIAGRDVTRYLIKLLLL RGYSFNHTADFETVRILKEKLCYMGYDIAKEEKLARETTFLVERYTLPDG RXINVGGERFEAPEALFQPHLINVEGPGMAELLFNCIQAADIDMRSDLYK HIVLSGGSTMYPGLPSRLZRELRQLYLERVLKGDTSRLAKYKMRVEVPPT RQNSVFIGGAILANIMKDRDNFWIEKSEYEEKGESVINKLAYKIELRMNH LILGLFGLLLRASVSVWPHSGKGSPPMYGDYEAQRHWQEXTLNLPISSWY APGVKGNELNYWGLXXPPLTAYHSYLNGLFARDVLNQSHYVELEKSRGME SPDHILYMRSTVLFADLIILLPALYYAFKGNLLGFGMLITYPGLILIDNG HFQYNNISLGLFIMAXNCIMRXHDXLGSFLFVCALCYKQMELYHALPFFF YLLGSSLKKESFPMGSLKKLIQIGVIVLGSFALIWFPFIDPQQEFKSLKQ VIFRIFPLARGVFEDKVANFWCSLNLFIKVKTIYSQEELMKICAIVTGFV VLPSNVHLFLRPNLRNFLCSLSVTSLGFFLFSFQVHEKSILLAVIPSLIW IYSTRRDSSNAHLXATWLSVISIFSMLPLLKRDGLTIPTLALTLLYIIIS RAFEKPFYKVLDYTWNDFILRFVYGSSLLFVVGLTFAISFIPPPNKYPDL WPVIISLYSCVHFVLFLSYFYYYQFFGHYESEAIKLKKNLIHPYESAWMK WDIFRAFYRSXLPLVEALFNDLLTTTHTLKLHKDKLNAINSSPSNSEESV RTPCKCKPYEDSSCSSLQIPPNLIEYEKKEEDLKNKIRDLEALNSHALNV VSTLQEESLEKSRKLLKLESNKARVVEKNLPSMKPKMEITCYVKENKRKL PPSSSSSTSSSSNEKKFIHIPKEGTLDIVKMFERKNKILNDLIFKAEEEL LSQKQRISELEDQLKRSSRSVHENYHPKSSSYISKILKDNAALREKIKSL EVNPVKSSSCIKSACHHLHHQHRDEENKENFKSRSQVHKHMEDQHVHIHE LEDQLRSSLDEIRELKLRIAHLQTSKKSFKDKVEILQAQQKVLVDSKDAS KVNELVNFMEKQRNIYRDNVHELLEQLNIEGTANKIIPPSKTFVKEVDVI DGICKECRGKKLRKINSINKEDFSETLDKYKACISSLKKEKNDLISRLEE QTSQIKEKECLITSGKDKIEEWKQRAMSATSLEGITQECQYLQTELRSSR DKVVHLSQELRIKDDHLKTLSDEKDEIICLLDDKTICLEKLKEEKMQMIN DLNQLDSEKVSTDHRVAHAMSQLNAIQLELKTHQREKDEFRGKFEREKTV GIQLRRENTDLRMEIENEIKEKEEAQSRESDIKSHIQKYINEVKRIEELL SLCEKERSELLEQYRRLSSDVSTAESYGRRLETQVVSLEMDLKSRETELN AAETRLRNLEKDLAEMSLSNENYRLQLASFTVRADLAEXELKESRNQQSW INKDLSNVHDLAVTLNSQKVELLNKISEQESEINSMSNEIDKLRSELIFL RKEYHEERAKTKNLEGKLSEYSRPGSSSSTYS back to top
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