EMLSAP00000011195, EMLSAP00000011195 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000011195
Unique NameEMLSAP00000011195
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length330
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000742Epidermal growth factor-like domainSMARTSM00181EGFcoord: 115..145
e-value: 7.0
score: 15.6
coord: 146..177
e-value: 0.042
score: 23.0
coord: 14..48
e-value: 0.17
score: 21.0
coord: 69..112
e-value: 95.0
score: 4.8
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 1..16
score: 9.067
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 20..48
score: 7.687
IPR000742Epidermal growth factor-like domainPROSITEPS50026EGF_3coord: 112..145
score: 9.478
IPR000884Thrombospondin, type 1 repeatPFAMPF00090TSP_1coord: 279..315
e-value: 0.0052
score: 16.7
IPR000884Thrombospondin, type 1 repeatPROSITEPS50092TSP1coord: 191..269
score: 8.014
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 274..315
IPR000884Thrombospondin, type 1 repeatSUPERFAMILY82895TSP-1 type 1 repeatcoord: 192..240
NoneNo IPR availableGENE3D2.20.100.10coord: 192..268
e-value: 4.2E-6
score: 26.4
coord: 279..315
e-value: 1.5E-4
score: 21.5
NoneNo IPR availableGENE3D2.170.300.10coord: 4..75
e-value: 3.1E-6
score: 26.6
coord: 76..180
e-value: 7.2E-6
score: 25.4
NoneNo IPR availablePANTHERPTHR24044FAMILY NOT NAMEDcoord: 1..177
NoneNo IPR availablePANTHERPTHR24044:SF106SUBFAMILY NOT NAMEDcoord: 1..177
IPR013032EGF-like, conserved sitePFAMPF12661hEGFcoord: 4..15
e-value: 0.013
score: 15.4
coord: 35..47
e-value: 0.038
score: 13.9
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 68..79
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 165..176
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 133..144
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 4..15
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 100..111
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 36..47
IPR002049EGF-like, lamininPFAMPF00053Laminin_EGFcoord: 120..148
e-value: 0.02
score: 14.7

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000011195 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000011195EMLSAT00000011195-707042Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000011195 ID=EMLSAP00000011195|Name=EMLSAP00000011195|organism=Lepeophtheirus salmonis|type=polypeptide|length=330bp
MGICVCQEGWTGAECDECIKKPGCVNGNCKDTPFECLCEEGWTGAECDEX
IKRPGCVNGEXKDMPFGCICMDGWTGFNCDECIKKPGXVNGECNGIPFGC
ECQRGYEGELCNNPICREGCHPQFGTCNAPGQCNCIDGWTGVNCDECIKK
PGCVNGECKGIAFGCDCNDGWAGEFCEKCIKPWICTPKISYGKWSKWNQW
SDCYSKNCHSVGKKWRRRECLFNKTYHKRKPQYGKHYDTQSHHGVYPHKV
KYCHGASIEKQPCSPQYCHKKGHKFHYYWSEWKPCTAQCKGHIGVRHRVK
ICPKQICDEKETQKCVGTIYKHSINGTLCY
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