EMLSAP00000012120, EMLSAP00000012120 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000012120
Unique NameEMLSAP00000012120
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length810
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003306WIF domainSMARTSM00469WIFcoord: 26..170
e-value: 1.1E-15
score: 68.2
IPR003306WIF domainPFAMPF02019WIFcoord: 30..168
e-value: 5.2E-19
score: 67.8
IPR003306WIF domainPROSITEPS50814WIFcoord: 29..168
score: 25.345
IPR000562Fibronectin, type II, collagen-bindingSMARTSM00059FN2coord: 511..559
e-value: 2.6E-4
score: 17.1
coord: 640..689
e-value: 4.4E-7
score: 39.5
coord: 576..624
e-value: 1.1E-6
score: 36.4
IPR000562Fibronectin, type II, collagen-bindingPFAMPF00040fn2coord: 518..546
e-value: 2.5E-9
score: 36.8
coord: 583..624
e-value: 1.9E-9
score: 37.2
coord: 647..683
e-value: 2.4E-10
score: 40.0
IPR000562Fibronectin, type II, collagen-bindingGENE3D2.10.10.10coord: 576..624
e-value: 1.6E-12
score: 46.5
IPR000562Fibronectin, type II, collagen-bindingGENE3D2.10.10.10coord: 630..692
e-value: 2.4E-12
score: 46.0
coord: 505..560
e-value: 1.4E-11
score: 43.5
IPR000562Fibronectin, type II, collagen-bindingPROSITEPS51092FN2_2coord: 578..626
score: 14.804
IPR000562Fibronectin, type II, collagen-bindingPROSITEPS51092FN2_2coord: 642..691
score: 13.142
IPR000562Fibronectin, type II, collagen-bindingPROSITEPS51092FN2_2coord: 513..561
score: 12.777
IPR013806Kringle-like foldSUPERFAMILY57440Kringle-likecoord: 509..547
IPR013806Kringle-like foldSUPERFAMILY57440Kringle-likecoord: 575..625
IPR013806Kringle-like foldSUPERFAMILY57440Kringle-likecoord: 637..683
NoneNo IPR availableTMHMMTMhelixcoord: 202..224
NoneNo IPR availableTMHMMTMhelixcoord: 492..509

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000012120 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000012120EMLSAT00000012120-707967Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000012120 ID=EMLSAP00000012120|Name=EMLSAP00000012120|organism=Lepeophtheirus salmonis|type=polypeptide|length=810bp
MWTSEIHFWMAYALMSFNNLELVGCNFDFYIDSHQTKLLYGLDFREIYFI
RNGVINQNAITFLNEEIPTYVDRLIFHWHLSQSRTSTSYHMQVIHLPGPI
MRTPILNISSNGFLSFEDTVFSIELPCTGRVRDHVDIMIKMTFISKLLDE
YNQSIEPLSLNFKRRKLCAKSSNYMMDGSKANENDDLEYPEQRLSPVAST
CIAFGSVLTTIIFLFVLLGFLYVTRKKRHPNIPLNSLVHLDYIPHQNFPT
NGYKCYSTPDSFSRLSMEKLCSMKETGYQGSPLNSCSKSFSLHFRNNTEN
SRQLLQNXSSPSSTSNHDPIHSNTIYKYLPSKDESSSLSNISPSVPRSLV
IEDGVLRLSSSSGYPPPTANKIQNISSCSSSYSSSISLNPQLHDQQPKSI
VSSPLTASSNTDDFFPNGETLGIKTLSEKDEEQSGISKNEGTGSDSSYIP
HLYSHLMPKNIKKASGRLPNTETQNSLLDHQTTISKMIKKQLIYVLIVIC
LVVAVVSSSCKTKTGKTCKFPFKYNGVTYRDCTTIDNGSTKWCATSVSET
GVLKDYGDCAGDCSVVNKPDSIGGCPTTNGRRCVFPFKYNEVTYNECTKE
GFGDTFWCATTVSSNGDTIAYGICTANCPKPSTLSSEVCGTINGKACVFP
FVYGEVSYKACTSVDNNDVPWCATSTNPSNHQYISYGNCKQSCKVIIETA
SSLASTIDVISISQSSVSNSPIKPAIDITIKPSKIDTTIVQPSRVDTTTV
KPSKIDTTTVKPSRIDTTTMEPQTSAPAQSINLKKPKRVSLKGSNNVGGK
RRGKGRNNGR
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