ccr4-not transcription complex subunit 2, maker-scaffold1034_size68570-snap-gene-0.16 (gene) Tigriopus kingsejongensis

Overview
Nameccr4-not transcription complex subunit 2
Unique Namemaker-scaffold1034_size68570-snap-gene-0.16
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of ccr4-not transcription complex subunit 2 vs. L. salmonis genes
Match: EMLSAG00000006470 (supercontig:LSalAtl2s:LSalAtl2s353:368293:371632:1 gene:EMLSAG00000006470 transcript:EMLSAT00000006470 description:"maker-LSalAtl2s353-augustus-gene-2.44")

HSP 1 Score: 109.383 bits (272), Expect = 1.002e-27
Identity = 70/190 (36.84%), Postives = 104/190 (54.74%), Query Frame = 0
Query:  102 DQFGLRGLWRNIQDTHRTRIRPRMAHEPFETTVMSREDLGFSDEVI----RFHGPRLLPHFESPFSSKLNTLYLDYD-VPDEYRTAWKLSGCLKGKWSHYLPTELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESMTEQFGEYQYFDVQSWERKSGSFKFKLEDLATKVQLP 286
            D +GLRGL   I+++ ++ + P        +++++  DLG+S+  +    R   P     F++PFS+ +  +  DY  VP EY  +  L   L    SHY PT+LLFFLFYTAVG++LQL A   LF+RGWRF K    W+ R P    E  S   + G YQYFDV S  +K+       ++ + ++ LP
Sbjct:  102 DDYGLRGLEMLIEESRKSLLSPW-------SSIITPADLGYSNYSLSRSRRLESPY---RFKTPFSNNVLGVLNDYYYVPKEYLHSSILYDQLPLPGSHYWPTDLLFFLFYTAVGEVLQLIAGYNLFDRGWRFNKLTRTWIXRIPQVPLEERSYEFERGTYQYFDVSSGSKKTAKLTLYYKEFSDRIGLP 281          
BLAST of ccr4-not transcription complex subunit 2 vs. SwissProt
Match: gi|46396017|sp|Q9NZN8.1|CNOT2_HUMAN (RecName: Full=CCR4-NOT transcription complex subunit 2; AltName: Full=CCR4-associated factor 2)

HSP 1 Score: 97.8265 bits (242), Expect = 3.098e-21
Identity = 70/237 (29.54%), Postives = 107/237 (45.15%), Query Frame = 0
Query:   54 NNNNAFVSKYPPPPYPGVDVTTLPPPLPPQSGYG--PIGSPCEKPTVLRSDQFGLRGLWRNIQDTHRTRIRPRMAHEPFETTVMSREDLGFSDEVIRFHGPR-LLPHFESPFSSK-LNTLYLDYDVPDEYRTAWKLSGCLKGKWSHYLPTELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESMTEQFGEYQYFDVQSWERKSGSFKFKLEDLATKVQLP 286
            N +    S    P +PG   +T       + G    P G     P  + +DQFG+ GL   I+        P M H    + + +   LG     +  + P  L P F SP++S       +D+ VP EY T   +   L          +LLF+L+Y   GD+LQL AA +LF R WR++KE  VW++R P   P  ++ T + G Y +FD  +W + +  F  + + L  +  LP
Sbjct:  303 NTSGKTTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIR---AAETDPGMVHLALGSDLTT---LG-----LNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLP 528          
BLAST of ccr4-not transcription complex subunit 2 vs. SwissProt
Match: gi|46395846|sp|Q8C5L3.2|CNOT2_MOUSE (RecName: Full=CCR4-NOT transcription complex subunit 2; AltName: Full=CCR4-associated factor 2)

