maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1, maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold1034_size68570-snap-gene-0.16-mRNA-1
Unique Namemaker-scaffold1034_size68570-snap-gene-0.16-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1034_size68570supercontigscaffold1034_size68570:35479..38153 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ccr4-not transcription complex subunit 2maker-scaffold1034_size68570-snap-gene-0.16Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1:exon:1127maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1:exon:1127Tigriopus kingsejongensisexon
maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1:exon:1128maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1:exon:1128Tigriopus kingsejongensisexon
maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1:exon:1129maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1:exon:1129Tigriopus kingsejongensisexon
maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1:three_prime_utrmaker-scaffold1034_size68570-snap-gene-0.16-mRNA-1:three_prime_utrTigriopus kingsejongensisexon
maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1:cdsmaker-scaffold1034_size68570-snap-gene-0.16-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1:cdsmaker-scaffold1034_size68570-snap-gene-0.16-mRNA-1:cds-1972894Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1972895auto1972895Tigriopus kingsejongensispolypeptide
Tk10485Tk10485Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk10485

>Tk10485 ID=Tk10485|Name=Tk10485|organism=Tigriopus kingsejongensis|type=polypeptide|length=338bp
LTMLHLVPPTLGCSNLNPLSKPFAPRLSGSSEPTSPTGGMTGAGGPPFFL
NLNNNNNAFVSKYPPPPYPGVDVTTLPPPLPPQSGYGPIGSPCEKPTVLR
SDQFGLRGLWRNIQDTHRTRIRPRMAHEPFETTVMSREDLGFSDEVIRFH
GPRLLPHFESPFSSKLNTLYLDYDVPDEYRTAWKLSGCLKGKWSHYLPTE
LLFFLFYTAVGDILQLEAAAKLFERGWRFYKERGVWLSRKPNCRPEYESM
TEQFGEYQYFDVQSWERKSGSFKFKLEDLATKVQLPRGPFPMANGFNVYP
PQPPKPVGWPPRREMGKSAAPWHHGFVPPYNAYYSTVV
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mRNA from alignment at scaffold1034_size68570:35479..38153-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1 ID=maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1|Name=maker-scaffold1034_size68570-snap-gene-0.16-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=2675bp|location=Sequence derived from alignment at scaffold1034_size68570:35479..38153- (Tigriopus kingsejongensis)
CGGATCGTTCGACCAGTTTGAAGGAAACTGCTCTTTGCCGATCCTCTGAC
TCTGTATACTTTCGACATCGATGCTTGAACACTAAATTGGCCAGTCCAAG
ATTCCAGCGACTAACTCGGCTTGACCATGCTCCACCTCGTCCCGCCCACC
TTAGGCTGCTCCAACCTCAATCCCCTGAGCAAGCCCTTCGCGCCCCGCCT
