EMLSAT00000012262, EMLSAT00000012262-708109 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012262
Unique NameEMLSAT00000012262-708109
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s895supercontigLSalAtl2s895:444..5506 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012262 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012262EMLSAG00000012262-695028Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000055029EMLSAE00000055029-763957Lepeophtheirus salmonisexon
EMLSAE00000055030EMLSAE00000055030-763958Lepeophtheirus salmonisexon
EMLSAE00000055031EMLSAE00000055031-763959Lepeophtheirus salmonisexon
EMLSAE00000055032EMLSAE00000055032-763960Lepeophtheirus salmonisexon
EMLSAE00000055033EMLSAE00000055033-763961Lepeophtheirus salmonisexon
EMLSAE00000055034EMLSAE00000055034-763962Lepeophtheirus salmonisexon
EMLSAE00000055035EMLSAE00000055035-763963Lepeophtheirus salmonisexon
EMLSAE00000055036EMLSAE00000055036-763964Lepeophtheirus salmonisexon
EMLSAE00000055037EMLSAE00000055037-763965Lepeophtheirus salmonisexon
EMLSAE00000055038EMLSAE00000055038-763966Lepeophtheirus salmonisexon
EMLSAE00000055039EMLSAE00000055039-763967Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767915auto767915Lepeophtheirus salmonispolypeptide
EMLSAP00000012262EMLSAP00000012262Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012262

>EMLSAP00000012262 ID=EMLSAP00000012262|Name=EMLSAP00000012262|organism=Lepeophtheirus salmonis|type=polypeptide|length=539bp
MKITLKIHASLQMIQSLCSKFSCQVWNIQENVKPSSLYKRMKFRDFWCEI
FLIDDADLIPYIDCYDPKICSIVLMQKDIHGLLDMDAVLKTSQNRLLTPV
ILFSPTSNGDVQLSIWCPHCGTGLNKIGYWNNYGNYIVYQDPRYSLNIYS
VCCDVLDSGPIRMGVLPPEEEHPMIQIIAQKIGFDFEIVPYVEWGGYSEA
NNNWTGITKNMVYMGPFDVKEFVTIVCPRPRPLPKINNIIIPFSKNVWIG
TFFSYFIVGGILSLVSCIYKSWRIHPEIKPAEKPLKWISRFEVSYGIPFG
EGVPNKWIGPYSAFSIILTFWQLMAMVLILSYTCNLRSYLIVNPYERPID
SLEELKVSNYQFVVGLYEQIYAFADPYLRESMHYFLERDRLIIKDSQIFL
PDVVKPDQCSVQHSTSSYYMNYKSVKKDGIPQFHVAQVPFNSPFVSWYFK
KPNLISTKMRENVARVMDSGMAMRFYKDNVPPLYKVKEESKIEAQSLDEV
IILFIFLAGISAVSVLLLIFEITLTSTKNFLELSYSVYI
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mRNA from alignment at LSalAtl2s895:444..5506-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012262-708109 ID=EMLSAT00000012262-708109|Name=EMLSAT00000012262|organism=Lepeophtheirus salmonis|type=mRNA|length=5063bp|location=Sequence derived from alignment at LSalAtl2s895:444..5506- (Lepeophtheirus salmonis)
ATGAAAATAACTTTAAAAATACATGCAAGGTATGTTTGGTATCGTCAGAA
ATATTTCAATTAAAGAGACTCGACGAGAAAGACAATCAAAAGATCAGAGA
ATTAAAAAGTTAGAATCTTAAGTTAATCTTAAATCTTAAGATATCCTTGT
