39s ribosomal protein mitochondrial precursor, maker-scaffold119_size336447-snap-gene-2.35 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 39s ribosomal protein mitochondrial precursor vs. L. salmonis genes
Match: EMLSAG00000002981 (supercontig:LSalAtl2s:LSalAtl2s170:188446:188814:1 gene:EMLSAG00000002981 transcript:EMLSAT00000002981 description:"augustus_masked-LSalAtl2s170-processed-gene-2.1") HSP 1 Score: 56.9954 bits (136), Expect = 2.780e-11 Identity = 29/71 (40.85%), Postives = 44/71 (61.97%), Query Frame = 0 Query: 102 MCRKFGAKGWGQYKYPVMNRKLRLDHKTGEYFRLGLLPMGTYQKIRDETLAIQERMKESFGFQPKPVGLTV 172 M R+FG+K WG K MN ++++D+ TGE+F+LG L T++ I +ET IQ ++K FG K + V Sbjct: 1 MTRRFGSKQWGTCKLVPMNYRIQVDNNTGEFFQLGELAPRTFRYIMNETEIIQSKVKNIFGKGAKDADVLV 71
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|225711406|gb|ACO11549.1| (39S ribosomal protein L32, mitochondrial precursor [Caligus rogercresseyi]) HSP 1 Score: 86.2705 bits (212), Expect = 4.289e-18 Identity = 50/117 (42.74%), Postives = 69/117 (58.97%), Query Frame = 0 Query: 57 LNPACLGPNVDPVPSP-TRSAHTDPLTEGFGILNAVPKNRRNWTRRMCRKFGAKGWGQYKYPVMNRKLRLDHKTGEYFRLGLLPMGTYQKIRDETLAIQERMKESFGFQPKPVGLTV 172 L P LG V SP R D IL AVPK RR+ +RM R+FG+K WG K MN ++R+D+KTGE+F LG L T++ + DET +IQ+++K+ FG +PK + V Sbjct: 23 LRPELLG-----VASPLARQTPNDSSEISESILWAVPKKRRSLEKRMTRRFGSKHWGTSKLVPMNHRIRVDNKTGEFFVLGQLAPRTFRAVMDETQSIQKKVKDLFGKEPKNAEVGV 134
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1325314020|ref|XP_023338684.1| (39S ribosomal protein L32, mitochondrial-like [Eurytemora affinis]) HSP 1 Score: 85.8853 bits (211), Expect = 1.022e-17 Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 0 Query: 86 GILNAVPKNRRNWTRRMCRKFGAKGWGQYKYPVMNRKLRLDHKTGEYFRLGLLPMGTYQKIRDETLAIQERMKESFGF-QPKPVGLTVL 173 IL P+ RR +R R+FG+ WG YK P +N+K+R+DHKTGEYF LG L TY +I +ET AIQ++M+E+FG PK + VL Sbjct: 50 SILWNTPRRRRCLEKRQTRRFGSLEWGTYKLPRINQKIRVDHKTGEYFELGKLAPLTYTRIMEETKAIQKKMQETFGTGTPKDQDVVVL 138
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|225711300|gb|ACO11496.1| (39S ribosomal protein L32, mitochondrial precursor [Caligus rogercresseyi]) HSP 1 Score: 85.5001 bits (210), Expect = 1.182e-17 Identity = 50/117 (42.74%), Postives = 69/117 (58.97%), Query Frame = 0 Query: 57 LNPACLGPNVDPVPSP-TRSAHTDPLTEGFGILNAVPKNRRNWTRRMCRKFGAKGWGQYKYPVMNRKLRLDHKTGEYFRLGLLPMGTYQKIRDETLAIQERMKESFGFQPKPVGLTV 172 L P LG V SP R D IL AVPK RR+ +RM R+FG+K WG K MN ++R+D+KTGE+F LG L T++ + DET +IQ+++K+ FG +PK + V Sbjct: 23 LRPEFLG-----VASPLARQTPNDSSEISESILWAVPKKRRSLEKRMTRRFGSKHWGTSKLVPMNHRIRVDNKTGEFFVLGQLAPRTFRAVMDETQSIQKKVKDLFGKEPKNAEVGV 134