CAGTGGCTCGAGCGAGCCCACCTCGCCCACGGGGGGCATGACTGGGGCGG
GGGGACCGCCTTTCTTCTTGAATCTGAACAATAACAACAACGCCTTCGTG
AGCAAGTACCCGCCCCCACCCTACCCTGGCGTGGACGTAACCACCCTGCC
TCCGCCTCTCCCCCCTCAGTCTGGATATGGACCCATTGGATCGCCTTGCG
AAAAGCCCACGGTCCTGAGGTACCCCCAATGCGATGGTGGGGGCCGGAAC
TTTACGTTTCCCCAACAGTTTAATCCGTTAAAACTGTTTAAAGTTTAATC
CGGAGGCTTGATGCCTGGCACGGGAGTCTTGGGAAATTTAAAGCTAATCC
AGTCCAGCATGGTGACCCCGTAATCCATGGAGTACTAAAATTCTAGCACT
CCATGCCGGAGATGCAAGGGACAATCTCAATCACGGGACATGACAGCTTT
TATCCCTTTTAGTTACTCAACTTGTGAGATTTAAGCTAGTTATCATTATT
TAATCGTCGTTGGCTCCACTTTTTCTTGATGCATTCAAGACACGTGTTTT
TTGTACCACCTGAAGCAATGCTGCAAATTTTGTATCGAAGAGCATCATTG
AAACTCGGATGGTCGGATTTCATAGGCAACACGAATTCAAACGGGCCAAA
CCCAACTTGTCCAAAGGAAAAGGTATAATCCAAACTTGCCCACTGAGCCA
ATCACAGGCCAAATCGAGGATCTAGGAAGGGGTTGAGTCTAATGCGAGAG
TGTTAATGAATTTGACATACTCAAGAAAATGAAGAGACCTCGGTAGCACC
GAGTTTAGATTGGCCTGTCTTGAAGAGCGGACCTGAGAGATGGGCCTATG
AAACGTCGAGAAAGACGCTCTATTTGAAGCTCGAATGCCCACTGGCCAAA
CTCTGCCGTCATACTTCTTGGCGGGTTAATCCTCACTTGTCACCCATTCT
TTCCGACGTGTCTCCCTTGGGGTGTTTCAGGTCGGACCAGTTCGGTCTGC
GCGGTCTGTGGCGCAACATCCAAGACACGCATCGAACCCGCATCCGTCCG
CGCATGGCCCACGAGCCCTTCGAGACGACTGTGATGAGCCGAGAGGACTT
GGGCTTTTCGGACGAGGTGATCCGATTCCACGGGCCTCGGCTCTTGCCGC
ACTTTGAATCACCCTTCAGCTCCAAGCTGAACACGCTCTACTTGGACTAC
GACGTGCCCGACGAGTATCGCACGGCCTGGAAGCTCTCGGGCTGCCTGAA
AGGCAAGTGGTCCCACTATCTGCCCACGGAGCTCCTGTTCTTCTTGTTCT
ACACGGCCGTGGGTGATATTCTCCAACTTGAGGCCGCGGCCAAGCTTTTC
GAGCGTGGCTGGAGATTCTACAAGGTAAAACCTCGCTAATCTGGTGGGAG
CTTGAGGGTATCACCCCTCGTGGGAGGTGTCTACCTATCTATTATGAGTA
ATGCCCAATTGTATGTCAGGAATCGAATGACATGGATACAACACCTTCCG
TGTAATATCTTGCCAATAGAGCGAGCTAAAACAGTAGAATAGTTCTGCCT
CCTCTCTAAACATGTAGAAGCAAGGTATGCTTCCGATTCGAGCAGTCTGA
GGAGCACTGAATCGCCGATCAATACGTTCCTGACACTGAGGAATTGAAGC
TCTTGAAGCCTTCTGTTGATCTCATTTTGGCCATGGCACATCGTCATGGG
ATCACATGTGTTCGGGAAGGTAACGCGGGTTTATGCAACATTTACCCAAT
GTCAACGCGATAACTCTGGGCCCATTGTGCGGAGGCACCTGTGAGACTTC
ACTTGAAAGGATCGTTCATAACTGTGTGCGTTATCCATTCCCAGGAGAGA
GGCGTCTGGCTATCGCGCAAGCCCAATTGCCGTCCCGAATACGAGAGCAT
GACCGAGCAATTTGGCGAGTACCAGTACTTCGACGTCCAATCCTGGGAGC
GCAAGTCGGGCAGCTTCAAGTTCAAGCTCGAGGACCTGGCCACCAAGGTC
CAGCTGCCTCGGGGCCCCTTTCCCATGGCCAACGGGTTCAACGTGTACCC
GCCTCAGCCCCCCAAGCCGGTGGGCTGGCCGCCGCGTCGCGAAATGGGCA
AGTCTGCGGCCCCGTGGCACCACGGGTTCGTGCCCCCCTACAACGCCTAC
TACTCCACGGTGGTCTGAGGGGCTGGGCGGGCAGAATTTTAAGATGAAGT
ATCAAACTGGGCTCAGGTTGATAGCCACGTGTGACTGAACCACTAGCATA
AATGTCGAATCAGGGCGACCCTTGACATCCCCACGATTATAAACCAATCA
AGAATCTCCTTCCCTCTTCGTCAATTTCTATGAAGAACACCCTTTGGACA
AGATCAAAACTTTCTCAACTACGTGTCTACTATTGCCTTCATCCATTGTT
TTTATGTTACGTCTTTCATATTCTCTCTATCATTGTATGATGATTGAATC
AGATTATGATAAATATATGTACTAA
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