EMLSAP00000012262, EMLSAP00000012262 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000012262
Unique NameEMLSAP00000012262
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length539
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001508NMDA receptorPRINTSPR00177NMDARECEPTORcoord: 500..524
score: 24.8
coord: 316..343
score: 35.36
IPR001320Ionotropic glutamate receptorPFAMPF00060Lig_chancoord: 244..425
e-value: 5.3E-11
score: 42.3
NoneNo IPR availableGENE3D1.10.287.70coord: 235..364
e-value: 2.8E-14
score: 52.4
NoneNo IPR availablePANTHERPTHR18966IONOTROPIC GLUTAMATE RECEPTORcoord: 174..522
NoneNo IPR availableTMHMMTMhelixcoord: 247..269
NoneNo IPR availableTMHMMTMhelixcoord: 500..522
NoneNo IPR availableTMHMMTMhelixcoord: 308..330

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000012262 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000012262EMLSAT00000012262-708109Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000012262 ID=EMLSAP00000012262|Name=EMLSAP00000012262|organism=Lepeophtheirus salmonis|type=polypeptide|length=539bp
MKITLKIHASLQMIQSLCSKFSCQVWNIQENVKPSSLYKRMKFRDFWCEI
FLIDDADLIPYIDCYDPKICSIVLMQKDIHGLLDMDAVLKTSQNRLLTPV
ILFSPTSNGDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNIYS
VCCDVLDSGPIRMGVLPPEEEHPMIQIIAQKIGFDFEIVPYVEWGGYSEA
NNNWTGITKNMVYMGPFDVKEFVTIVCPRPRPLPKINNIIIPFSKNVWIG
TFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFG
EGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPID
SLEELKVSNYQFVVGLYEQIYAFADPYLRESMHYFLERDRLIIKDSQIFL
PDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQVPFNSPFVSWYFK
KPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEV
IILFIFLAGISAVSVLLLIFEITLTSTKNFLELSYSVYI
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