cytochrome oxidase subunit partial, maker-scaffold1053_size66761-snap-gene-0.12 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cytochrome oxidase subunit partial vs. SwissProt
Match: gi|205696374|sp|B0FWC7.2|COX1_AEDAE (RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I) HSP 1 Score: 279.641 bits (714), Expect = 6.292e-91 Identity = 163/270 (60.37%), Postives = 192/270 (71.11%), Query Frame = 0 Query: 5 YSSCPKIFRAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAKD-------TLREKNHFLSFFALV-----------------------PRISFSL-------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 ++ P + H G SVD AIFSLHLAGISS+LGAVNFITT+ N+R G LD +PLFV +V++TAILLLLSLPVLAGAITMLLTDRNLN+SF+D GGGDPILYQHLFWFFGHPEVYILILPGFG+ISHII+QE+ KKE FG LGM+YAM +IG+LGF+V + + +F S ++ P + +SL GGLTG+VLANSS+DIVLHDTYYVVAHFHYVL MGAVFA+ A FIH Sbjct: 125 WTVYPPLSSGTAHAGASVDLAIFSLHLAGISSILGAVNFITTVINMRSSGITLDRLPLFVWSVVITAILLLLSLPVLAGAITMLLTDRNLNTSFFDPIGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIITQESGKKETFGTLGMIYAMLTIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQLTYSPALLWSLGFVFLFTVGGLTGVVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFIH 394
BLAST of cytochrome oxidase subunit partial vs. SwissProt
Match: gi|425906042|sp|Q34391.2|COX1_DROSE (RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I) HSP 1 Score: 277.33 bits (708), Expect = 5.542e-90 Identity = 162/270 (60.00%), Postives = 192/270 (71.11%), Query Frame = 0 Query: 5 YSSCPKIFRAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAKD-------TLREKNHFLSFFALV-----------------------PRISFSL-------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 ++ P + H G SVD AIFSLHLAGISS+LGAVNFITT+ N+R G LD +PLFV +V++TA+LLLLSLPVLAGAITMLLTDRNLN+SF+D GGGDPILYQHLFWFFGHPEVYILILPGFG+ISHIISQE+ KKE FG LGM+YAM +IG+LGF+V + + +F S ++ P I ++L GGLTG+VLANSS+DI+LHDTYYVVAHFHYVL MGAVFA+ A FIH Sbjct: 124 WTVYPPLSAGIAHGGASVDLAIFSLHLAGISSILGAVNFITTVINMRSTGISLDRMPLFVWSVVITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISQESGKKETFGSLGMIYAMLAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQLSYSPAILWALGFVFLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAVFAIMAGFIH 393
BLAST of cytochrome oxidase subunit partial vs. SwissProt
Match: gi|425906043|sp|P00400.2|COX1_DROYA (RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I) HSP 1 Score: 277.33 bits (708), Expect = 5.542e-90 Identity = 162/270 (60.00%), Postives = 192/270 (71.11%), Query Frame = 0 Query: 5 YSSCPKIFRAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAKD-------TLREKNHFLSFFALV-----------------------PRISFSL-------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 ++ P + H G SVD AIFSLHLAGISS+LGAVNFITT+ N+R G LD +PLFV +V++TA+LLLLSLPVLAGAITMLLTDRNLN+SF+D GGGDPILYQHLFWFFGHPEVYILILPGFG+ISHIISQE+ KKE FG LGM+YAM +IG+LGF+V + + +F S ++ P I ++L GGLTG+VLANSS+DI+LHDTYYVVAHFHYVL MGAVFA+ A FIH Sbjct: 124 WTVYPPLSSGIAHGGASVDLAIFSLHLAGISSILGAVNFITTVINMRSTGITLDRMPLFVWSVVITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISQESGKKETFGSLGMIYAMLAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQLSYSPAILWALGFVFLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAVFAIMAGFIH 393
BLAST of cytochrome oxidase subunit partial vs. SwissProt
