atpase aaa, maker-scaffold1209_size55568-snap-gene-0.10 (gene) Tigriopus kingsejongensis

Overview
Nameatpase aaa
Unique Namemaker-scaffold1209_size55568-snap-gene-0.10
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of atpase aaa vs. L. salmonis genes
Match: EMLSAG00000003377 (supercontig:LSalAtl2s:LSalAtl2s1854:10624:14619:-1 gene:EMLSAG00000003377 transcript:EMLSAT00000003377 description:"augustus_masked-LSalAtl2s1854-processed-gene-0.2")

HSP 1 Score: 50.0618 bits (118), Expect = 3.018e-7
Identity = 56/166 (33.73%), Postives = 76/166 (45.78%), Query Frame = 0 
Query:   60 PEASLRRSGHQPRHMRSL----IREWNDSVARVRRDAERERRRRVSRDPDILRRRRRYGRHLGDPDLSASLLALDRSSPLSRPEHGSVPPEGPAPTSFNTVSPLREQIWRRLRRRNAQLNQLDSQI-------------LAETGSRERSRHREMLSWMVDQLSIDQ 208
            P     R  +  R+MR L    +RE  DS A  RRD ER R+R +SR   I  +RR   R +G+   S+S  A ++SSP                        +   + R L RRN QLN L+ +I               +   ++R  HRE+LSWMVDQL+IDQ
Sbjct:  835 PSPGFNRRLNSVRNMRDLGRASMRERLDSRAEYRRDWERARQR-LSRARMIFHQRRE--REMGE---SSSGGASNQSSP-----------------------QVDNWVLRYLLRRNMQLNALEDEIGELNVDQQRQPLRQLQQSQQQRPLHREILSWMVDQLTIDQ 971
The following BLAST results are available for this feature:
BLAST of atpase aaa vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000033773.018e-733.73supercontig:LSalAtl2s:LSalAtl2s1854:10624:14619:-1... [more]
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BLAST of atpase aaa vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of atpase aaa vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold1209_size55568supercontigscaffold1209_size55568:51987..54469 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold1209_size55568-snap-gene-0.10-mRNA-1maker-scaffold1209_size55568-snap-gene-0.10-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold1209_size55568:51987..54469+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold1209_size55568-snap-gene-0.10 ID=maker-scaffold1209_size55568-snap-gene-0.10|Name=atpase aaa|organism=Tigriopus kingsejongensis|type=gene|length=2483bp|location=Sequence derived from alignment at scaffold1209_size55568:51987..54469+ (Tigriopus kingsejongensis)
CCCGAAGAGCCCTACCCGGACCTCCCGCCCGCCATTCCCCGCCCCTCGGC
CCGGCTCAGCTACCGTCAGAGGGTGCGCCATCTCTTGGAGGGGACGACCG
AGTACGACACCATTGTGGACGAGACCCAGTCGCCTGCTGCGGATCCCTTT
GCCTCCACCTCCGACTCGGACGGCAACGAGGGCGAGGAGGAGCCCTTCGA
GGAGCCGGGCTTCACCCGCCACAACGGACTCGGAGCCGGTCGGCGACTCC
ATCCCCCGCCCCCCGAGGCCTCACTCCGACGCAGTGGACACCAGCCCCGG
