EMLSAP00000012636, EMLSAP00000012636 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000012636
Unique NameEMLSAP00000012636
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length863
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000286Histone deacetylase superfamilyPRINTSPR01270HDASUPERcoord: 689..699
score: 48.43
coord: 564..587
score: 48.0
coord: 598..613
score: 50.12
IPR000286Histone deacetylase superfamilyPANTHERPTHR10625HISTONE DEACETYLASEcoord: 35..797
IPR023801Histone deacetylase domainGENE3D3.40.800.20coord: 426..797
e-value: 5.6E-117
score: 390.2
IPR023801Histone deacetylase domainPFAMPF00850Hist_deacetylcoord: 441..757
e-value: 9.9E-82
score: 274.5
NoneNo IPR availablePANTHERPTHR10625:SF21HISTONE DEACETYLASE 4 (HD4)coord: 35..797
NoneNo IPR availableSUPERFAMILY52768Arginase/deacetylasecoord: 424..796

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000012636 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000012636EMLSAT00000012636-708483Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000012636 ID=EMLSAP00000012636|Name=EMLSAP00000012636|organism=Lepeophtheirus salmonis|type=polypeptide|length=863bp
MMKSNLPFDLIPEEDVPPKDSPPSSKSSPENRPSLALIKTQHLLHQQILD
KRFGRNFELLQQSQEKQLSQYIQQVELPRHRSNSTTSSPTNNATINASLG
AGSPRDIDQKERHRLRFIKQKSLNDQSAVASPEVKKHLQEFVLQKKRKEA
SMVNLKSEILCSNASQSSSSTHHPILRKTASESNLLKMKSKRADIRSSVT
PYARFGSHGPTQPVIPEGSVVHDSAPSSPQTTEDSTIGGSPSSCSYSMSP
HVPSNVVTXSTTPPTTSHHSHHSRYENSLRSTLVERNNLIIVGNEDSSIN
SKSLPNIPSAIGRAALINKAVGRRSPPTNMSNRLPHHPSMMVRRTKSSAI
LPLRKHLIEKQRXADEEQYFQQKLNERFVRPTIVEEDSSNIFMDIDDGRR
IHSLATSVRSSGISQLLLGDLNPPSTGLGFDSIMLNHTCKCGNNAAHIEN
PSRASHIWNRLIEQGLVAHCKRISRKATLEEIQSSHSENHTLLYGSDMIS
RKSTTSYGPKFSMLECGGIGVDSDTYWNENYTSEVLRTAVGTLIEISEMV
VNDELKNGFAIIRPPGHHAEYEEAMGFCYFNSVAITANRLLLSPNVTKVM
ILDWAIHHGNGTQKAFYDNPNVLYISLHRHDNGNFYPGTGSLTECGHGPG
LGFNVNIAWTGDLIPPMGDSEYLAAFRNIVMPIAREFNPDVVLVSAGFDA
AIGXNHPIGGYHVSTACFAYMTLQLQQIAGGKVVLALEGGYDLEVLSTAS
EQCVRALLKFPIEKISEAELARRPTAIAVETLQKTLAIQALYWNSLKGGC
ETAFLSHLEAWEKEREEADALSAMATLSMQQHRNSTSILAEHNHLHQSSS
HQPSSTPITISYY
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