Match: gi|442570082|sp|P00399.2|COX1_DROME (RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I) HSP 1 Score: 277.33 bits (708), Expect = 5.542e-90 Identity = 162/270 (60.00%), Postives = 192/270 (71.11%), Query Frame = 0 Query: 5 YSSCPKIFRAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAKD-------TLREKNHFLSFFALV-----------------------PRISFSL-------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 ++ P + H G SVD AIFSLHLAGISS+LGAVNFITT+ N+R G LD +PLFV +V++TA+LLLLSLPVLAGAITMLLTDRNLN+SF+D GGGDPILYQHLFWFFGHPEVYILILPGFG+ISHIISQE+ KKE FG LGM+YAM +IG+LGF+V + + +F S ++ P I ++L GGLTG+VLANSS+DI+LHDTYYVVAHFHYVL MGAVFA+ A FIH Sbjct: 124 WTVYPPLSAGIAHGGASVDLAIFSLHLAGISSILGAVNFITTVINMRSTGISLDRMPLFVWSVVITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISQESGKKETFGSLGMIYAMLAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQLSYSPAILWALGFVFLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAVFAIMAGFIH 393
BLAST of cytochrome oxidase subunit partial vs. SwissProt
Match: gi|425906066|sp|Q34388.3|COX1_DROSI (RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I) HSP 1 Score: 276.944 bits (707), Expect = 6.377e-90 Identity = 162/270 (60.00%), Postives = 192/270 (71.11%), Query Frame = 0 Query: 5 YSSCPKIFRAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAKD-------TLREKNHFLSFFALV-----------------------PRISFSL-------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 ++ P + H G SVD AIFSLHLAGISS+LGAVNFITT+ N+R G LD +PLFV +V++TA+LLLLSLPVLAGAITMLLTDRNLN+SF+D GGGDPILYQHLFWFFGHPEVYILILPGFG+ISHIISQE+ KKE FG LGM+YAM +IG+LGF+V + + +F S ++ P I ++L GGLTG+VLANSS+DI+LHDTYYVVAHFHYVL MGAVFA+ A FIH Sbjct: 124 WTVYPPLSAGIAHGGASVDLAIFSLHLAGISSILGAVNFITTVINMRSTGISLDRMPLFVWSVVITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISQESGKKETFGSLGMIYAMLAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQLSYSPAILWALGFVFLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAVFAIMAGFIH 393
BLAST of cytochrome oxidase subunit partial vs. SwissProt
Match: gi|425906072|sp|Q34345.3|COX1_DROMA (RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I) HSP 1 Score: 276.944 bits (707), Expect = 7.259e-90 Identity = 162/270 (60.00%), Postives = 192/270 (71.11%), Query Frame = 0 Query: 5 YSSCPKIFRAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAKD-------TLREKNHFLSFFALV-----------------------PRISFSL-------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 ++ P + H G SVD AIFSLHLAGISS+LGAVNFITT+ N+R G LD +PLFV +V++TA+LLLLSLPVLAGAITMLLTDRNLN+SF+D GGGDPILYQHLFWFFGHPEVYILILPGFG+ISHIISQE+ KKE FG LGM+YAM +IG+LGF+V + + +F S ++ P I ++L GGLTG+VLANSS+DI+LHDTYYVVAHFHYVL MGAVFA+ A FIH Sbjct: 124 WTVYPPLSAGIAHGGASVDLAIFSLHLAGISSILGAVNFITTVINMRSTGISLDRMPLFVWSVVITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISQESGKKETFGSLGMIYAMLAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQLSYSPAILWALGFVFLFTVGGLTGVVLANSSVDIILHDTYYVVAHFHYVLSMGAVFAIMAGFIH 393
BLAST of cytochrome oxidase subunit partial vs. SwissProt