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|225709356|gb|ACO10524.1| (39S ribosomal protein L32, mitochondrial precursor [Caligus rogercresseyi]) HSP 1 Score: 84.3445 bits (207), Expect = 4.098e-17 Identity = 48/111 (43.24%), Postives = 66/111 (59.46%), Query Frame = 0 Query: 57 LNPACLGPNVDPVPSP-TRSAHTDPLTEGFGILNAVPKNRRNWTRRMCRKFGAKGWGQYKYPVMNRKLRLDHKTGEYFRLGLLPMGTYQKIRDETLAIQERMKESFGFQPK 166 L P LG V SP R D IL AVPK RR+ +RM R+FG+K WG K MN ++R+D+KTGE+F LG L T++ + DET +IQ+++K+ G +PK Sbjct: 23 LRPELLG-----VASPLARQTPNDSSEISESILWAVPKKRRSLEKRMTRRFGSKHWGTSKLVPMNHRIRVDNKTGEFFVLGQLAPRTFRAVMDETQSIQKKVKDLIGKEPK 128
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|290561443|gb|ADD38122.1| (39S ribosomal protein L32, mitochondrial [Lepeophtheirus salmonis]) HSP 1 Score: 70.8626 bits (172), Expect = 6.331e-12 Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = 0 Query: 49 VQRGRFPPLNP--ACLGPNVDPVPSPTRSAHTDPLTEGFGILNAVPKNRRNWTRRMCRKFGAKGWGQYKYPVMNRKLRLDHKTGEYFRLGLLPMGTYQKIRDETLAIQERMKESFG 162 + R FPP +P A P + PS S + IL VPK RR+ +RM R+FG+K WG K MN ++++D+ TGE+F+LG L T++ I +ET IQ ++K FG Sbjct: 17 LSRSFFPP-SPQFALSSPALRYTPS---SCQESSPSLKDSILWGVPKRRRSLEKRMTRRFGSKQWGTCKLVPMNYRIQVDNNTGEFFQLGELAPRTFRYIMNETEIIQSKVKNIFG 128
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|350405494|ref|XP_003487451.1| (39S ribosomal protein L32, mitochondrial [Bombus impatiens]) HSP 1 Score: 61.2326 bits (147), Expect = 2.824e-8 Identity = 49/145 (33.79%), Postives = 74/145 (51.03%), Query Frame = 0 Query: 34 YRSFSAIVDDVLWHMVQRGRFPPLN---PACLGPNVDPVPSPTRSAHTDPLTEGFGILNAVPKNRRNWTRRMCRKFGAKGWGQYKYP--VMNRKLRLDHKTGEYFRLGLLPMGTYQKIRDETLAIQERMKESFGFQPKPVGLTVL 173 +++F+ +VD +L +RG FP N C NV + P RS D L E IL AVPK RR+ +R+CR+F GW +Y + V + + K G + G L Y+ ++ ET IQ+ +++S G QP + VL Sbjct: 22 FKAFNQVVDIIL----RRG-FPSGNLYAIECNAVNVQTINFPGRSIK-DVLNET--ILWAVPKKRRSIEKRLCRRF---GWPEYVWKPHVPKTNILMCKKCGHDYEAGTLCGYCYEIVKKETKEIQKAIQDSLGLQPVEQDVIVL 155
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1080046036|ref|XP_018564249.1| (39S ribosomal protein L32, mitochondrial [Anoplophora glabripennis]) HSP 1 Score: 61.2326 bits (147), Expect = 2.860e-8 Identity = 45/123 (36.59%), Postives = 63/123 (51.22%), Query Frame = 0 Query: 53 RFPPLNPACLGPNVDPVPSPTRSAHTDPLTEGFGILNAVPKNRRNWTRRMCRKFGAKGWGQYKYPVMNRK--LRLDHKTGEYFRLGLLPMGTYQKIRDETLAIQERMKESFGFQPKPVGLTVL 173 R+PP G VD P P R + D L +GF L AVPK+RR+ +R+ RKFG Y +M K LR + G+ G+L Y+K+ DET A+QE ++E +P + VL Sbjct: 27 RYPPGAFCLAGTAVDRFPQPPRFSLKDVLGDGF--LWAVPKHRRSIEKRLKRKFGH---PDYVLKIMKPKTNLRTCNVCGDDHEAGVLCPTCYKKVMDETKAMQEAIQEELKLEPVEKEVVVL 144