HSP 1 Score: 97.0561 bits (240), Expect = 4.557e-21
Identity = 68/225 (30.22%), Postives = 104/225 (46.22%), Query Frame = 0
Query:   66 PPYPGVDVTTLPPPLPPQSGYG--PIGSPCEKPTVLRSDQFGLRGLWRNIQDTHRTRIRPRMAHEPFETTVMSREDLGFSDEVIRFHGPR-LLPHFESPFSSK-LNTLYLDYDVPDEYRTAWKLSGCLKGKWSHYLPTELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESMTEQFGEYQYFDVQSWERKSGSFKFKLEDLATKVQLP 286
            P +PG   +T       + G    P G     P  + +DQFG+ GL   I+        P M H    + + +   LG     +  + P  L P F SP++S       +D+ VP EY T   +   L          +LLF+L+Y   GD+LQL AA +LF R WR++KE  VW++R P   P  ++ T + G Y +FD  +W + +  F  + + L  +  LP
Sbjct:  315 PKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIR---AAETDPGMVHLALGSDLTT---LG-----LNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLP 528          
BLAST of ccr4-not transcription complex subunit 2 vs. SwissProt
Match: gi|47117030|sp|Q94547.2|RGA_DROME (RecName: Full=Regulator of gene activity; Short=Protein regena; AltName: Full=CCR4-NOT transcription complex subunit 2 homolog; Short=CNOT2; Short=Not2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.477e-19
Identity = 59/193 (30.57%), Postives = 91/193 (47.15%), Query Frame = 0
Query:   88 PIGSPCEKPTVLRSDQFGLRGLWRNIQDTHRTRIRPRMAHEPFETTVMSREDLGFSDEVIRFHGPRLLPHFESPFSSK-LNTLYLDYDVPDEYRTAWKLSGCLKGKWSHYLPTELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESMTEQFGEYQYFDVQSWERKSGSFKFKLEDL 279
            P G     P  + ++QFG+ GL         T IR         T  +  +  G    +       L   F  PF ++      ++++VP EY   + +   L       L  +LLFFLFYT +GD++QL AAA+L  R WR++ E  +W++R P      ++ T++ G + YFD QSW+R S  F+   E L
Sbjct:  388 PDGKVTNIPATMVNNQFGMVGLL--------TFIRAAETDPNLVTLSLGTDLTGLGLNLNSQE--SLHTTFAGPFVAQPCRAQDVEFNVPPEYLINFAIRDKLTAPVLKKLQEDLLFFLFYTNIGDMMQLMAAAELHSREWRYHVEEKIWITRIPGIDQYEKNGTKERGTFYYFDAQSWKRLSKVFQIDPEKL 570          
BLAST of ccr4-not transcription complex subunit 2 vs. SwissProt
Match: gi|384872610|sp|P87240.2|NOT2_SCHPO (RecName: Full=General negative regulator of transcription subunit 2)

HSP 1 Score: 59.3066 bits (142), Expect = 8.175e-9
Identity = 31/85 (36.47%), Postives = 44/85 (51.76%), Query Frame = 0
Query:  200 ELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESMTEQFGEYQYFDVQSWERKSGSFKFKLEDLATKVQ 284
            E LF++FYT   D++Q  AA +L  R WRF+KE  VWL+  P  +P   +   + G Y +FD   W+R    F      L  + Q
Sbjct:  217 ETLFYIFYTMPRDVMQEAAAQELTNRNWRFHKELRVWLTPVPGMKPLQRTPQFERGYYMFFDPIHWKRIKKDFLLMYAALEDRAQ 301          
BLAST of ccr4-not transcription complex subunit 2 vs. SwissProt
Match: gi|75268416|sp|Q52JK6.1|VIP2_NICBE (RecName: Full=Probable NOT transcription complex subunit VIP2; AltName: Full=Protein VIRE2 INTERACTING PROTEIN2; Short=NbVIP2)

HSP 1 Score: 55.4546 bits (132), Expect = 3.104e-7
Identity = 29/89 (32.58%), Postives = 46/89 (51.69%), Query Frame = 0
Query:  200 ELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESMTEQFGEYQYFDVQSWER-KSGSFKFKLEDLATKVQLPR 287
            + LF++FY+   D  QL AA +L+ RGW +++E  +W  R  N  P  ++   + G Y  FD  +WE     +F    E L  +  LP+
Sbjct:  514 DTLFYIFYSMPKDEAQLYAANELYNRGWFYHREHRLWFMRVANMEPLVKTNAYERGSYICFDPNTWETIHKDNFVLHCEMLEKRPVLPQ 602          
BLAST of ccr4-not transcription complex subunit 2 vs. nr
Match: gi|198435936|ref|XP_002131579.1| (PREDICTED: CCR4-NOT transcription complex subunit 2 [Ciona intestinalis])