Match: gi|461780|sp|P34838.1|COX1_ANOGA (RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I) HSP 1 Score: 274.248 bits (700), Expect = 8.539e-89 Identity = 161/270 (59.63%), Postives = 192/270 (71.11%), Query Frame = 0 Query: 5 YSSCPKIFRAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAKD-------TLREKNHFLS--FFALVP---------------RISFS-------------LYGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 ++ P + H G SVD AIFSLHLAGISS+LGAVNFITT+ N+R G LD +PLFV +V++TA+LLLLSLPVLAGAITMLLTDRNLN+SF+D GGGDPILYQHLFWFFGHPEVYILILPGFG+ISHII+QE+ KKE FG LGM+YAM +IG+LGF+V + + +F S VP ++++S GGLTG+VLANSS+DIVLHDTYYVVAHFHYVL MGAVFA+ A F+H Sbjct: 125 WTVYPPLSSGIAHAGASVDLAIFSLHLAGISSILGAVNFITTVINMRSPGITLDRMPLFVWSVVITAVLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIITQESGKKETFGNLGMIYAMLAIGLLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQLTYSPAMLWAFGFVFLFTVGGLTGVVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVH 394
BLAST of cytochrome oxidase subunit partial vs. SwissProt
Match: gi|3121895|sp|Q37705.1|COX1_ARTSF (RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I) HSP 1 Score: 273.478 bits (698), Expect = 1.668e-88 Identity = 158/270 (58.52%), Postives = 190/270 (70.37%), Query Frame = 0 Query: 5 YSSCPKIFRAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAKD-------TLREKNHFL-----------------------SFFALVPRISFSL-------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 ++ P + A H G SVD AIFSLHLAG+SS+LGAVNFITTI N+R +D +PLFV AV +TA+LLLLSLPVLAGAITMLLTDRNLN+SF+D GGGDPILYQHLFWFFGHPEVYILILPGFG++SHIISQE+ KKE FG LGM+YAM +IG+LGF+V + + +F + + P + ++L GGLTG+VL+NSS+DIVLHDTYYVVAHFHYVL MGAVFA+ A F+H Sbjct: 124 WTVYPPLSSAIAHAGPSVDLAIFSLHLAGVSSILGAVNFITTIINMRPQSMSIDRMPLFVWAVGITAVLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMVSHIISQESGKKEAFGTLGMIYAMLAIGILGFVVWAHHMFTVGMDVDTRAYFTAATMIIAIPTGIKIFSWIGTLHGTRLTMTPSMLWALGFVFLFTVGGLTGVVLSNSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVH 393
BLAST of cytochrome oxidase subunit partial vs. SwissProt
Match: gi|115502376|sp|P50669.2|COX1_CHOFU (RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I >gi|115502377|sp|P67793.2|COX1_CHOOC RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I) HSP 1 Score: 271.552 bits (693), Expect = 1.005e-87 Identity = 158/270 (58.52%), Postives = 188/270 (69.63%), Query Frame = 0 Query: 5 YSSCPKIFRAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAKD-------TLREKNHFLSFFALV-----------------------PRISFSL-------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 ++ P + H G SVD AIFSLHLAGISS+LGAVNFITTI N+R LD +PLFV +V +TA+LLLLSLPVLAGAITMLLTDRNLN+SF+D GGGDPILYQHLFWFFGHPEVYILILPGFG+ISHIISQE+ KKE FG LGM+YAM +IG+LGF+V + + +F S ++ P + +SL GGLTG++LANSS+D+ LHDTYYVVAHFHYVL MGAVFA+ F+H Sbjct: 125 WTVYPPLSSNIAHSGSSVDLAIFSLHLAGISSILGAVNFITTIINMRPNNMSLDQMPLFVWSVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISQESGKKETFGCLGMIYAMMAIGLLGFVVWAHHMFTVGMDIDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSMLWSLGFVFLFTVGGLTGVILANSSIDVTLHDTYYVVAHFHYVLSMGAVFAIMGGFVH 394
BLAST of cytochrome oxidase subunit partial vs. SwissProt
