EMLSAP00000011382, EMLSAP00000011382 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000011382
Unique NameEMLSAP00000011382
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length1138
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 96..134
NoneNo IPR availableGENE3D3.40.50.300coord: 12..59
e-value: 8.2E-11
score: 41.1
coord: 185..235
e-value: 8.2E-11
score: 41.1
coord: 316..361
e-value: 8.2E-11
score: 41.1
NoneNo IPR availablePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 1..809
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 878..1013
IPR006555ATP-dependent helicase, C-terminalSMARTSM00491HELICc2coord: 649..776
e-value: 3.2E-37
score: 139.6
IPR006555ATP-dependent helicase, C-terminalPFAMPF13307Helicase_C_2coord: 631..789
e-value: 9.6E-45
score: 152.4
IPR006554Helicase-like, DEXD box c2 typeSMARTSM00488DEXDc2coord: 8..394
e-value: 9.3E-93
score: 324.1
IPR004821Cytidyltransferase-like domainTIGRFAMTIGR00125TIGR00125coord: 879..949
e-value: 6.0E-17
score: 59.4
IPR004821Cytidyltransferase-like domainPFAMPF01467CTP_transf_2coord: 881..1010
e-value: 8.5E-15
score: 55.0
IPR010614DEAD2PFAMPF06733DEAD_2coord: 190..372
e-value: 8.7E-50
score: 168.4
IPR013020DNA helicase (DNA repair), Rad3 typeTIGRFAMTIGR00604TIGR00604coord: 133..802
e-value: 1.6E-142
score: 474.3
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 877..1003
e-value: 6.7E-36
score: 122.7
IPR027076ATP-dependent RNA helicase CHL1PANTHERPTHR11472:SF5CHL1 HELICASE HOMOLOGcoord: 1..809
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 345..354
IPR014013Helicase, superfamily 1/2, ATP-binding domain, DinG/Rad3-typePROSITEPS51193HELICASE_ATP_BIND_2coord: 7..402
score: 25.721
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 186..221
coord: 11..63
coord: 319..357

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000011382 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000011382EMLSAT00000011382-707229Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000011382 ID=EMLSAP00000011382|Name=EMLSAP00000011382|organism=Lepeophtheirus salmonis|type=polypeptide|length=1138bp
MDPIPTPKSFPFPYDEPYPIQKDFMKSLFRCLDNGKLGIFESPTGTGKSL
SLICGTLLWFKQREEARKKYLKNKIEEKSDVNSDGEEDWFSVALRNRAKN
EEKLEYKLELKFLEEKQQRLEEIRQKSKLKKDVQFHHYYEKKGSSMSDIN
ENEDEDHDLVLNDYSSGEEDGGEENYPPEDQVDYSQRIYYCSRTHSQLSQ
FVKEVKKSPYADSIRLISLGSRKNACINDSVRKLKHNASMNEKCIDLQKG
LQKTQVDKDKRASKKKKTTNGCPFYSQIRIEALKNMALTQISDIEDLVSK
GKKTQTCPYYSSRHASEDAELVVIPYNTLLHKSTREACGIKLKNSVLIID
EAHNLLETIAHIHSCEIKGSHLKDIKFQLQGYLEKFRTRLKPRNILYIKQ
LIFIVTNFIKVMTSSQILTTMAFLQDSQIFNIDLFKILQYILKSKLSYKL
RGFSQKYSNEAQKPSNTQTFLNSMKKNYKEESPAQGVRPETESDHSDGPS
QINILFSFISNLVEDLDDGRVVITHSNDFSGSSIKFILLNPTNHFKDLVK
ECHSIIVAGGTMEPVDEFKKRLFISSGATTERIHHFSCGHIIPESNILPI
VLHRGPSGKLLDFSFSLRDLKETYEEILRILSNLVTIIPGGIVVFFPSYH
YETKVHAFLSKSSTWNNLVAKKRSYIESPRIQMQWKSVVGGKMSEGINFS
DDMGRCVLMIGLPFSNSKSPELKEKMEYLNRTEGSNAGNSYYENSCMKAV
NQSIGRAIRHGNDYATIILADHRYSRGNIHELLPGWIRDKVWNSDKFGPV
VPRIRQFFKILLHQYRLYLLKMSRKREAEGSSEQRLXTHLGPAPFDSDKX
AAIERESQDYSIKITLDMARSGLSPRKVRVYADGIYDLFHQGHARQLMQA
KNVFGPRTEVYLLVGCTSDELTNKRKGKTVMSEEERYEAIRHCRYVDEVV
RDAPWECDDDFLSFHKIDFVAHDEAPYVTESGSDVYAALKEKGMFVATQR
TDGVSTSDVVARIVKDYDKYIRRNLARGYTRQDLNVSFFHGNRLKLGIKV
DEVKEKTKGFIERKKEEYASKIEVTSKELIGTFMALFGARDWNFDQFWAH
SKERLSHALSPPASPSRNEDDDYDEDQPQPKRVKIDLS
back to top
Add to Basket