HSP 1 Score: 107.457 bits (267), Expect = 4.595e-22
Identity = 72/220 (32.73%), Postives = 108/220 (49.09%), Query Frame = 0
Query:   71 VDVTTLPPPLPPQSGYGPIGSPCEK--PTVLRSDQFGLRGLWRNIQDTHRTRIRPRMAHEPFETTVMSREDLGFSDEVIRFHGPRLLPH-FESPFSSKLNTLY-LDYDVPDEYRTAWKLSGCLKGKWSHYLPTELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESMTEQFGEYQYFDVQSWERKSGSFKFKLEDLATKVQLP 286
            VD +T  PP   Q G         K  P  +  DQ+G+ GL+  I+        P + H      + +   LG     +  + P  L H F+SPFS +   L  +D+ VP EY T   +   L     +    +LLFF+FY+  GD+LQL AAA+L+ R WR++KE  +W++R P   P  ++ T + G Y YFD Q+W + +  F  + E L  +  LP
Sbjct:  322 VDKSTHKPPSNQQKGIQVQADNSIKHIPNSMLVDQYGIVGLFAFIK---AAETDPTLVHLALGNDLTT---LG-----LNLNSPDNLYHKFQSPFSRQPCRLQDIDFFVPSEYLTNAHIRDKLAPIKLNRYGEDLLFFVFYSNPGDVLQLAAAAELYNRDWRYHKEERIWITRAPGIDPRMKTSTYEQGTYYYFDCQNWRKVAKEFHLEYEKLEERPHLP 530          
BLAST of ccr4-not transcription complex subunit 2 vs. nr
Match: gi|1043428176|gb|OCA40804.1| (hypothetical protein XENTR_v900080271mg, partial [Xenopus tropicalis])

HSP 1 Score: 98.5969 bits (244), Expect = 1.343e-19
Identity = 70/231 (30.30%), Postives = 105/231 (45.45%), Query Frame = 0
Query:   60 VSKYPPPPYPGVDVTTLPPPLPPQSGYG--PIGSPCEKPTVLRSDQFGLRGLWRNIQDTHRTRIRPRMAHEPFETTVMSREDLGFSDEVIRFHGPR-LLPHFESPFSSK-LNTLYLDYDVPDEYRTAWKLSGCLKGKWSHYLPTELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESMTEQFGEYQYFDVQSWERKSGSFKFKLEDLATKVQLP 286
             S    P +PG   +T       + G    P G     P  + +DQFG+ GL   I+        P M H      + +   LG     +  + P  L P F SP++S       +D+ VP EY T   +   L          +LLF+L+Y   GD+LQL AA +LF R WR++KE  VW++R P   P  ++ T + G Y +FD  +W + +  F  + + L  + QLP
Sbjct:  119 ASSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGLLTFIR---AAETDPGMVHLALGNDLTT---LG-----LNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPQLP 338          
BLAST of ccr4-not transcription complex subunit 2 vs. nr
Match: gi|938061631|gb|KPP63774.1| (hypothetical protein Z043_117937, partial [Scleropages formosus])