Match: gi|115502375|sp|P50668.2|COX1_CHOBI (RecName: Full=Cytochrome c oxidase subunit 1; AltName: Full=Cytochrome c oxidase polypeptide I) HSP 1 Score: 271.552 bits (693), Expect = 1.027e-87 Identity = 158/270 (58.52%), Postives = 188/270 (69.63%), Query Frame = 0 Query: 5 YSSCPKIFRAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAKD-------TLREKNHFLSFFALV-----------------------PRISFSL-------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 ++ P + H G SVD AIFSLHLAGISS+LGAVNFITTI N+R LD +PLFV +V +TA+LLLLSLPVLAGAITMLLTDRNLN+SF+D GGGDPILYQHLFWFFGHPEVYILILPGFG+ISHIISQE+ KKE FG LGM+YAM +IG+LGF+V + + +F S ++ P + +SL GGLTG++LANSS+D+ LHDTYYVVAHFHYVL MGAVFA+ F+H Sbjct: 125 WTVYPPLSSNIAHSGSSVDLAIFSLHLAGISSILGAVNFITTIINMRPNNMSLDQMPLFVWSVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIISQESGKKETFGCLGMIYAMMAIGLLGFVVWAHHMFTVGMDIDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSMLWSLGFVFLFTVGGLTGVILANSSIDVTLHDTYYVVAHFHYVLSMGAVFAIMGGFVH 394
BLAST of cytochrome oxidase subunit partial vs. nr
Match: gi|410935623|gb|AFV94437.1| (cytochrome oxidase subunit I, partial (mitochondrion) [Tigriopus sp. 3 SL-2012]) HSP 1 Score: 288.5 bits (737), Expect = 4.223e-94 Identity = 182/263 (69.20%), Postives = 193/263 (73.38%), Query Frame = 0 Query: 13 RAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAK--------DTLREKNHFLS------------FFALV-------PRISFSL-----------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 A GH G SVD AIFSLHLAG+SSLLGAVNFI+TI NLRVFG +LD VPLFV +VLLTAILLLLSLPVLAGAITMLLTDRNLNS FYDV GGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQET KKE FGVLGM+YAMASIGVLGF+V DT + +F S F+ V P S S GGLTG+VL+NSSLDIVLHDTYYVVAHFHYVL MGAVFAL IH Sbjct: 71 SAVGHAGSSVDFAIFSLHLAGVSSLLGAVNFISTIFNLRVFGLYLDLVPLFVWSVLLTAILLLLSLPVLAGAITMLLTDRNLNSCFYDVSGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETSKKEVFGVLGMIYAMASIGVLGFVVWAHHMFTVGLDT-DTRAYFTSATMIIAVPTGIKIFSWVGTLYGSKPSFSASFCWALGFIFLFTLGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFALLGSLIH 332
BLAST of cytochrome oxidase subunit partial vs. nr
Match: gi|410935637|gb|AFV94444.1| (cytochrome oxidase subunit I, partial (mitochondrion) [Tigriopus sp. 3 SL-2012]) HSP 1 Score: 288.5 bits (737), Expect = 6.866e-94 Identity = 182/263 (69.20%), Postives = 193/263 (73.38%), Query Frame = 0 Query: 13 RAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAK--------DTLREKNHFLS------------FFALV-------PRISFSL-----------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 A GH G SVD AIFSLHLAG+SSLLGAVNFI+TI NLRVFG +LD VPLFV +VLLTAILLLLSLPVLAGAITMLLTDRNLNS FYDV GGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQET KKE FGVLGM+YAMASIGVLGF+V DT + +F S F+ V P S S GGLTG+VL+NSSLDIVLHDTYYVVAHFHYVL MGAVFAL IH Sbjct: 89 SAVGHAGSSVDFAIFSLHLAGVSSLLGAVNFISTIFNLRVFGLYLDLVPLFVWSVLLTAILLLLSLPVLAGAITMLLTDRNLNSCFYDVSGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETSKKEVFGVLGMIYAMASIGVLGFVVWAHHMFTVGLDT-DTRAYFTSATMIIAVPTGIKIFSWVGTLYGSKPSFSASFCWALGFIFLFTLGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFALLGSLIH 350
BLAST of cytochrome oxidase subunit partial vs. nr
