transposase, maker-scaffold105_size367834-snap-gene-2.30 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of transposase vs. L. salmonis genes
Match: EMLSAG00000008303 (supercontig:LSalAtl2s:LSalAtl2s503:210067:213886:1 gene:EMLSAG00000008303 transcript:EMLSAT00000008303 description:"snap_masked-LSalAtl2s503-processed-gene-2.8") HSP 1 Score: 55.4546 bits (132), Expect = 3.316e-9 Identity = 40/159 (25.16%), Postives = 76/159 (47.80%), Query Frame = 0 Query: 3 VFDIRRRFREHGTTTRKSGQGRKRSVRTKAIIAAVQSRIKRNPVRTIRGIANSMGIAKTTIERVVKEDIGAKSRARRKKHLINQNTKAKRLARSKVLLNFMK-NGPPVILYLDEKLFRVARVSNSQTDSPIEVQPWKAGLLLGTALYLSTSSLTMITSS 160 V+ I + G K+ R +RT + ++ IK +P ++ + + G++K + + V ED+G +S K+H++ + KA RLA LLN ++ +G +I + DEK + R N + D + + + + T S +L +I S+ Sbjct: 19 VYRIFNAWEIKGKFCCKAHSMRSDRIRTFRFLEGLRKSIKASPGTSLSRLVKNXGVSKQLVSKAVNEDLGYRSYRMVKQHILTASMKATRLANGMRLLNDLESHGGRIIFFSDEKNWTFNRSYNVRNDKWLAKEKEEVPAVFITKFPASVMTLGVICST 177
BLAST of transposase vs. L. salmonis genes
Match: EMLSAG00000007738 (supercontig:LSalAtl2s:LSalAtl2s44:1499302:1502018:-1 gene:EMLSAG00000007738 transcript:EMLSAT00000007738 description:"snap-LSalAtl2s44-processed-gene-14.82") HSP 1 Score: 52.7582 bits (125), Expect = 2.171e-8 Identity = 32/104 (30.77%), Postives = 60/104 (57.69%), Query Frame = 0 Query: 2 AVFDIRRRFREHGTTTRKSGQGRKRSVRTKAII-AAVQSRIKRNPVRTIRGIANSMGIAKTTIERVVKEDIGAKSRARRKKHLINQNTKAKRLARSKVLLNFMK 104 +++ ++ + E + + GR +SVRT+++I ++V+++I N I + + + +T + VVK+D+G KSR K + + KRL RSK+LLN +K Sbjct: 47 TLYNTKKIYNETESFVDRDRSGRPKSVRTESLIRSSVKAKIDTNFCDNIWQMVRDLRVHETAVWYVVKKDLGLKSRGVTKVQGLTALQRPKRLERSKILLNKLK 150
BLAST of transposase vs. L. salmonis genes
Match: EMLSAG00000012106 (supercontig:LSalAtl2s:LSalAtl2s868:259044:273007:1 gene:EMLSAG00000012106 transcript:EMLSAT00000012106 description:"augustus-LSalAtl2s868-processed-gene-1.7") HSP 1 Score: 50.447 bits (119), Expect = 1.558e-7 Identity = 26/96 (27.08%), Postives = 49/96 (51.04%), Query Frame = 0 Query: 3 VFDIRRRFREHGTTTRKSGQGRKRSVRTKAIIAAVQSRIKRNPVRTIRGIANSMGIAKTTIERVVKEDIGAKSRARRKKHLINQNTKAKRLARSKV 98 VF + + ++K+G GR + I++ ++ +IK NP +++ + N+ +A TI + VK D+G S R +HL+ + K +KV Sbjct: 35 VFKVANMKKNGEYLSKKAGSGRXNLKKDLEILSNLEKKIKDNPTKSMNHLVNNFFVAARTIRKAVKGDLGFFSYTRTPRHLLTKKKSNKTFFNTKV 130
BLAST of transposase vs. nr