HSP 1 Score: 97.4413 bits (241), Expect = 1.883e-19
Identity = 70/226 (30.97%), Postives = 109/226 (48.23%), Query Frame = 0
Query:   66 PPYPGVDVTTLPPPLPPQSGYG--PIGSPCEKPTVLRSDQFGLRGLWRNIQDTHRTRIRPRMAHEPFETTVMSREDLGFSDEVIRFHGPR-LLPHFESPFSSK-LNTLYLDYDVPDEYRTAWKLSGCLKG-KWSHYLPTELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESMTEQFGEYQYFDVQSWERKSGSFKFKLEDLATKVQLP 286
            P +PG   +T+      + G    P G     P+ + +DQFG+ GL   I+        P M H    + + +   LG     +  + P  L P F SP++S       +D+ VP EY T   +   L   K S Y   +LLF+L+Y   GD+LQL AA +LF R WR++KE  VW++R P   P  ++ T + G Y +FD  +W + +  F  + + L  +  +P
Sbjct:   98 PKFPGDKSSTVQNNNQQKKGIQVLPDGRVTNIPSGMVTDQFGMIGLLTFIR---AAETDPGMVHLALGSDLTT---LG-----LNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLSRY-GEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHVP 311          
BLAST of ccr4-not transcription complex subunit 2 vs. nr
Match: gi|1176116343|ref|XP_020629311.1| (CCR4-NOT transcription complex subunit 2-like isoform X2 [Orbicella faveolata])

HSP 1 Score: 99.7525 bits (247), Expect = 2.685e-19
Identity = 69/201 (34.33%), Postives = 100/201 (49.75%), Query Frame = 0
Query:   88 PIGSPCEKPTVLRSDQFGLRGLWRNIQDTHRTRIRPRMAHEPFETTVMSREDLGFSDEVIRFHGPRLLPH-FESPFS-SKLNTLYLDYDVPDEYRTAWKLSGCLK-GKWSHYLPTELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESMTEQFGEYQYFDVQSWERKSGSFKFKLEDLATKVQL 285
            P G     P  + +DQFG+ GL   I+             EP   T+    DL  +   +  + P  L H F SPF+ S      +DY VP EYR    +   L   K S Y   +LLF+L+YT  GDILQL AAA+L+ R WR++K+  +WL+R P   P+ ++ + + G Y +FD  SW + +  F  + + L  K  L
Sbjct:  483 PSGMISNIPKGMVTDQFGMIGLLTFIRAAET---------EPNLVTLALGSDL--TTLGLNLNSPESLYHTFGSPFADSPCRPHEIDYHVPSEYRINSFIRDKLAPIKLSRY-GEDLLFYLYYTNGGDILQLAAAAELYARDWRYHKDERLWLTRAPGVEPQLKTSSYERGTYYFFDCSSWRKVAKEFLLEYDKLEDKPTL 671          
BLAST of ccr4-not transcription complex subunit 2 vs. nr
Match: gi|1176116341|ref|XP_020629310.1| (CCR4-NOT transcription complex subunit 2-like isoform X1 [Orbicella faveolata])

HSP 1 Score: 99.7525 bits (247), Expect = 2.688e-19
Identity = 69/201 (34.33%), Postives = 100/201 (49.75%), Query Frame = 0
Query:   88 PIGSPCEKPTVLRSDQFGLRGLWRNIQDTHRTRIRPRMAHEPFETTVMSREDLGFSDEVIRFHGPRLLPH-FESPFS-SKLNTLYLDYDVPDEYRTAWKLSGCLK-GKWSHYLPTELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESMTEQFGEYQYFDVQSWERKSGSFKFKLEDLATKVQL 285
            P G     P  + +DQFG+ GL   I+             EP   T+    DL  +   +  + P  L H F SPF+ S      +DY VP EYR    +   L   K S Y   +LLF+L+YT  GDILQL AAA+L+ R WR++K+  +WL+R P   P+ ++ + + G Y +FD  SW + +  F  + + L  K  L
Sbjct:  484 PSGMISNIPKGMVTDQFGMIGLLTFIRAAET---------EPNLVTLALGSDL--TTLGLNLNSPESLYHTFGSPFADSPCRPHEIDYHVPSEYRINSFIRDKLAPIKLSRY-GEDLLFYLYYTNGGDILQLAAAAELYARDWRYHKDERLWLTRAPGVEPQLKTSSYERGTYYFFDCSSWRKVAKEFLLEYDKLEDKPTL 672          
BLAST of ccr4-not transcription complex subunit 2 vs. nr
Match: gi|170042857|ref|XP_001849127.1| (conserved hypothetical protein [Culex quinquefasciatus] >gi|167866284|gb|EDS29667.1| conserved hypothetical protein [Culex quinquefasciatus])