CACATGCGCTCACTGATCCGCGAGTGGAACGACAGTGTGGCTCGAGTGCG
CCGAGACGCCGAGCGAGAACGCCGGAGAAGAGTGTCCCGAGATCCGGACA
TCCTACGCCGACGGAGGCGATATGGCAGGTGAGAATCCCAGTGGGCCAGT
GGTATCGGCCTGGGCGTGCATGGACATGCGTGCATACTCGGAGGGGGTTG
GCCAGAGCTGCCGCTTCCTTCTAGCCAGGTGTCAAATGCAACTGGCCATA
TTTCGGATTACACCCCACGAAAGAGCGATGCGAGGCTGGGAACAACCACA
CTCGAACACGCTCAAACTGAGCCAGGATTGGGGTTATTTTTGTTTTCCTT
GTGCCTCATTGGGCATGGAGTTCGACTGTAGAATCACCTGGAGGTCGCAC
GGAACGAAACATGTGTCCCAAGACGGCCTCTCGTTCAGGTAGTTCGAAAG
CCGTTAATATAATTCGATCGACGGACTGGAGGTGTGTGCATGACATTTCT
ACCAATTCTTTAGGGTTTCAGAGTGACTCATTGCTGGACTCGTAAACCCT
ACAGAACTGGTAGAAATGTCATGCACACCTCCAGTCCGTCGATCGAATTA
TATTAACGGCTTTCGAACTACCTGAACGAGAGGCCGTCTTGGGACACACG
TTTCGTTCCGTGCGACCTCCAGGTGATTCTAGTACTCCATGCATTGTGGC
AGGTGAATCTCGGGGGTTAGACAGTTATATGCTCTGGGTGCTCGCTATTT
TTTGATGTGCGGCTGCCCACATGTCTCGTTCTAGATCTTCTTACTTTTGT
CATGTCCAACACATATGAATATTGTGAAGAAACGGCTCAATATCTTGATG
CCAACAATCCGAGGAAAGCTATTGGATACAAAAATTAGCCCATCTGGTCT
GTTGAAGGGTTAATTTCTAATGGATTATGATTGACGGGATGCGTTTTGAG
ACTTGGGGTATATAAAGACTCCCGACAGAATCACCCCAAACACTTGTTTG
GGAGATATTCTCGAGCACGTAGCACCTTATTGAAACCATTGTCCAAGTGA
AACGAGCTCAGTGATATTACTGCAATCGAAAAACCATGAAAGATGTTCAA
CATCTCGCCCAAGCGGTTGGTAGGTATTCTCAACCTCGAATCTTCAAAAA
AACATACAATGCCTAGGCTCAGCTCTATTGCTCCGAGGACAAATTCCAAA
ATGAGAGAAAGCTTCCAAGAGAAATCCAACCATTTTAGGACTCGCCATGA
AAGATTGAAGAGTCGATGGTTAAATGATAATGGAGCATTTCAATGTAGAA
ACAATGCAACGGAATTGTTTAAAGCTTTGGCCGAAGCTGAGCCAGCATAT
CCTCGAAGTAATCATATTGCCTTCTCAGTGTATTAATTAACTCGTCGACA
GGCGCCGTGGCAAATGCCATAGGATAGTCAAAGCTCGGTTTCATTGGGGC
CCTCTGAAGGAGAAAACCCCCCCAAAACACTCGGTATAGAATATTCAGTT
GCCCTAGGATGCGAGGAGATGCCCCAATGCTAAGTTTAAAAAAAATCCCA
CAGCAAGCGGTAGAGACACATCAAAAAATAATCAAGCAACTTTGCACTCA
TTGGGCTGAAATCAAATGGCTAGGAGAGCTTGTGCTCTGTCCGAAAGTGA
GTCTCCTGATTCGAATTTTGCGCACATTGTGGTGAAGGTAGTCCCAACCA
TACCAAAGGCAATGCCTCGCCGGATCTCAAATCCCAGATCACCCGTTTCA
TTGTGACCGATGCACTTTCAGACACTTGGGAGATCCGGATCTGTCGGCCA
GTCTGCTGGCCTTGGATCGCAGCAGCCCTCTGTCCCGCCCGGAGCATGGA
TCCGTCCCACCCGAGGGACCAGCGCCCACCAGTTTCAACACTGTGTCGCC
CTTGAGGGAGCAGATTTGGCGTCGTCTGCGTCGCCGCAATGCCCAACTCA
ACCAATTGGACTCGCAGATCCTGGCCGAAACTGGAAGTCGAGAGCGCTCC
AGACATCGAGAGATGCTCTCTTGGATGGTGGACCAGCTCTCCATTGACCA
GCCTCAACTCGTCCATATGGTCCCGGAGGGTGAGGTGCGCTCCAGCGCCA
ATGAGGCCATTCCCACGGCCAACAACGACAGCCTCAGTCTAGCCATGTCC
TCGAGTGGACACAATCCGGACCCGACCTCCGCC
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Synonyms
The feature 'atpase aaa' has the following synonyms
Synonym
Tk03739
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