Match: gi|1698453|gb|AAB47739.1| (transposase [Bombyx mori]) HSP 1 Score: 86.6557 bits (213), Expect = 9.962e-16 Identity = 49/130 (37.69%), Postives = 72/130 (55.38%), Query Frame = 0 Query: 1 MAVFDIRRRFREHGTTTRKSGQGRKRSVRTKAIIAAVQSRIKRNPVRTIRGIANSMGIAKTTIERVVKEDIGAKSRARRKKHLINQNTKAKRLARSKVLLN-FMKNGPPVILYLDEKLFRVARVSNSQTD 129 M V+ R E + + GR RSVRTK ++ AV+ RI+RNPVR + ++ M IA T+ R++K+D+G + RR H + N K R+ +SK LL + K G IL+ DE F + + N Q D Sbjct: 37 MFVYRAINRCNETSSVCDRKRSGRPRSVRTKKVVKAVRERIRRNPVRKQKILSREMKIAPRTMSRILKDDLGLAAYKRRTGHFLTDNLKENRVVKSKQLLKRYAKGGHRKILFTDENFFTIEQHFNKQND 166
BLAST of transposase vs. nr
Match: gi|1098714058|ref|WP_071290505.1| (hypothetical protein [Acinetobacter baumannii] >gi|1096673711|gb|OIF54421.1| hypothetical protein A7M46_17770 [Acinetobacter baumannii]) HSP 1 Score: 86.2705 bits (212), Expect = 1.723e-15 Identity = 49/128 (38.28%), Postives = 75/128 (58.59%), Query Frame = 0 Query: 3 VFDIRRRFREHGTTTRKSGQGRKRSVRTKAIIAAVQSRIKRNPVRTIRGIANSMGIAKTTIERVVKEDIGAKSRARRKKHLINQNTKAKRLARSKVLLN-FMKNGPPVILYLDEKLFRVARVSNSQTD 129 V+ +R+ E + +S GR RSVRT A+I AV++RI+RNP R + +A MG+++TT++RV+ ED+G ++ R+ H +N RL R + LL + IL+ DEK+F V N Q D Sbjct: 39 VYRTIKRYNEDSSVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKRKQKLLALQMGLSRTTVKRVLNEDLGLRAYRRKTGHRLNARLMDLRLKRCRALLKRYAGKKYREILFSDEKIFTVGESYNKQND 166
BLAST of transposase vs. nr
Match: gi|22770470|gb|AAN06610.1|AF461149_1 (transposase [Bombyx mori]) HSP 1 Score: 85.5001 bits (210), Expect = 2.649e-15 Identity = 49/128 (38.28%), Postives = 75/128 (58.59%), Query Frame = 0 Query: 3 VFDIRRRFREHGTTTRKSGQGRKRSVRTKAIIAAVQSRIKRNPVRTIRGIANSMGIAKTTIERVVKEDIGAKSRARRKKHLINQNTKAKRLARSKVLLN-FMKNGPPVILYLDEKLFRVARVSNSQTD 129 V+ +R+ E + +S GR RSVRT A+I AV++RI+RNP R + +A MG+++TT++RV+ ED+G ++ R+ H +N RL R + LL + IL+ DEK+F V N Q D Sbjct: 39 VYRTIKRYNEDSSVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKRKQKLLALQMGLSRTTVKRVLNEDLGLRAYRRKTGHRLNARLMDLRLKRCRALLKRYAGKKYREILFSDEKIFTVEESYNKQND 166
BLAST of transposase vs. nr
Match: gi|171196047|dbj|BAG15923.1| (transposase [Bombyx mandarina] >gi|171196052|dbj|BAG15924.1| transposase [Bombyx mandarina] >gi|171196057|dbj|BAG15925.1| transposase [Bombyx mandarina]) HSP 1 Score: 85.1149 bits (209), Expect = 4.358e-15 Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = 0 Query: 3 VFDIRRRFREHGTTTRKSGQGRKRSVRTKAIIAAVQSRIKRNPVRTIRGIANSMGIAKTTIERVVKEDIGAKSRARRKKHLINQNTKAKRLARSKVLLN-FMKNGPPVILYLDEKLFRVARVSNSQTD 129 V+ +R+ E + +S GR RSVRT A+I AV++RI+RNP R + +A MG+++TT+++V+ ED+G ++ R+ H +N RL R + LL + IL+ DEK F V N Q D Sbjct: 39 VYRTIKRYNEDSSVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKRKQKLLAPQMGLSRTTVKKVLNEDLGLRAYRRKTGHRLNARLMDLRLKRCRALLKRYAGKKNREILFSDEKFFTVEESYNKQND 166