HSP 1 Score: 99.3673 bits (246), Expect = 2.908e-19
Identity = 62/193 (32.12%), Postives = 89/193 (46.11%), Query Frame = 0
Query:   88 PIGSPCEKPTVLRSDQFGLRGLWRNIQDTHRTRIRPRMAHEPFETTVMSREDLGFSDEVIRFHGPRLLPHFESPFS-SKLNTLYLDYDVPDEYRTAWKLSGCLKGKWSHYLPTELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESMTEQFGEYQYFDVQSWERKSGSFKFKLEDL 279
            P G     P  + ++QFG+ GL         T IR   +     T  M ++ +     +       L P F  PF+ S      +DY+VP EY     +   L          +LLF+LFYT VGD++QL AAA+L  R WR++ E  VW++R P   P  ++ T + G Y YFD Q+W R    F+     L
Sbjct:  363 PNGMVTNIPASMVNNQFGMVGLL--------TFIRAAESDPNLVTLAMGQDLMALGLNLTSVE--NLYPSFGGPFADSPARPQDIDYNVPPEYLINMSIRDKLSKLTLQKYKDDLLFYLFYTNVGDVMQLAAAAELHSRDWRYHTEEKVWITRVPGMTPYEKNGTTERGTYYYFDAQNWRRVPKEFQVDTVKL 545          
BLAST of ccr4-not transcription complex subunit 2 vs. nr
Match: gi|907619317|ref|XP_013119562.1| (PREDICTED: regulator of gene activity isoform X2 [Stomoxys calcitrans])

HSP 1 Score: 99.3673 bits (246), Expect = 2.994e-19
Identity = 66/194 (34.02%), Postives = 97/194 (50.00%), Query Frame = 0
Query:   88 PIGSPCEKPTVLRSDQFGLRGLWRNIQDTHRTRIRPRMAHEPFETTVMSREDLGFSDEVIRFHGPRLLPHFESPFSSK-LNTLYLDYDVPDEYRTAWKLSGCLKGKWSHYLPTELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYE-SMTEQFGEYQYFDVQSWERKSGSFKFKLEDL 279
            P G     P  + ++QFG+ GL         T +R   + +P   T+ S  DL      +      L P F  PF+        ++Y+VP EY   + +   L       L  +LLFFLFYT +GDI+QL AAA+L  R WR++ E  +W++R P    +YE + T++ G + YFD QSW+R S  F+   E L
Sbjct:  389 PDGKVTNIPASMVNNQFGMVGLL--------TFMRAAES-DPNLVTLASGIDLTGLGLNLNSQ-ESLHPTFAGPFADHPCRAQDVEYNVPPEYLINFAIRDKLSSPHLKKLQEDLLFFLFYTNIGDIMQLMAAAELHSREWRYHIEEKIWITRIPGLNHQYEKNGTKERGTFYYFDAQSWKRLSKVFQIDPEKL 572          
BLAST of ccr4-not transcription complex subunit 2 vs. nr
Match: gi|1160103730|ref|XP_020392320.1| (CCR4-NOT transcription complex subunit 2 isoform X2 [Rhincodon typus])

HSP 1 Score: 98.9821 bits (245), Expect = 2.996e-19
Identity = 70/231 (30.30%), Postives = 107/231 (46.32%), Query Frame = 0
Query:   60 VSKYPPPPYPGVDVTTLPPPLPPQSGYGPI--GSPCEKPTVLRSDQFGLRGLWRNIQDTHRTRIRPRMAHEPFETTVMSREDLGFSDEVIRFHGPR-LLPHFESPFSSK-LNTLYLDYDVPDEYRTAWKLSGCLKGKWSHYLPTELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESMTEQFGEYQYFDVQSWERKSGSFKFKLEDLATKVQLP 286
            VS    P +PG   +T       + G   +  G     PT + +DQFG+ GL   I+        P M H    + + +   LG     +  + P  L P F SP++S       +D+ VP EY T   +   L          +LLF+L+Y   GD+LQL AA +LF R WR++KE  VW++R P   P  ++ T + G Y +FD  +W + +  F  + + L  +  LP
Sbjct:  290 VSSTDGPKFPGDKSSTTQNNNLQKKGIQVLSDGRVTNIPTGMVTDQFGMIGLLTFIR---AAETDPGMVHLALGSDLTT---LG-----LNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLARYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTVKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLP 509          
BLAST of ccr4-not transcription complex subunit 2 vs. nr
Match: gi|1050386727|gb|OCT88920.1| (hypothetical protein XELAEV_18017550mg [Xenopus laevis])

