EMLSAP00000011202, EMLSAP00000011202 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000011202
Unique NameEMLSAP00000011202
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length810
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..189
NoneNo IPR availablePANTHERPTHR13428:SF4SUBFAMILY NOT NAMEDcoord: 453..802
NoneNo IPR availablePANTHERPTHR13428INNER NUCLEAR MEMBRANE PROTEIN MAN1 (LEM DOMAIN CONTAINING PROTEIN)coord: 453..802
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 717..781
IPR003887LEM domainSMARTSM00540LEMcoord: 2..41
e-value: 1.6E-4
score: 31.1
IPR003887LEM domainPFAMPF03020LEMcoord: 5..39
e-value: 4.5E-6
score: 25.9
IPR003887LEM domainPROSITEPS50954LEMcoord: 1..41
score: 13.152
IPR011015LEM/LEM-like domainGENE3D1.10.720.40coord: 5..43
e-value: 1.3E-7
score: 30.3
IPR011015LEM/LEM-like domainSUPERFAMILY63451LEM domaincoord: 4..42
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330coord: 694..776
e-value: 3.7E-4
score: 19.8
IPR018996Inner nuclear membrane protein MAN1PFAMPF09402MSCcoord: 369..621
e-value: 2.9E-20
score: 72.1

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000011202 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000011202EMLSAT00000011202-707049Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000011202 ID=EMLSAP00000011202|Name=EMLSAP00000011202|organism=Lepeophtheirus salmonis|type=polypeptide|length=810bp
MVIGDEELRRRLKEQNYPIPPITDTTRHVLLKKLQQLENEESCEGAEESL
GGRGXLLSKPLFDYSSAEDEEGGGGGSLSRNEPQPFKKKSSTLRRRVIHT
NGGSIPPVAGPVSKSYKTLANGYHSKRKSLLSHSETEEDDDDDDDSEEDQ
HSVGLYGKHAQHEEEEEEDEEEEEEEEEEEEEEEEENSPMNPSGNRSSSS
SYLKGTPMMRDRFASSTPLNSVRSTASYLVDTDSSSPRLKPEFSSLSSPT
LRKQIASNKESFGSLGEALSSLPQNSGSNSLLTNMRPMLFSNGGTNSVLT
QAAPPVSHLQKEFKTKRSSFCNSHTISKIIVVLAGIFFSGIAFKYSNLRP
NPNIQNRIVICEKPSFPENCVNVEDAEKFTHMHRDVVDILEKKGXEIMXG
GDEDVSSPPLSSHEDQVSFQGNATFSYSIQELYTDLKSIPENKALDDGCF
SRFIHLLAQNPQWGVLVSSNKDEISLYNPPINWSCWLSLKIGLTYSFLCS
VLSWILKGIIVLSICYGLYRWRLWSQDRKLREHQDVFELVEHVLSILATQ
NTLVLREGRGSTSXPCIAINHIRDQLISPQDRDKKKKLWDKVVNYIRKSE
SRVREDAQKIYGEEVKVWQWIPDIRWGNSSLNQHGPNPYVPGVAAXXXPP
PPQHSPPSMPSSSAHLTSSPQWQGSAFSSLNKNVAAPQVAPTSCLKVRHM
FDRTIMQSSPTQWVWKVKEEILRRCSGSANIIHIAVDKQSPEGCVYIKTS
NTEGAGAVFRCLHGQWYRGNLVTVKYLREERYQERFPESPLAKNQLLSQK
XYNXYYRSIN
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