BLAST of transposase vs. nr
Match: gi|171196073|dbj|BAG15927.1| (transposase [Bombyx mandarina]) HSP 1 Score: 84.7297 bits (208), Expect = 4.947e-15 Identity = 49/128 (38.28%), Postives = 75/128 (58.59%), Query Frame = 0 Query: 3 VFDIRRRFREHGTTTRKSGQGRKRSVRTKAIIAAVQSRIKRNPVRTIRGIANSMGIAKTTIERVVKEDIGAKSRARRKKHLINQNTKAKRLARSKVLLN-FMKNGPPVILYLDEKLFRVARVSNSQTD 129 V+ +R+ E + +S GR RSVRT A+I AV++RI+RNP R + +A MG+++TT++RV+ ED+G ++ R+ H +N RL R + LL + IL+ DEK+F V N Q D Sbjct: 39 VYRTIKRYNEDSSVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKRKQKLLALQMGLSRTTVKRVLNEDLGLRAYRRKTGHRLNARLMDLRLKRCRALLKRYAGKKYREILFSDEKIFIVEESYNKQND 166
BLAST of transposase vs. nr
Match: gi|222425220|dbj|BAH20555.1| (transposase [Bombyx mandarina]) HSP 1 Score: 84.7297 bits (208), Expect = 5.782e-15 Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = 0 Query: 3 VFDIRRRFREHGTTTRKSGQGRKRSVRTKAIIAAVQSRIKRNPVRTIRGIANSMGIAKTTIERVVKEDIGAKSRARRKKHLINQNTKAKRLARSKVLLN-FMKNGPPVILYLDEKLFRVARVSNSQTD 129 V+ +R+ E + +S GR RSVRT A+I AV++RI+RNP R + +A MG+++TT+++V+ ED+G ++ R+ H +N RL R + LL + IL+ DEK F V N Q D Sbjct: 39 VYRTIKRYNEDSSVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKRKQKLLAPQMGLSRTTVKKVLNEDLGFRAYRRKTGHRLNARLMDLRLKRCRALLKRYAGKKNREILFSDEKFFTVEESYNKQND 166
BLAST of transposase vs. nr
Match: gi|171196062|dbj|BAG15926.1| (transposase [Bombyx mandarina]) HSP 1 Score: 84.3445 bits (207), Expect = 7.897e-15 Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = 0 Query: 3 VFDIRRRFREHGTTTRKSGQGRKRSVRTKAIIAAVQSRIKRNPVRTIRGIANSMGIAKTTIERVVKEDIGAKSRARRKKHLINQNTKAKRLARSKVLLN-FMKNGPPVILYLDEKLFRVARVSNSQTD 129 V+ +R+ E + +S GR RSVRT A+I AV++RI+RNP R + +A MG+++TT+++V+ ED+G ++ R+ H +N RL R + LL + IL+ DEK F V N Q D Sbjct: 39 VYRTIKRYNEDSSVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKRKQKLLALQMGLSRTTVKKVLNEDLGLRAYRRKTGHRLNARLMDLRLKRCRALLKRYAGKKNREILFSDEKFFTVEESYNKQND 166
BLAST of transposase vs. nr
Match: gi|308453801|ref|XP_003089587.1| (hypothetical protein CRE_03542 [Caenorhabditis remanei] >gi|308239277|gb|EFO83229.1| hypothetical protein CRE_03542 [Caenorhabditis remanei]) HSP 1 Score: 82.4185 bits (202), Expect = 1.319e-14 Identity = 51/127 (40.16%), Postives = 75/127 (59.06%), Query Frame = 0 Query: 2 AVFDIRRRFREHGTTTRKSGQGRKRSVRTKAIIAAVQSRIKRNPVRTIRGIANSMGIAKTTIERVVKEDIGAKSRARRKKHLINQNTKAKRLARSKVLLNFMKNGPPVI-LYLDEKLFRVARVSNSQ 127 V+D RF++ GT + G+GRK +V T I AV RI+RNP R+IR +A M I+ ++ER+VK+ + RK ++++ T KRL RSK LL +NG ++ ++ DEKLF V N Q Sbjct: 34 TVYDSISRFKKLGTFLDRCGRGRKPTVVTPDRIKAVTERIRRNPHRSIRKMAKGMKISSRSMERIVKDKLKLTCYRVRKAAILSEATTKKRLERSKKLLQRTRNGEHLVTVFSDEKLFTVQAEFNPQ 160
