mrna export factor, maker-scaffold125_size330479-snap-gene-0.15 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of mrna export factor vs. L. salmonis genes
Match: EMLSAG00000009137 (supercontig:LSalAtl2s:LSalAtl2s575:53505:62115:1 gene:EMLSAG00000009137 transcript:EMLSAT00000009137 description:"maker-LSalAtl2s575-augustus-gene-0.8") HSP 1 Score: 586.26 bits (1510), Expect = 0.000e+0 Identity = 274/343 (79.88%), Postives = 300/343 (87.46%), Query Frame = 0 Query: 34 TSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQP-KEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 ++ NP KD+EV + PDDSVS L FSPPSL FLIAGSWDNNVRCWEI G GQS GPILDVCWHDDG+KVFMASCDKQVKCWDL SNQT++VA+H APVK VRW KAPNY ALMTGSWDKTLKFWDTRSPNPIMSI+L ER YCAD+++PMAVVG +GRGI+IY L+GQ KE KR+EPPLKYQHRC+S+FKDKK QPTGFALGSVEGRVAIQYAN+TNPK+NFTFKCHRSNG NGFQDIYAVNDIAFHP HGTLATVGSDGR+SFWDKDARTKLKTSE MDQPIT C F++NG IFAYS SYDWS+GHEF+ PQKKN+IYLRSCFDELKPR K Sbjct: 315 STPNPMKDVEVVNPPDDSVSSLCFSPPSLQQNFLIAGSWDNNVRCWEISGTGQS---------GPILDVCWHDDGSKVFMASCDKQVKCWDLGSNQTIQVAQHDAPVKCVRWFKAPNYAALMTGSWDKTLKFWDTRSPNPIMSINLNERVYCADVDFPMAVVGLSGRGIVIYSLDGQTIKEXKRVEPPLKYQHRCVSIFKDKKVQPTGFALGSVEGRVAIQYANSTNPKENFTFKCHRSNGATNGFQDIYAVNDIAFHPIHGTLATVGSDGRYSFWDKDARTKLKTSEPMDQPITKCCFTANGQIFAYSVSYDWSKGHEFYYPQKKNFIYLRSCFDELKPRTK 648
BLAST of mrna export factor vs. L. salmonis genes
Match: EMLSAG00000000823 (supercontig:LSalAtl2s:LSalAtl2s1136:99948:102171:1 gene:EMLSAG00000000823 transcript:EMLSAT00000000823 description:"maker-LSalAtl2s1136-augustus-gene-1.53") HSP 1 Score: 187.963 bits (476), Expect = 8.311e-57 Identity = 112/337 (33.23%), Postives = 177/337 (52.52%), Query Frame = 0 Query: 41 DIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIM-SIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATN--PKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFD-ELKPR 373 + ++ +APDD ++ F P S FL+ SWD +VR +++ + + + S P+LD C D +V+ D +K +D+ S + H VK VR+ + N L++GSWD T+KFWD R+ NP++ + ER Y L V+ T GR + ++ + ++ E LKYQ R + F +K +G+ L S+EGRVA++Y + + K + FKCHRS NG + IY VN IAFH ++ T AT GSDG + WD + +L I + +FS++G + A ++SY + G P + + IY+R D E KP+ Sbjct: 19 EYKIKNAPDDGITKAEFGPNSA--QFLLVSSWDKSVRLYDVIND---TLRVKYSHSAPVLD-CTFQDPIRVWSGGLDGSLKTFDINSGTETLIGSHEKAVKCVRYSEEIN--GLISGSWDSTIKFWDPRNSNPLIGTYPQPERVYALSLAGEKLVIATLGRKVWVWDIRNMSYVQQKRESSLKYQTRALGCFPNK----SGYVLSSIEGRVAVEYLDPSTDIQKKKYAFKCHRSK--ENGIEVIYPVNTIAFHKEYNTFATGGSDGLVNIWDGHNKKRLCQFHKYPTSIASLTFSNDGRVLAIASSYMYEEGKPLDTPIEDS-IYIRHVSDQETKPK 340
BLAST of mrna export factor vs. L. salmonis genes
Match: EMLSAG00000001111 (supercontig:LSalAtl2s:LSalAtl2s1186:117586:119588:-1 gene:EMLSAG00000001111 transcript:EMLSAT00000001111 description:"maker-LSalAtl2s1186-snap-gene-1.40") HSP 1 Score: 53.1434 bits (126), Expect = 5.269e-8 Identity = 36/118 (30.51%), Postives = 64/118 (54.24%), Query Frame = 0 Query: 52 VSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMK--VAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWD 167 V C +F+P S +++GS+D +VR W+++ G+ KT + P+ V ++ DG+ + +S D + WD AS Q +K + PV V++ +PN ++ + D TLK W+ Sbjct: 117 VFCCNFNPQS---NLVVSGSFDESVRIWDVR-TGKC-LKTLPAHSDPVSAVHFNRDGSLIVSSSYDGXCRIWDTASGQCLKTLIDNDNPPVSFVKF--SPNGKYILAATLDNTLKLWE 227
BLAST of mrna export factor vs. L. salmonis genes