Match: gi|410935639|gb|AFV94445.1| (cytochrome oxidase subunit I, partial (mitochondrion) [Tigriopus sp. 3 SL-2012]) HSP 1 Score: 288.5 bits (737), Expect = 7.401e-94 Identity = 182/263 (69.20%), Postives = 193/263 (73.38%), Query Frame = 0 Query: 13 RAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAK--------DTLREKNHFLS------------FFALV-------PRISFSL-----------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 A GH G SVD AIFSLHLAG+SSLLGAVNFI+TI NLRVFG +LD VPLFV +VLLTAILLLLSLPVLAGAITMLLTDRNLNS FYDV GGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQET KKE FGVLGM+YAMASIGVLGF+V DT + +F S F+ V P S S GGLTG+VL+NSSLDIVLHDTYYVVAHFHYVL MGAVFAL IH Sbjct: 87 SAVGHAGSSVDFAIFSLHLAGVSSLLGAVNFISTIFNLRVFGLYLDLVPLFVWSVLLTAILLLLSLPVLAGAITMLLTDRNLNSCFYDVSGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETSKKEVFGVLGMIYAMASIGVLGFVVWAHHMFTVGLDT-DTRAYFTSATMIIAVPTGIKIFSWVGTLYGSKPSFSASFCWALGFIFLFTLGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFALLGSLIH 348
BLAST of cytochrome oxidase subunit partial vs. nr
Match: gi|193201179|gb|ACF15640.1| (cytochrome oxidase subunit 1, partial (mitochondrion) [Calanus sinicus]) HSP 1 Score: 288.5 bits (737), Expect = 9.180e-94 Identity = 166/270 (61.48%), Postives = 197/270 (72.96%), Query Frame = 0 Query: 5 YSSCPKIFRAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAKDTL-------REKNHFLSF-----------------------FALVPRISFSL-------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 ++ P + H G SVD AIFSLHLAG+SS+LGAVNFI+T+ NLRVFG LD +PLF +VL+TA+LLLLSLPVLAGAITMLLTDRNLN++FYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHI++QE+ KKE FGVLGM+YAM +IGVLGF+V + + +F + F++ P + +SL GGLTG+VL+NSSLD+VLHDTYYVVAHFHYVL MGAVFAL A FI+ Sbjct: 44 WTVYPPLSSNIAHAGASVDFAIFSLHLAGVSSILGAVNFISTLGNLRVFGMLLDRMPLFAWSVLITAVLLLLSLPVLAGAITMLLTDRNLNTTFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIVAQESGKKETFGVLGMIYAMLAIGVLGFVVWAHHMFTVGMDADTRAYFTTATMIIAVPTGIKVFSWLGTFHGVRFSMSPSLYWSLGFVFLFTVGGLTGIVLSNSSLDVVLHDTYYVVAHFHYVLSMGAVFALMAAFIN 313
BLAST of cytochrome oxidase subunit partial vs. nr
Match: gi|410935655|gb|AFV94453.1| (cytochrome oxidase subunit I, partial (mitochondrion) [Tigriopus sp. 3 SL-2012]) HSP 1 Score: 288.115 bits (736), Expect = 1.111e-93 Identity = 182/263 (69.20%), Postives = 193/263 (73.38%), Query Frame = 0 Query: 13 RAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAK--------DTLREKNHFLS------------FFALV-------PRISFSL-----------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 A GH G SVD AIFSLHLAG+SSLLGAVNFI+TI NLRVFG +LD VPLFV +VLLTAILLLLSLPVLAGAITMLLTDRNLNS FYDV GGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQET KKE FGVLGM+YAMASIGVLGF+V DT + +F S F+ V P S S GGLTG+VL+NSSLDIVLHDTYYVVAHFHYVL MGAVFAL IH Sbjct: 87 SAVGHAGSSVDFAIFSLHLAGVSSLLGAVNFISTIFNLRVFGLYLDLVPLFVWSVLLTAILLLLSLPVLAGAITMLLTDRNLNSCFYDVSGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETSKKEVFGVLGMIYAMASIGVLGFVVWAHHMFTVGLDT-DTRAYFTSATMIIAVPTGIKIFSWVGTLYGSKPSFSASFCWALGFIFLFTLGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFALLGSLIH 348
BLAST of cytochrome oxidase subunit partial vs. nr
Match: gi|193201159|gb|ACF15630.1| (cytochrome oxidase subunit 1, partial (mitochondrion) [Calanus sinicus] >gi|193201161|gb|ACF15631.1| cytochrome oxidase subunit 1, partial (mitochondrion) [Calanus sinicus] >gi|193201163|gb|ACF15632.1| cytochrome oxidase subunit 1, partial (mitochondrion) [Calanus sinicus] >gi|193201165|gb|ACF15633.1| cytochrome oxidase subunit 1, partial (mitochondrion) [Calanus sinicus] >gi|193201167|gb|ACF15634.1| cytochrome oxidase subunit 1, partial (mitochondrion) [Calanus