HSP 1 Score: 98.9821 bits (245), Expect = 3.142e-19
Identity = 64/201 (31.84%), Postives = 96/201 (47.76%), Query Frame = 0
Query:   88 PIGSPCEKPTVLRSDQFGLRGLWRNIQDTHRTRIRPRMAHEPFETTVMSREDLGFSDEVIRFHGPR-LLPHFESPFSSK-LNTLYLDYDVPDEYRTAWKLSGCLKGKWSHYLPTELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESMTEQFGEYQYFDVQSWERKSGSFKFKLEDLATKVQLP 286
            P G     P  + +DQFG+ GL   I+        P M H      + +   LG     +  + P  L P F SP++S       +D+ VP EY T   +   L          +LLF+L+Y   GD+LQL AA +LF R WR++KE  VW++R P   P  ++ T + G Y +FD  +W + +  F  + + L  + QLP
Sbjct:  320 PDGRVTNIPQGMVTDQFGMIGLLTFIR---AAETDPGMVHLALGNDLTT---LG-----LNLNSPENLYPKFASPWASSPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPQLP 509          
BLAST of ccr4-not transcription complex subunit 2 vs. nr
Match: gi|1263132061|gb|PFX28270.1| (CCR4-NOT transcription complex subunit 2 [Stylophora pistillata])

