|
|
Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001283 | Cysteine-rich secretory protein, allergen V5/Tpx-1-related | PRINTS | PR00837 | V5TPXLIKE | coord: 245..263
score: 41.88
coord: 303..316
score: 30.98
coord: 365..378
score: 45.56
coord: 331..347
score: 55.23 |
| IPR001283 | Cysteine-rich secretory protein, allergen V5/Tpx-1-related | SMART | SM00198 | SCP | coord: 207..378
e-value: 8.7E-52
score: 188.0
coord: 555..727
e-value: 1.2E-45
score: 167.6 |
| IPR001283 | Cysteine-rich secretory protein, allergen V5/Tpx-1-related | PANTHER | PTHR10334 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED | coord: 546..749 |
| IPR002413 | Ves allergen | PRINTS | PR00838 | V5ALLERGEN | coord: 551..567
score: 51.1
coord: 593..611
score: 58.55
coord: 679..698
score: 61.25
coord: 567..587
score: 52.98 |
| IPR014044 | CAP domain | GENE3D | 3.40.33.10 | | coord: 548..749
e-value: 1.9E-55
score: 187.2
coord: 197..396
e-value: 3.6E-55
score: 186.2 |
| IPR014044 | CAP domain | PFAM | PF00188 | CAP | coord: 215..370
e-value: 1.8E-18
score: 67.1
coord: 562..719
e-value: 3.7E-19
score: 69.3 |
| IPR014044 | CAP domain | SUPERFAMILY | 55797 | PR-1-like | coord: 528..734 |
| IPR014044 | CAP domain | SUPERFAMILY | 55797 | PR-1-like | coord: 177..385 |
| None | No IPR available | PANTHER | PTHR10334:SF57 | CELL WALL PROTEIN PRY | coord: 546..749 |
| None | No IPR available | SIGNALP_GRAM_POSITIVE | SignalP-TM | SignalP-TM | coord: 1..26
score: 0.496 |
| None | No IPR available | SIGNALP_EUK | SignalP-noTM | SignalP-noTM | coord: 1..22
score: 0.715 |
| IPR018244 | Allergen V5/Tpx-1-related, conserved site | PROSITE | PS01010 | CRISP_2 | coord: 365..376 |
| IPR018244 | Allergen V5/Tpx-1-related, conserved site | PROSITE | PS01009 | CRISP_1 | coord: 332..342 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000011068 ID=EMLSAP00000011068|Name=EMLSAP00000011068|organism=Lepeophtheirus salmonis|type=polypeptide|length=750bp
MSLKVCLTLFILGVCVVKQTNGVCKSVNGEICMTKNNQGAAIYFNWFKWE
STCFKYSEQRWCMISLGQLRPCTCENKCCTNNLESGSSGSGGGNSGSSGS
SGETEEKGSESGGSGEGSEGGSSGSSGSSGGTEEGSSESGGSSEVSGACD
STSVKDYKGCKDLKKIYCKLTATQNGVVYKNTLCKYCGENQDTCKGKICA
HGIISKEDQKRIVSIHNKHRSKVALGKEKRGVGGPQPPAANMYRLDWDDE
LAKGAQMWALQCPKGHDKNRITPEFSGENMWVGQNMASAWSSVKSMNRDY
EGMIKGWYDEVKDFPAKNVKHYSTKGATGVVGHYTAMVWGNSVKVGCGYV
MYYDTTQPRYPYKKVLICNYGPGGNILRAKVYEIGKAGSECPNGHKDESN
PSFRNIMNLSWVGLLMLIGFPFVFGICKSRFGTNCMTIDDPGARVYFAYF
NWNSTCFAYQDGHYCMINLGYLQPCDCSQDCGXKESKENVEIEDLKCDSS
SVKDYRGCENIKKIFCPLTAKSNGQTYPNTLCQYCGENRQICGGQICDSD
ILTQGDKDDILKIHNDFRSKVAXGEXXRGXGGXXPPAANMNRLTWDDNLA
LSAQMWALQCPNAHDKNRLTPEFHDHPYVWVGQNLAFLWSSVKSSNRNYE
DMIKGWYNEVSDFPSKNVKNYSNAGAKGVVGHYTTMIWGSTKKIGCGFVH
HYDRTQLNNPYKKTLVCNYGKGGNILGQEVYQIGKPGSKCPKGNEKGLCL back to top
|