sinicus] >gi|193201169|gb|ACF15635.1| cytochrome oxidase subunit 1, partial (mitochondrion) [Calanus sinicus] >gi|193201171|gb|ACF15636.1| cytochrome oxidase subunit 1, partial (mitochondrion) [Calanus sinicus] >gi|193201173|gb|ACF15637.1| cytochrome oxidase subunit 1, partial (mitochondrion) [Calanus sinicus] >gi|193201175|gb|ACF15638.1| cytochrome oxidase subunit 1, partial (mitochondrion) [Calanus sinicus] >gi|193201183|gb|ACF15642.1| cytochrome oxidase subunit 1, partial (mitochondrion) [Calanus sinicus]) HSP 1 Score: 288.115 bits (736), Expect = 1.141e-93 Identity = 166/270 (61.48%), Postives = 197/270 (72.96%), Query Frame = 0 Query: 5 YSSCPKIFRAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAKDTL-------REKNHFLSF-----------------------FALVPRISFSL-------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 ++ P + H G SVD AIFSLHLAG+SS+LGAVNFI+T+ NLRVFG LD +PLF +VL+TA+LLLLSLPVLAGAITMLLTDRNLN++FYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHI++QE+ KKE FGVLGM+YAM +IGVLGF+V + + +F + F++ P + +SL GGLTG+VL+NSSLD+VLHDTYYVVAHFHYVL MGAVFAL A FI+ Sbjct: 44 WTVYPPLSSNIAHAGASVDFAIFSLHLAGVSSILGAVNFISTLGNLRVFGMLLDRMPLFAWSVLITAVLLLLSLPVLAGAITMLLTDRNLNTTFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIVAQESGKKETFGVLGMIYAMLAIGVLGFVVWAHHMFTVGMDADTRAYFTTATMIIAVPTGIKVFSWLGTFHGVRFSMSPSLYWSLGFVFLFTVGGLTGIVLSNSSLDVVLHDTYYVVAHFHYVLSMGAVFALMAAFIN 313
BLAST of cytochrome oxidase subunit partial vs. nr
Match: gi|193201185|gb|ACF15643.1| (cytochrome oxidase subunit 1, partial (mitochondrion) [Calanus sinicus]) HSP 1 Score: 288.115 bits (736), Expect = 1.154e-93 Identity = 166/270 (61.48%), Postives = 197/270 (72.96%), Query Frame = 0 Query: 5 YSSCPKIFRAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAKDTL-------REKNHFLSF-----------------------FALVPRISFSL-------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 ++ P + H G SVD AIFSLHLAG+SS+LGAVNFI+T+ NLRVFG LD +PLF +VL+TA+LLLLSLPVLAGAITMLLTDRNLN++FYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHI++QE+ KKE FGVLGM+YAM +IGVLGF+V + + +F + F++ P + +SL GGLTG+VL+NSSLD+VLHDTYYVVAHFHYVL MGAVFAL A FI+ Sbjct: 44 WTVYPPLSSNIAHAGASVDFAIFSLHLAGVSSILGAVNFISTLGNLRVFGMLLDRMPLFAWSVLITAVLLLLSLPVLAGAITMLLTDRNLNTTFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIVAQESGKKETFGVLGMIYAMLAIGVLGFVVWAHHMFTVGMDADTRAYFTTATMIIAVPTGIKVFSWLGTFHGVRFSMSPSLYWSLGFVFLFTVGGLTGIVLSNSSLDVVLHDTYYVVAHFHYVLSMGAVFALMAAFIN 313
BLAST of cytochrome oxidase subunit partial vs. nr
Match: gi|410935657|gb|AFV94454.1| (cytochrome oxidase subunit I, partial (mitochondrion) [Tigriopus sp. 3 SL-2012]) HSP 1 Score: 287.73 bits (735), Expect = 1.323e-93 Identity = 182/263 (69.20%), Postives = 193/263 (73.38%), Query Frame = 0 Query: 13 RAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAK--------DTLREKNHFLS------------FFALV-------PRISFSL-----------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 A GH G SVD AIFSLHLAG+SSLLGAVNFI+TI NLRVFG +LD VPLFV +VLLTAILLLLSLPVLAGAITMLLTDRNLNS FYDV GGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQET KKE FGVLGM+YAMASIGVLGF+V DT + +F S F+ V P S S GGLTG+VL+NSSLDIVLHDTYYVVAHFHYVL MGAVFAL IH Sbjct: 87 SAVGHAGSSVDFAIFSLHLAGVSSLLGAVNFISTIFNLRVFGLYLDLVPLFVWSVLLTAILLLLSLPVLAGAITMLLTDRNLNSCFYDVSGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETSKKEVFGVLGMIYAMASIGVLGFVVWAHHMFTVGLDT-DTRAYFTSATMIIAVPTGIKIFSWVGTLYGSKPSFSASFCWALGFIFLFTLGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFALLGSLIH 348
