EMLSAP00000012571, EMLSAP00000012571 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000012571
Unique NameEMLSAP00000012571
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length227
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006649Ribonucleoprotein LSM domain, eukaryotic/archaea-typeSMARTSM00651Smcoord: 5..72
e-value: 1.4E-18
score: 77.7
NoneNo IPR availableGENE3D2.30.30.100coord: 1..83
e-value: 6.3E-28
score: 95.6
IPR004123mRNA splicing factor, thioredoxin-like U5 snRNPPFAMPF02966DIM1coord: 94..221
e-value: 1.1E-62
score: 209.3
IPR004123mRNA splicing factor, thioredoxin-like U5 snRNPPANTHERPTHR12052THIOREDOXIN-LIKE PROTEN 4A, 4Bcoord: 94..227
IPR012336Thioredoxin-like foldGENE3D3.40.30.10coord: 94..227
e-value: 2.0E-80
score: 267.3
IPR012336Thioredoxin-like foldSUPERFAMILY52833Thioredoxin-likecoord: 95..222
IPR001163Ribonucleoprotein LSM domainPFAMPF01423LSMcoord: 6..72
e-value: 9.1E-15
score: 53.8
IPR010920Like-Sm (LSM) domainSUPERFAMILY50182Sm-like ribonucleoproteinscoord: 3..94

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000012571 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000012571EMLSAT00000012571-708418Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000012571 ID=EMLSAP00000012571|Name=EMLSAP00000012571|organism=Lepeophtheirus salmonis|type=polypeptide|length=227bp
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDVSVTDPDK
YPHMLSVKNCFIRGSVVRYVQLPHEEVDAQLLQDAARKEASNNQNGWZVD
QXILSEEDRVICIRFGHDWDPTCMKMDETLFGIAERVKNFCVIYLVDITQ
VPDFNKMYELYDPCTVMYFFRNKHIMIDLGTGNNNKINWPMEDKQEMIDI
IETVYRGARKGRGLVVSPKDYSTKYRY
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