HSP 1 Score: 99.3673 bits (246), Expect = 3.212e-19
Identity = 68/201 (33.83%), Postives = 100/201 (49.75%), Query Frame = 0
Query:   88 PIGSPCEKPTVLRSDQFGLRGLWRNIQDTHRTRIRPRMAHEPFETTVMSREDLGFSDEVIRFHGPRLLPH-FESPFS-SKLNTLYLDYDVPDEYRTAWKLSGCLK-GKWSHYLPTELLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESMTEQFGEYQYFDVQSWERKSGSFKFKLEDLATKVQL 285
            P G     P  + +DQFG+ GL   I+             EP   T+    DL  +   +  + P  L H F SPF+ S      +DY VP EYR    +   L   K S Y   +LLF+L+YT  GDILQL AAA+L+ R WR++K+  +WL+R P   P+ ++ + + G Y +FD  +W + +  F  + + L  K  L
Sbjct:  449 PSGMISNIPKGMVTDQFGMIGLLTFIRAAET---------EPNLVTLALGSDL--TTLGLNLNSPESLYHTFGSPFADSPCRPHEIDYHVPSEYRINSFIRDKLAPIKLSRYT-EDLLFYLYYTNGGDILQLAAAAELYARDWRYHKDERLWLTRAPGVDPQLKTSSYERGTYYFFDCSTWRKVAKEFHLEYDKLDDKPTL 637          
The following BLAST results are available for this feature:
BLAST of ccr4-not transcription complex subunit 2 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000064701.002e-2736.84supercontig:LSalAtl2s:LSalAtl2s353:368293:371632:1... [more]
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BLAST of ccr4-not transcription complex subunit 2 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
gi|46396017|sp|Q9NZN8.1|CNOT2_HUMAN3.098e-2129.54RecName: Full=CCR4-NOT transcription complex subun... [more]
gi|46395846|sp|Q8C5L3.2|CNOT2_MOUSE4.557e-2130.22RecName: Full=CCR4-NOT transcription complex subun... [more]
gi|47117030|sp|Q94547.2|RGA_DROME1.477e-1930.57RecName: Full=Regulator of gene activity; Short=Pr... [more]
gi|384872610|sp|P87240.2|NOT2_SCHPO8.175e-936.47RecName: Full=General negative regulator of transc... [more]
gi|75268416|sp|Q52JK6.1|VIP2_NICBE3.104e-732.58RecName: Full=Probable NOT transcription complex s... [more]
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BLAST of ccr4-not transcription complex subunit 2 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|198435936|ref|XP_002131579.1|4.595e-2232.73PREDICTED: CCR4-NOT transcription complex subunit ... [more]
gi|1043428176|gb|OCA40804.1|1.343e-1930.30hypothetical protein XENTR_v900080271mg, partial [... [more]
gi|938061631|gb|KPP63774.1|1.883e-1930.97hypothetical protein Z043_117937, partial [Sclerop... [more]
gi|1176116343|ref|XP_020629311.1|2.685e-1934.33CCR4-NOT transcription complex subunit 2-like isof... [more]
gi|1176116341|ref|XP_020629310.1|2.688e-1934.33CCR4-NOT transcription complex subunit 2-like isof... [more]
gi|170042857|ref|XP_001849127.1|2.908e-1932.12conserved hypothetical protein [Culex quinquefasci... [more]
gi|907619317|ref|XP_013119562.1|2.994e-1934.02PREDICTED: regulator of gene activity isoform X2 [... [more]
gi|1160103730|ref|XP_020392320.1|2.996e-1930.30CCR4-NOT transcription complex subunit 2 isoform X... [more]
gi|1050386727|gb|OCT88920.1|3.142e-1931.84hypothetical protein XELAEV_18017550mg [Xenopus la... [more]
gi|1263132061|gb|PFX28270.1|3.212e-1933.83CCR4-NOT transcription complex subunit 2 [Stylopho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1034_size68570supercontigscaffold1034_size68570:35479..38153 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1034_size68570:35479..38153-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1034_size68570-snap-gene-0.16 ID=maker-scaffold1034_size68570-snap-gene-0.16|Name=ccr4-not transcription complex subunit 2|organism=Tigriopus kingsejongensis|type=gene|length=2675bp|location=Sequence derived from alignment at scaffold1034_size68570:35479..38153- (Tigriopus kingsejongensis)