TTGGCTCCTTTTTTATTTTCAAAAAACGTCTCTTGATCCTCGTACCTCAG
AATTGTTCGGAACCTTGCTAAAATAATTGGAACCATTCTTATGATAAATT
AGCCAAATCCTTTTTGGTATAGCCTACGGATGACATATTCTCGGGAAAGT
GTATTGAATGCTTTGGCAATGTCTATGGCAATTACAGACAGGTTTTTCTC
TGATTTGAGTAAAGTTTGTACTGAAAAGGGTACGTTGTCCATTAGATTAT
CTTTTAAGAATTTGGAGTGAAGTCGTGAATTTTATAGATCTTTGATGTTA
TCCATTTCAAGCTTGACTCCGTACAGTAAATCTTATCTCTGAATAACGTG
TCTAATTTCGTTCTTTTTCCTTGTAACGAAGCTGGGTATTTACCAATGTT
GACTAATTCATCTATATCTCTAGCATGTGCATAGGAGTTTATTGCACCTG
GTCCACGATTTAATTCTTTTGAGCATCATTTCGTATTCAGAAAAAACATC
AACACCTTACTTAATATTTGCACATGTGTCCTCACTGATGTTTATAACTG
CACTGTTTAAGAATTCTTCTTCCAAAAGTCGATGGTTGATATTCCAGAGG
CCCTTGTTCCTCAGTTCCCTGTCGTGTGGGGCAAATTAAATAAATAAAGC
CTTATGATCAGAGTGTTCCAGACTTTGTACGTTTTAAGAGAACTTATCTG
AAAGCCTGTAAAAATTAATAAATCTATCCTCGAAGATGTAGGCCTTGAAT
ATCTGAAATATTAATTACATGTTAAACTTTTAATTTAATGCATTTACTTT
ATTAAAATATCAAAATTATTTTGCACTCTCCTCAAGCATAAAAAAAGATT
GTGTTCCATATTCATTAAAGGGATCTCTTAAAATGAAGAATATTTATATT
CATAAAGCAAAGTATGTCTGTCTGTCTGGATGTTTGCCTATACCTCATTT
TTAAGTGATACTACTTGATTTAAAGAAATAACAGTATAGCAAAAAAATGA
TAAAACAATTTATATATATTAATAGAAAACGGAAGTACAAAAATTATTGT
TTGAAAAAAGTCCTTCAGTATATATGTTTGCAATTTTTAATAATTTTTAG
AATTTTGTAGTATTCTTTTTTTAAATTTTCTATAAAATAATTATATCTAT
TAAATACATGATTAAATTAAAACTTGGGAATATCTATATTGATAAAATAA
ATATGTCTTACTTTTTTCGACGCCTTATAACTCTAAGCAATTCCGGTTAC
TCACGCTAGTAAAATAATAGAGAAAAGGAAACAGTACCATAGAATTTGCA
TGATTGCTTATTCTAAGCGTTACAATATTTTAAATTTTTCTCGAATAAGT
TGATATAATTTTATCGAAATTCAAAACTAACTTATAGCAAAAGAATCAGC
AATTATTGAAATGATGAATGAAATGGTAAGTTAGAGCATAATTGACTTTA
TAAATACAAAAATATTTATTCTCCAATAAATTACTTTAACTCTTTAATAT
CAGTTTTTATCCAATATATCCGAGAAAAATATAAGAAAAATAATTTGTAT
TATATTATTATTCAATTGTAATGTATTTAAATAGTCTCACTATAATATTT
TCGATAAAAAAATAAATGTTGCTACTATCTTTTATCTCATTGCTAATAAA
CATAAATTATTTATCGAAAATGTAACTGAAATTGTCTTTCTTTTACAAGC
ATTCAATTTATTTGTGCTTTCGACAATATATCATTACTTATTTAAATTTC
AATTTTGTTAAATAACATATTATCCTTAAATGTAATCAATTGAATCTATC
TATTAAAAGGATTTCATCAATTGTGGACAGGTCAACTCTTTCACTAAATA
CTTTTATTTAATTTCATGTCCACAATTTCCAACAAATTATTTACGCTTTT
ATTCCAATACGATTATATCGTCAAACTCACATATAAGATTTTTGTTCCTA
AAATTGAGGGTTCCTTGTTAGCATTTGTAAAAATATATGGATATCTACAT
ATGTAAAATTATACATATTCCATACCTATGTATCAATTATAGTAATTTAT
TTGCTTATTCTTTCATTAATCTAGGTATATGTAAACACATAAATTTGAAT
ACCGATGAACAAATTTGTAGTCATTTGAATTGGATTTCCTCACGAGCATG
GACACACTCAATTATAACTTTATTTCTGAATATCTAGCGGATGATTTAGT
TTATCGGCTCAAAGGGRTATCAGCTCCTCAATTTGATCAATCTTGTAGTT
TGATCATTTTAGCTTCCTTGAGGTGTAGTTTCATTTATTGGTTTCAAGAG
GTTTCATTCATTTTATGCACTAATTTTTTGACAGTTTGCAAATGATTCAA
AGTTTATGTAGTAAATTCTCATGTCAAGTTTGGAATATACAGGAAAATGT
GAAACCCTCTTCACTCTATAAGCGCATGAAATTTAGGGACTTTTGGTGCG
AAATTTTTCTTATTGATGATGCCGATCTTATCCCTTACATTGATTGCTAT