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|907596280|ref|XP_013118644.1| (PREDICTED: 39S ribosomal protein L32, mitochondrial [Stomoxys calcitrans]) HSP 1 Score: 60.8474 bits (146), Expect = 3.318e-8 Identity = 47/152 (30.92%), Postives = 74/152 (48.68%), Query Frame = 0 Query: 26 IGRQITQCYRSFSAIVDDVLWHMVQRGRFPPLNPACLGPNVDP----VPSPTRSAHTDPLTEGFGILNAVPKNRRNWTRRMCRKFGAKGWGQYKYPVMNRKLRLDHKTGEYFRLGLLPMGTYQKIRDETLAIQERMKESFGFQPKPVGLTVL 173 + R + + +F ++ VL + Q+G PP P+V +PTRS G GIL AVPK+RR +R+ RKFG + +K + LR ++ G + G L Y K+R+ET +Q++++E G QP + VL Sbjct: 1 MSRNLVLYFSNFLQRLESVLPALFQQGSLPPAFALAGLPSVHEKIRNQNTPTRSLKD---IIGDGILWAVPKHRRTLEKRLNRKFGYPEYN-WKPLRVKTNLRSCNQCGHDYEAGHLCPHCYNKVREETQQMQDKIQEELGLQPVEQEVVVL 148
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|1098672910|ref|XP_018797284.1| (PREDICTED: 39S ribosomal protein L32, mitochondrial [Bactrocera latifrons]) HSP 1 Score: 59.3066 bits (142), Expect = 1.438e-7 Identity = 50/150 (33.33%), Postives = 80/150 (53.33%), Query Frame = 0 Query: 26 IGRQITQCYRSFSAIVDDVLWHMVQRGRFPPLNPACLG-PNVDPVPSPTRSAHTDPLTE-GFGILNAVPKNRRNWTRRMCRKFGAKGWGQYKYPVMNRKLRLDHKTGEYFRLGLLPMGTYQKIRDETLAIQERMKESFGFQPKPVGLTVL 173 + R I Q SF ++ ++ +RG+ PPL A +G P+V+ + +P +S G GIL AVPK+RR +R+ RKFG G+ +K V LR ++ G LG+L Y+K+ ET +QE++++ G +P + VL Sbjct: 1 MSRTIYQSLNSFLNRLERFIF-FGRRGQ-PPLELALVGMPSVE-LNAPNKSDRFSLKNLLGDGILWAVPKHRRTIEKRLNRKFGLPGYN-WKPLVAKTNLRSCNQCGHDHELGVLCPHCYKKVEQETRLMQEKIQQKLGLEPIEHEVVVL 146
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Match: gi|751788229|ref|XP_011203565.1| (PREDICTED: 39S ribosomal protein L32, mitochondrial [Bactrocera dorsalis]) HSP 1 Score: 58.5362 bits (140), Expect = 2.319e-7 Identity = 48/149 (32.21%), Postives = 75/149 (50.34%), Query Frame = 0 Query: 26 IGRQITQCYRSFSAIVDDVLWHMVQRGRFPPLNPACLGPNVDPVPSPTRSAHTDPLTE-GFGILNAVPKNRRNWTRRMCRKFGAKGWGQYKYPVMNRKLRLDHKTGEYFRLGLLPMGTYQKIRDETLAIQERMKESFGFQPKPVGLTVL 173 + R I Q SF ++ ++ RG+ PPL A +G + +P +S G GIL AVPK+RR +R+ RKFG G+ +K V LR ++ G LG+L Y+K+ ET +QE++++ G +P + VL Sbjct: 1 MSRNIYQSLNSFLNRLERFIF-FGHRGQ-PPLELALVGMPSVGLNAPNKSDRFSLKNLLGDGILWAVPKHRRTIEKRLNRKFGLPGYN-WKPLVAKTNLRSCNQCGHDHELGVLCPHCYKKVEQETRLMQEKIEQKLGLEPIEHEVVVL 146 The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial precursor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 39s ribosomal protein mitochondrial precursor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of 39s ribosomal protein mitochondrial precursor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold119_size336447:271253..271923- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold119_size336447-snap-gene-2.35 ID=maker-scaffold119_size336447-snap-gene-2.35|Name=39s ribosomal protein mitochondrial precursor|organism=Tigriopus kingsejongensis|type=gene|length=671bp|location=Sequence derived from alignment at scaffold119_size336447:271253..271923- (Tigriopus kingsejongensis)back to top Synonyms
The feature '39s ribosomal protein mitochondrial precursor' has the following synonyms
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