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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR003306 | WIF domain | SMART | SM00469 | WIF | coord: 26..170 e-value: 1.1E-15 score: 68.2 |
IPR003306 | WIF domain | PFAM | PF02019 | WIF | coord: 30..168 e-value: 5.2E-19 score: 67.8 |
IPR003306 | WIF domain | PROSITE | PS50814 | WIF | coord: 29..168 score: 25.345 |
IPR000562 | Fibronectin, type II, collagen-binding | SMART | SM00059 | FN2 | coord: 511..559 e-value: 2.6E-4 score: 17.1 coord: 640..689 e-value: 4.4E-7 score: 39.5 coord: 576..624 e-value: 1.1E-6 score: 36.4 |
IPR000562 | Fibronectin, type II, collagen-binding | PFAM | PF00040 | fn2 | coord: 518..546 e-value: 2.5E-9 score: 36.8 coord: 583..624 e-value: 1.9E-9 score: 37.2 coord: 647..683 e-value: 2.4E-10 score: 40.0 |
IPR000562 | Fibronectin, type II, collagen-binding | GENE3D | 2.10.10.10 | | coord: 576..624 e-value: 1.6E-12 score: 46.5 |
IPR000562 | Fibronectin, type II, collagen-binding | GENE3D | 2.10.10.10 | | coord: 630..692 e-value: 2.4E-12 score: 46.0 coord: 505..560 e-value: 1.4E-11 score: 43.5 |
IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 578..626 score: 14.804 |
IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 642..691 score: 13.142 |
IPR000562 | Fibronectin, type II, collagen-binding | PROSITE | PS51092 | FN2_2 | coord: 513..561 score: 12.777 |
IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 509..547 |
IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 575..625 |
IPR013806 | Kringle-like fold | SUPERFAMILY | 57440 | Kringle-like | coord: 637..683 |
None | No IPR available | TMHMM | TMhelix | | coord: 202..224 |
None | No IPR available | TMHMM | TMhelix | | coord: 492..509 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000012120 ID=EMLSAP00000012120|Name=EMLSAP00000012120|organism=Lepeophtheirus salmonis|type=polypeptide|length=810bp MWTSEIHFWMAYALMSFNNLELVGCNFDFYIDSHQTKLLYGLDFREIYFI RNGVINQNAITFLNEEIPTYVDRLIFHWHLSQSRTSTSYHMQVIHLPGPI MRTPILNISSNGFLSFEDTVFSIELPCTGRVRDHVDIMIKMTFISKLLDE YNQSIEPLSLNFKRRKLCAKSSNYMMDGSKANENDDLEYPEQRLSPVAST CIAFGSVLTTIIFLFVLLGFLYVTRKKRHPNIPLNSLVHLDYIPHQNFPT NGYKCYSTPDSFSRLSMEKLCSMKETGYQGSPLNSCSKSFSLHFRNNTEN SRQLLQNXSSPSSTSNHDPIHSNTIYKYLPSKDESSSLSNISPSVPRSLV IEDGVLRLSSSSGYPPPTANKIQNISSCSSSYSSSISLNPQLHDQQPKSI VSSPLTASSNTDDFFPNGETLGIKTLSEKDEEQSGISKNEGTGSDSSYIP HLYSHLMPKNIKKASGRLPNTETQNSLLDHQTTISKMIKKQLIYVLIVIC LVVAVVSSSCKTKTGKTCKFPFKYNGVTYRDCTTIDNGSTKWCATSVSET GVLKDYGDCAGDCSVVNKPDSIGGCPTTNGRRCVFPFKYNEVTYNECTKE GFGDTFWCATTVSSNGDTIAYGICTANCPKPSTLSSEVCGTINGKACVFP FVYGEVSYKACTSVDNNDVPWCATSTNPSNHQYISYGNCKQSCKVIIETA SSLASTIDVISISQSSVSNSPIKPAIDITIKPSKIDTTIVQPSRVDTTTV KPSKIDTTTVKPSRIDTTTMEPQTSAPAQSINLKKPKRVSLKGSNNVGGK RRGKGRNNGR back to top
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