GATCCAAAAATATGTAGTATTGTCCTAATGCAGGTACTTTATCATAAAAA
TGAATATTTGCATTATGATTTGTTCTGATTTGACTATTATAATGTGAAAT
AGAAGGATATACATGGATTGTTAGATATGGACGCTGTTTTAAAGACATCA
CAGAATAGATTATTAACCCCTGTCATTCTTTTCTCTCCTACTTCTAATGG
TGACGTTCAGTTGTCGATTTGGTGTCCACATTGTGGTACAGGTTTGAATA
AAATTGGATATTGGAATAATTATGGGAATTACATAGTATACCAAGATCCC
CGTTACTCACTCAACATATATAGTGTGTGCTGTGATGTTCTCGATTCTGG
GCCTATTCGAATGGGTGTTTTACCTCCTGAAGAAGAACATCCCATGGTAC
ATTGGGGGATGGAATGGTAGTTATTACTTCTTACTATTATATTAAATTAT
ATATATTTAAAAGATTCAAATTATAGGTACAAAGGGAAATATAAAATTGT
TCAAACAGGACTTGTTTATGCTCCTTTTTTCTACATAGCTCAAAAAATTG
GATTTGATTTTGAGATAGTTCCCTATGTTGAATGGGGAGGCTACAGCGAA
GCTAATAATAATTGGACGGGAATTACAAAAAACATGGTGTATAATGATAC
TATAKACTTCATTTCCTATGCCTCACTTCGCTCTGTCATTAATGAAACTA
GTGGAAATGTTGCTGATGAACTTGAGGTTTCGATCACTTAATAAAAAAAT
GATATAAAATGTTTACCATTTCCAGGTGTACATGGGACCTTTTGATGTTA
AAGAATTTGTTACTATTGTTTGCCCTCGTCCGAGGCCCTTACCAAAGATA
AATAATATTATCATCCCTTTTTCAAAAAATGTCTGGATAGGAACCTTTTT
TAGTTATTTCATTGTTGGAGGAATACTTAGCCTTGTGTCTTGTATTTATA
AAAGTTGGAGAATACACCCTGAGGTATGCATAAAAAATATATACATTGTA
ACTAAAGANTGTACATTTTTACTTAAATATTAAATTATTTCGTGATTAAG
ATCAAACCAGCTGAAAAACCCCTGAAATGGATAAGTAGATTTGAAGTATC
CTACGGGATACCATTTGGAGAAGGAGTTCCTAATAAATGGATAGGACCTT
ACTCTGCATTTTCTATAATTTTGACTTTTTGGCAGCTGATGGCCATGGTT
CTAATTCTTTCATACACTTGTAACCTAAGGTAAATAAAAAATTAACAACA
TTTCATAATTGAGGAATAAATTTCATTTTATGCCTGCTAAGGTCATATCT
CATTGTAAACCCGTATGAACGTCCCATAGATAGTCTTGAGGAGTTAAAAG
TCTCAAATTATCAATTTGTCGTTGGGCTATACGAACAAATTTATGCCTTT
GCTGACCCCTATTTGAGAGAATCTATGCACTACTTTCTAGAGAGGGATCG
GTTAATCATCAAAGATAGTCAAATTTTCCTTCCAGATGTAGTGAAACCCG
ATCAATGTTCTGTTCAGCATTCAACATCAAGTTACTACATGAACTACAAA
AGTGTAAAAAAGGACGGCATCCCTCAATTCCATGTGGCCCAAGTACCATT
TAATTCCCCGTTTGTGTCATGGTATTTTAAAAAACCCAATTTGATATCCA
CAAAAATGAGAGAGAATGTAGCAAGAGTTATGGACTCTGGGATGGCAATG
CGTTTTTATAAGGATAATGTTCCTCCTCTTTATAAGGTTAATAATTTATA
AATTCAAAACAATGTTTATCCGAAAAATATCTATTATACATATACTTTTA
TAATAGGTGAAGGAAGAGAGTAAAATTGAAGCTCAGAGTTTGGATGAAGT
CATTATTTTATTTATTTTTTTAGCAGGAATTTCTGCTGTGTCTGTTCTCT
TATTAATTTTTGAAATAACTTTGGTATATATCCAATGATAATAAGAAAGT
AATGATAAAGGTGTCAAGGAAAATCAACAAACAATAATATTTTCTTCTTT
GTTTGCATCAAAATACAATTAAAAAAAAAAAATACATTGAGTCTCTTATT
TTTCATTCTAAACTTACGAATTTGTATATATTTTTTATAAATTTTCTAAT
AATGTTTACTATATTTGTTACTATGACCAGGGTAGTGGTTGTCTTCCCAA
AGAAGTAAGTCACACGTAGGCTGCAAGAAGTTCTCACCTAAATATAAATC
AACTTCTACAATAGGTTATACAAAGCTTTTTGATTTGAAAACAAAAATAT
ATTTATTATATTTAATAACAGACCTCAACGAAAAACTTTTTAGGTAATTT
GGCTCTCTCAAACCAAAAGTAATTCTTTGTATGGGGAAAAACTATTTCAT
AAAATCGTAACAAATGAATATTTCATTATTTTTAAAGAATTGTCCTACTC
AGTGTACATATAA
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