EMLSAP00000010514, EMLSAP00000010514 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000010514
Unique NameEMLSAP00000010514
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1041
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002126CadherinPRINTSPR00205CADHERINcoord: 425..437
score: 41.43
coord: 223..242
score: 25.27
coord: 620..646
score: 24.5
coord: 801..818
score: 31.08
coord: 575..588
score: 33.03
coord: 556..575
score: 36.24
IPR002126CadherinSMARTSM00112CAcoord: 595..673
e-value: 0.0033
score: 26.7
coord: 84..169
e-value: 4.2E-15
score: 66.2
coord: 706..817
e-value: 0.05
score: 17.1
coord: 271..357
e-value: 6.9E-4
score: 28.9
coord: 197..269
e-value: 0.31
score: 9.0
coord: 379..473
e-value: 1.4E-4
score: 31.2
coord: 496..575
e-value: 3.6E-23
score: 93.0
IPR002126CadherinPFAMPF00028Cadherincoord: 84..162
e-value: 4.2E-10
score: 39.6
coord: 480..568
e-value: 3.0E-16
score: 59.3
IPR002126CadherinGENE3D2.60.40.60coord: 357..465
e-value: 2.0E-8
score: 34.1
coord: 169..249
e-value: 3.1E-6
score: 27.0
IPR002126CadherinGENE3D2.60.40.60coord: 251..356
e-value: 4.5E-9
score: 36.1
coord: 86..168
e-value: 6.7E-17
score: 61.4
coord: 816..880
e-value: 1.6E-15
score: 56.9
coord: 470..573
e-value: 3.1E-25
score: 88.3
coord: 574..676
e-value: 6.1E-15
score: 55.1
coord: 769..815
e-value: 5.7E-5
score: 22.9
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 251..359
score: 14.474
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 476..577
score: 22.015
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 376..475
score: 14.386
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 722..819
score: 12.304
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 578..675
score: 14.189
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 820..972
score: 9.147
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 173..250
score: 9.147
IPR002126CadherinPROSITEPS50268CADHERIN_2coord: 86..171
score: 21.38
NoneNo IPR availablePANTHERPTHR24027FAMILY NOT NAMEDcoord: 87..878
NoneNo IPR availablePANTHERPTHR24027:SF1SUBFAMILY NOT NAMEDcoord: 87..878
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.833
NoneNo IPR availableTMHMMTMhelixcoord: 1013..1035
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 807..817
IPR020894Cadherin conserved sitePROSITEPS00232CADHERIN_1coord: 347..357
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 347..452
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 463..590
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 807..881
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 565..678
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 86..171
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 165..250
IPR015919Cadherin-likeSUPERFAMILY49313Cadherin-likecoord: 272..365

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000010514 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000010514EMLSAT00000010514-706361Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000010514 ID=EMLSAP00000010514|Name=EMLSAP00000010514|organism=Lepeophtheirus salmonis|type=polypeptide|length=1041bp
MAYXFIICLLLLPIKVYSQGSETIELDPCSILDGGSHLIIAINESLQQDF
SQFSEPEELLISGEIGTEISLKITEDKSRLFKLDASMDADANINGQVEYT
LGDNGDDSPFAIESPYQGLVTLTKTLDYETTQRYFLQIKASDRALNTEDR
FTSTTTLTIKVQDSDDLPPVFNHPEGYTAEVISGYPVSTLHISPEKIHAE
DQDSLRTEVVYSLVDGIPINYDVYFGIDPNSGVISQRQVIDKAQYDRFEI
IDEGAEIGTYVTDINGNRIDFSITDDDIEDGVELQTLDSYDIELTTKYFQ
IDQEGYLIVNQSDIDRDPPFQPVLTFQIFAREKFDSFKSSSPVQLTISIR
DINDNSPVFAPISDITLTAGTTRRIVTHFNATDKDSDKFIVYKLLSVSNN
GRQKFFLNSKTGLLEVIAPIYDGEQYAITVEAKDNGGLSNIAVLRTIRAQ
DNGGKFSTVXLTITVLXEXDNTPEFQNLPFSFRVTEGTLREFVGEVSAVD
VDQSSNGKVFYYLNETEDTFSIEELTGRIYTLKSLDFEEQSVHYLVIGAK
DNGXPALSAXATATILVQDISDETPIFENPLYNISISENNEPELLLTTVQ
PSITYRIITGDRKRFRVNQTTGDVYATHKFDYEKEFYYSLVIGTEEGFFD
GELSGEAVTKVEIHIEDLNDVPPHFVKGFNMSSDGSTKNADKYFGVDPVK
GDILIVGNLTEDIIEEYQLEIVTYSIENPQLQSSILIRVVIKIVTSLYTG
PGLGFEELEVNEKKECDLILNTDEIDRERNDRYEILVELQSRPEFINTDR
NEVHIRVNIQDINDHSPLFEKKRYFGIVKKESLPNTPIVQVEATDRDSGS
NGKILXSFQSMNNETEDLFQIDSESGIISNILELMLTLPKINPTEFESHR
DDLINVLEDTTGYKVGIDRVDTAMIKYLNGTCCTAHYGTDVYFHVIDPIQ
YRILNSTENKVKTNILDSAPKLKEKVSKKLNLRVSDLHLPYNKAIPSTEV
VQKAGNGDELLTYYLIVIGLAVGLFVLTTMAXIYLXCARRR
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