BLAST of cytochrome oxidase subunit partial vs. nr
Match: gi|356995760|dbj|BAL14675.1| (cytochrome c oxidase I, partial (mitochondrion) [Bestiolina similis]) HSP 1 Score: 288.886 bits (738), Expect = 1.508e-93 Identity = 167/270 (61.85%), Postives = 194/270 (71.85%), Query Frame = 0 Query: 5 YSSCPKIFRAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAKDTL-------REKNHFLSF-----------------------FALVPRISFSL-------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 ++ P + H G SVD AIFSLHLAG+SS+LGAVNFI+T+ NLRVFG LD +PLF AVL+TAILLLLSLPVLAGAITMLLTDRNLN+SFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHI++QE+ KKE FG+LGMVYAM +IG+LGF+V + + +F + F P + +SL GGLTG+VL+NSSLDIVLHDTYYVVAHFHYVL MGAVFAL F++ Sbjct: 99 WTVYPPLSSNIAHAGASVDFAIFSLHLAGVSSILGAVNFISTLGNLRVFGMLLDRMPLFAWAVLITAILLLLSLPVLAGAITMLLTDRNLNTSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIVAQESGKKETFGILGMVYAMLAIGMLGFVVWAHHMFTVGMDADTRAYFTTATMIIAVPTGIKIFSWLGTFHGVRFNFSPSLYWSLGFVFLFTVGGLTGIVLSNSSLDIVLHDTYYVVAHFHYVLSMGAVFALMGSFVN 368
BLAST of cytochrome oxidase subunit partial vs. nr
Match: gi|259648287|dbj|BAI40451.1| (cytochrome oxidase subunit I, partial (mitochondrion) [Sinodiaptomus valkanovi]) HSP 1 Score: 288.5 bits (737), Expect = 1.802e-93 Identity = 167/270 (61.85%), Postives = 194/270 (71.85%), Query Frame = 0 Query: 5 YSSCPKIFRAEGHEGISVDCAIFSLHLAGISSLLGAVNFITTIANLRVFGFHLDTVPLFVLAVLLTAILLLLSLPVLAGAITMLLTDRNLNSSFYDVGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIISQETMKKEPFGVLGMVYAMASIGVLGFMVAKDTL-------REKNHFLSF-----------------------FALVPRISFSL-------YGGLTGLVLANSSLDIVLHDTYYVVAHFHYVLRMGAVFALTARFIH 237 ++ P + H G SVD AIFSLHLAG+SS+LGAVNFI+T+ NLR FG LD +PLF AVL+TAILLLLSLPVLAGAITMLLTDRNLNSSFYD GGGGDPILYQHLFWFFGHPEVYILILPGFGLISHI++QE+ KKE FGVLGMVYAM +IGVLGF+V + + +F S F++ P + ++L GGLTG+VL+NSSLD+VLHDTYYVVAHFHYVL MGAVFAL F++ Sbjct: 101 WTVYPPLSSNIAHAGSSVDFAIFSLHLAGVSSILGAVNFISTLGNLRAFGMILDRMPLFAWAVLITAILLLLSLPVLAGAITMLLTDRNLNSSFYDAGGGGDPILYQHLFWFFGHPEVYILILPGFGLISHIVAQESGKKETFGVLGMVYAMLAIGVLGFVVWAHHMFTVGMDADTRAYFTSATMIIAVPTGIKIFSWLGTLHGVRFSMSPSLYWALGFIFLFTVGGLTGVVLSNSSLDVVLHDTYYVVAHFHYVLSMGAVFALVGAFVN 370 The following BLAST results are available for this feature:
BLAST of cytochrome oxidase subunit partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 0
BLAST of cytochrome oxidase subunit partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of cytochrome oxidase subunit partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1053_size66761:47298..48771- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1053_size66761-snap-gene-0.12 ID=maker-scaffold1053_size66761-snap-gene-0.12|Name=cytochrome oxidase subunit partial|organism=Tigriopus kingsejongensis|type=gene|length=1474bp|location=Sequence derived from alignment at scaffold1053_size66761:47298..48771- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cytochrome oxidase subunit partial' has the following synonyms
Add to Basket
|