BLAST of transposase vs. nr
Match: gi|828212548|ref|XP_012559027.1| (PREDICTED: uncharacterized protein LOC105845614 [Hydra vulgaris]) HSP 1 Score: 82.4185 bits (202), Expect = 1.840e-14 Identity = 45/119 (37.82%), Postives = 71/119 (59.66%), Query Frame = 0 Query: 12 EHGTTTRKSGQGRKRSVRTKAIIAAVQSRIKRNPVRTIRGIANSMGIAKTTIERVVKEDIGAKSRARRKKHLINQNTKAKRLARSKVLLNFMKNGPPV-ILYLDEKLFRVARVSNSQTD 129 E G ++ G R VRTK + ++ +++RNP R+I +A +++ T++RVV +D+G KS + K+ L+++ T+AKR RSK LLN+ K+ V I+Y DEK F V N D Sbjct: 50 ETGKNYKRKKTGPNRYVRTKELRNSIDCKVRRNPNRSISSLAREAVVSRRTMQRVVHDDLGMKSLVKSKRQLLSEATRAKRRKRSKELLNWFKDHKDVPIVYSDEKFFTVEPEPNRYND 168
BLAST of transposase vs. nr
Match: gi|1098434140|ref|WP_071212576.1| (hypothetical protein [Acinetobacter baumannii] >gi|1096602384|gb|OIE85369.1| hypothetical protein A7L79_18990 [Acinetobacter baumannii]) HSP 1 Score: 82.8037 bits (203), Expect = 2.494e-14 Identity = 48/128 (37.50%), Postives = 74/128 (57.81%), Query Frame = 0 Query: 3 VFDIRRRFREHGTTTRKSGQGRKRSVRTKAIIAAVQSRIKRNPVRTIRGIANSMGIAKTTIERVVKEDIGAKSRARRKKHLINQNTKAKRLARSKVLLN-FMKNGPPVILYLDEKLFRVARVSNSQTD 129 V+ +R+ E + +S GR RSVRT A+I AV++RI+RNP + +A MG+++TT++RV+ ED+G ++ R+ H +N RL R + LL + IL+ DEK+F V N Q D Sbjct: 57 VYRTIKRYNEDSSVDDRSRSGRPRSVRTPAVIKAVKARIQRNPKLKQKLLALQMGLSRTTVKRVLNEDLGLRAYRRKTGHRLNARLMDLRLKRCRALLKRYAGKKYREILFSDEKIFTVEESYNKQND 184 The following BLAST results are available for this feature:
BLAST of transposase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 3
BLAST of transposase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of transposase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold105_size367834:228665..237828+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold105_size367834-snap-gene-2.30 ID=maker-scaffold105_size367834-snap-gene-2.30|Name=transposase|organism=Tigriopus kingsejongensis|type=gene|length=9164bp|location=Sequence derived from alignment at scaffold105_size367834:228665..237828+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'transposase' has the following synonyms
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