CGGATCGTTCGACCAGTTTGAAGGAAACTGCTCTTTGCCGATCCTCTGAC TCTGTATACTTTCGACATCGATGCTTGAACACTAAATTGGCCAGTCCAAG ATTCCAGCGACTAACTCGGCTTGACCATGCTCCACCTCGTCCCGCCCACC TTAGGCTGCTCCAACCTCAATCCCCTGAGCAAGCCCTTCGCGCCCCGCCT CAGTGGCTCGAGCGAGCCCACCTCGCCCACGGGGGGCATGACTGGGGCGG GGGGACCGCCTTTCTTCTTGAATCTGAACAATAACAACAACGCCTTCGTG AGCAAGTACCCGCCCCCACCCTACCCTGGCGTGGACGTAACCACCCTGCC TCCGCCTCTCCCCCCTCAGTCTGGATATGGACCCATTGGATCGCCTTGCG AAAAGCCCACGGTCCTGAGGTACCCCCAATGCGATGGTGGGGGCCGGAAC TTTACGTTTCCCCAACAGTTTAATCCGTTAAAACTGTTTAAAGTTTAATC CGGAGGCTTGATGCCTGGCACGGGAGTCTTGGGAAATTTAAAGCTAATCC AGTCCAGCATGGTGACCCCGTAATCCATGGAGTACTAAAATTCTAGCACT CCATGCCGGAGATGCAAGGGACAATCTCAATCACGGGACATGACAGCTTT TATCCCTTTTAGTTACTCAACTTGTGAGATTTAAGCTAGTTATCATTATT TAATCGTCGTTGGCTCCACTTTTTCTTGATGCATTCAAGACACGTGTTTT TTGTACCACCTGAAGCAATGCTGCAAATTTTGTATCGAAGAGCATCATTG AAACTCGGATGGTCGGATTTCATAGGCAACACGAATTCAAACGGGCCAAA CCCAACTTGTCCAAAGGAAAAGGTATAATCCAAACTTGCCCACTGAGCCA ATCACAGGCCAAATCGAGGATCTAGGAAGGGGTTGAGTCTAATGCGAGAG TGTTAATGAATTTGACATACTCAAGAAAATGAAGAGACCTCGGTAGCACC GAGTTTAGATTGGCCTGTCTTGAAGAGCGGACCTGAGAGATGGGCCTATG AAACGTCGAGAAAGACGCTCTATTTGAAGCTCGAATGCCCACTGGCCAAA CTCTGCCGTCATACTTCTTGGCGGGTTAATCCTCACTTGTCACCCATTCT TTCCGACGTGTCTCCCTTGGGGTGTTTCAGGTCGGACCAGTTCGGTCTGC GCGGTCTGTGGCGCAACATCCAAGACACGCATCGAACCCGCATCCGTCCG CGCATGGCCCACGAGCCCTTCGAGACGACTGTGATGAGCCGAGAGGACTT GGGCTTTTCGGACGAGGTGATCCGATTCCACGGGCCTCGGCTCTTGCCGC ACTTTGAATCACCCTTCAGCTCCAAGCTGAACACGCTCTACTTGGACTAC GACGTGCCCGACGAGTATCGCACGGCCTGGAAGCTCTCGGGCTGCCTGAA AGGCAAGTGGTCCCACTATCTGCCCACGGAGCTCCTGTTCTTCTTGTTCT ACACGGCCGTGGGTGATATTCTCCAACTTGAGGCCGCGGCCAAGCTTTTC GAGCGTGGCTGGAGATTCTACAAGGTAAAACCTCGCTAATCTGGTGGGAG CTTGAGGGTATCACCCCTCGTGGGAGGTGTCTACCTATCTATTATGAGTA ATGCCCAATTGTATGTCAGGAATCGAATGACATGGATACAACACCTTCCG TGTAATATCTTGCCAATAGAGCGAGCTAAAACAGTAGAATAGTTCTGCCT CCTCTCTAAACATGTAGAAGCAAGGTATGCTTCCGATTCGAGCAGTCTGA GGAGCACTGAATCGCCGATCAATACGTTCCTGACACTGAGGAATTGAAGC TCTTGAAGCCTTCTGTTGATCTCATTTTGGCCATGGCACATCGTCATGGG ATCACATGTGTTCGGGAAGGTAACGCGGGTTTATGCAACATTTACCCAAT GTCAACGCGATAACTCTGGGCCCATTGTGCGGAGGCACCTGTGAGACTTC ACTTGAAAGGATCGTTCATAACTGTGTGCGTTATCCATTCCCAGGAGAGA GGCGTCTGGCTATCGCGCAAGCCCAATTGCCGTCCCGAATACGAGAGCAT GACCGAGCAATTTGGCGAGTACCAGTACTTCGACGTCCAATCCTGGGAGC GCAAGTCGGGCAGCTTCAAGTTCAAGCTCGAGGACCTGGCCACCAAGGTC CAGCTGCCTCGGGGCCCCTTTCCCATGGCCAACGGGTTCAACGTGTACCC GCCTCAGCCCCCCAAGCCGGTGGGCTGGCCGCCGCGTCGCGAAATGGGCA AGTCTGCGGCCCCGTGGCACCACGGGTTCGTGCCCCCCTACAACGCCTAC TACTCCACGGTGGTCTGAGGGGCTGGGCGGGCAGAATTTTAAGATGAAGT ATCAAACTGGGCTCAGGTTGATAGCCACGTGTGACTGAACCACTAGCATA AATGTCGAATCAGGGCGACCCTTGACATCCCCACGATTATAAACCAATCA AGAATCTCCTTCCCTCTTCGTCAATTTCTATGAAGAACACCCTTTGGACA AGATCAAAACTTTCTCAACTACGTGTCTACTATTGCCTTCATCCATTGTT TTTATGTTACGTCTTTCATATTCTCTCTATCATTGTATGATGATTGAATC AGATTATGATAAATATATGTACTAA
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Synonyms
The feature 'ccr4-not transcription complex subunit 2' has the following synonyms
Synonym
Tk10485
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