Match: EMLSAG00000012753 (supercontig:LSalAtl2s:LSalAtl2s968:242539:244062:-1 gene:EMLSAG00000012753 transcript:EMLSAT00000012753 description:"maker-LSalAtl2s968-augustus-gene-1.38") HSP 1 Score: 53.1434 bits (126), Expect = 6.287e-8 Identity = 43/166 (25.90%), Postives = 75/166 (45.18%), Query Frame = 0 Query: 41 DIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCY---CADLEYPMAVVGTAGRGII 203 DI+V++ D +SF P N + S D ++ +E + + K + I + +++DGT+++ AS DK K D+++ QT A S+ +K+ + TG D +K WD R +MS E C D + + VV ++G G + Sbjct: 114 DIKVSTETSD----ISFHPE---NNVIAVASMDGSISIFEYENEKNNLLKKLCLHKKNIRSMEFNEDGTEIYSASKDKSYKIIDVSTYQTKLTVPKAHGDSSLFKIKSISEHLYATGDEDGLVKLWDHRQKKDVMSEKKFEEFVTDICFDDDKKLMVV-SSGEGTL 271
BLAST of mrna export factor vs. L. salmonis genes
Match: EMLSAG00000009796 (supercontig:LSalAtl2s:LSalAtl2s638:23384:28063:-1 gene:EMLSAG00000009796 transcript:EMLSAT00000009796 description:"maker-LSalAtl2s638-augustus-gene-1.14") HSP 1 Score: 50.8322 bits (120), Expect = 3.113e-7 Identity = 30/114 (26.32%), Postives = 60/114 (52.63%), Query Frame = 0 Query: 66 FLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMK-VAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSID 178 +I+GS+D V+ W ++ S +T + +GP+L C H G + S DK +K W + + + ++ + H V + + ++TGS D+T+K WD+++ + ++D Sbjct: 290 LVISGSYDQTVKIWCLKTG--SCKRTLRGHEGPVL--CVHWAGFTLLSGSADKTIKQWSVETGECIRTLTGHGDAVTCI----SLETDRIVTGSLDRTIKLWDSKTGKCVSTLD 395
BLAST of mrna export factor vs. SwissProt
Match: gi|166218821|sp|Q7ZWF0.2|RAE1L_DANRE (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 556.214 bits (1432), Expect = 0.000e+0 Identity = 252/368 (68.48%), Postives = 304/368 (82.61%), Query Frame = 0 Query: 10 IAMFGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVNNGF-QDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 +++FGT++ FG G FG S NP KD+EV S PDDS+SCL+FSPP++P FLI GSW N+VRCWE+Q NGQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL SNQ +++A+H P++++ W+KAPNY+ +MTGSWDKTLKFWDTRSPNP+MS+ + ERCYCAD+ YPMAVV TA RG+I+YQLE QP EF+RIE PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN I+FHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQPITAC F+ NG+IFAY++SYDWS+GHE++NPQKKNYI+LR+ +ELKPR K Sbjct: 1 MSLFGTNTGFGSGGT-GVFGSTTTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGGSWANDVRCWEVQDNGQTVPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHEGPIRTIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQSKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTATPQDIYAVNAISFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPITACCFNHNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|3122666|sp|P78406.1|RAE1L_HUMAN (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41 >gi|75070984|sp|Q5RF99.1|RAEL1_PONAB RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 555.829 bits (1431), Expect = 0.000e+0 Identity = 256/368 (69.57%), Postives = 305/368 (82.88%), Query Frame = 0 Query: 10 IAMFGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVNNGF-QDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 +++FGT+S FG + FG + NP KDIEV S+PDDS+ CLSFSPP+LP FLIAGSW N+VRCWE+Q +GQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL+SNQ +++A+H APVK++ W+KAPNY+ +MTGSWDKTLKFWDTRS NP+M + L ERCYCAD+ YPMAVV TA RG+I+YQLE QP EF+RIE PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN IAFHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQPI+AC F+ NG+IFAY++SYDWS+GHEF+NPQKKNYI+LR+ +ELKPR K Sbjct: 1 MSLFGTTSGFGTSGT-SMFGSATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|75076335|sp|Q4R6D2.1|RAE1L_MACFA (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 554.288 bits (1427), Expect = 0.000e+0 Identity = 256/368 (69.57%), Postives = 305/368 (82.88%), Query Frame = 0 Query: 10 IAMFGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVNNGF-QDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 +++FGT+S FG + FG + NP KDIEV S+PDDS+ CLSFSPP+LP FLIAGSW N+VRCWE+Q +GQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL+SNQ +++A+H APVK++ W+KAPNY+ +MTGSWDKTLKFWDTRS NP+M + L ER YCAD+ YPMAVV TAGRG+I+YQLE QP EF+RIE PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN IAFHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQPI+AC F+ NG+IFAY++SYDWS+GHEF+NPQKKNYI+LR+ +ELKPR K Sbjct: 1 MSLFGTTSGFGTSGT-SMFGSATTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERYYCADVIYPMAVVATAGRGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|166218412|sp|A5GFN6.1|RAEL1_PIG (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 553.518 bits (1425), Expect = 0.000e+0 Identity = 256/368 (69.57%), Postives = 304/368 (82.61%), Query Frame = 0 Query: 10 IAMFGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVNNGF-QDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 +++FGT+S FG + FG + NP KDIEV S+PDDS+ CLSFSPP+LP FLIAGSW N+VRCWE+Q +GQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL SNQ +++A+H APVK++ W+KAPNY+ +MTGSWDKTLKFWDTRS NP+M + L ERCYCAD+ YPMAVV TA RG+I+YQLE QP EF+RIE PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN IAFHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQPI+AC F+ NG+IFAY++SYDWS+GHEF+NPQKKNYI+LR+ +ELKPR K Sbjct: 1 MSLFGTTSGFGTSGT-SMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|82231254|sp|Q5FVA9.1|RAE1L_XENTR (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 550.436 bits (1417), Expect = 0.000e+0 Identity = 251/341 (73.61%), Postives = 294/341 (86.22%), Query Frame = 0 Query: 37 NPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVN-NGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 NP KDIEV S PDDS+SCLSFSPP+LP FLIAGSW N+VRCWE+Q NGQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL SNQ++++A+H AP+K+V WVKAPNY+ +MTGSWDK+LKFWDTRSPNP++++ L ERCYCAD+ YPMAVV TA RG+I+YQLE QP EF+RI+ PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN IAFHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQPI+ACSF+ NG+IFAYS+SYDWS+GHEF+NPQKKNYI+LR+ +ELKPR K Sbjct: 27 NPMKDIEVTSPPDDSISCLSFSPPTLPGNFLIAGSWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQSIQIAQHDAPIKTVHWVKAPNYSCIMTGSWDKSLKFWDTRSPNPLLTLQLPERCYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTTAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACSFNHNGNIFAYSSSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|75070022|sp|Q5E9A4.1|RAE1L_BOVIN (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 545.043 bits (1403), Expect = 0.000e+0 Identity = 251/350 (71.71%), Postives = 293/350 (83.71%), Query Frame = 0 Query: 28 FGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVNNGF-QDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 FG + NP KDIEV S+PDDS+ CLSFSPP+LP FLIAGSW N+VRCWE+Q +GQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL SNQ +++A+H APVK+V W+KAPNY+ +MTGSWDKTLKFWDTRS NP+M + L ERCYCAD+ YPMAVV TA RG+I+YQLE QP EF+RIE PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN IAFHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQPI+AC F+ NG+IFAY++SYDWS+GHEF+NPQKKNYI+LR+ +ELKPR K Sbjct: 18 FGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|114154818|sp|Q3SWS8.1|RAE1L_RAT (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0 Identity = 249/350 (71.14%), Postives = 292/350 (83.43%), Query Frame = 0 Query: 28 FGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVNNGF-QDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 FG + NP KDIEV S+PDDS+ CLSFSPP+LP FLIAGSW N+VRCWE+Q +GQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL SNQ +++A+H APVK++ W+KAPNY+ +MTGSWDKTLKFWDTRS NP+M + L ERCYCAD+ YPMAVV TA RG+I+YQLE QP EF+RIE PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN IAFHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQP+ AC F+ NG+IFAY++SYDWS+GHEF+NPQKKNYI+LR+ +ELKPR K Sbjct: 18 FGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPVAACGFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|81914027|sp|Q8C570.1|RAE1L_MOUSE (RecName: Full=mRNA export factor; AltName: Full=Rae1 protein homolog; AltName: Full=mRNA-associated protein mrnp 41) HSP 1 Score: 543.888 bits (1400), Expect = 0.000e+0 Identity = 250/350 (71.43%), Postives = 292/350 (83.43%), Query Frame = 0 Query: 28 FGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNP-KDNFTFKCHRSNGVNNGF-QDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 FG + NP KDIEV S+PDDS+ CLSFSPP+LP FLIAGSW N+VRCWE+Q +GQ+ PK QQ GP+LDVCW DDG+KVF ASCDK K WDL SNQ +++A+H APVK++ W+KAPNY+ +MTGSWDKTLKFWDTRS NP+M + L ERCYCAD+ YPMAVV TA RG+I+YQLE QP EF+RIE PLK+QHRC+++FKDK+ +PTGFALGS+EGRVAI Y N NP KDNFTFKCHRSNG N QDIYAVN IAFHP HGTLATVGSDGRFSFWDKDARTKLKTSE +DQPI AC F+ NG+IFAY++SYDWS+GHEF+NPQKKNYI+LR+ +ELKPR K Sbjct: 18 FGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPIAACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNK 367
BLAST of mrna export factor vs. SwissProt
Match: gi|3123163|sp|Q93454.1|RAE1_CAEEL (RecName: Full=mRNA export factor rae-1; AltName: Full=Nuclear pore complex protein 17; AltName: Full=Nucleoporin-17) HSP 1 Score: 384.03 bits (985), Expect = 2.196e-131 Identity = 190/365 (52.05%), Postives = 233/365 (63.84%), Query Frame = 0 Query: 13 FGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRS-PNP--IMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQ-PTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPR 373 FG S FGG N +T N D V+ AP+D++ + FSP L GSWD +R W E K QQ++ PILD+ W +D +K+F+A DK+ + WDLASNQ V H PVK+ W+ NY LMTGS+DKTL+FWD ++ PN + I L ER Y AD+ YPMAVV A + I +Y LE P E K IE LK+Q RCIS+FKDK Q P GFALGS+EGRVA+QY + NPKDNFTFKCHRS + NGFQ+IYAVNDI FHPQHGTL T+GSDGR+S WDKDARTKLKTSE P+T C S+G Y+ YDWSRGHE N Q + I + C +++KPR Sbjct: 7 FGNKSMFGGSNISTSTTTPAANTTQ-NDDFLVDGAPEDTIQVIKFSPTPQDKPMLACGSWDGTIRVWMFNDANTFEGKAQQNIPAPILDIAWIEDSSKIFIACADKEARLWDLASNQVAVVGTHDGPVKTCHWINGNNYQCLMTGSFDKTLRFWDMKNLPNQTQMAQIQLPERVYAADVLYPMAVVALANKHIKVYNLENGPTEVKDIESQLKFQIRCISIFKDKSNQNPAGFALGSIEGRVAVQYVDVANPKDNFTFKCHRSAELVNGFQEIYAVNDICFHPQHGTLVTIGSDGRYSMWDKDARTKLKTSEPHPMPLTCCDVHSSGAFLVYALGYDWSRGHE-GNTQPGSKIVIHKCIEDMKPR 369
BLAST of mrna export factor vs. SwissProt
Match: gi|83305440|sp|Q38942.2|RAE1_ARATH (RecName: Full=Protein RAE1; AltName: Full=RNA export factor 1) HSP 1 Score: 325.094 bits (832), Expect = 1.452e-108 Identity = 165/355 (46.48%), Postives = 216/355 (60.85%), Query Frame = 0 Query: 26 AGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQS---EPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASN-QTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAKP 376 A FG ++NPNK EV +P DS+S LSFSP + L+A SWDN VRCWEI +G S PK S P+L W DDGT VF CDKQ K W L S Q + VA H P+ ++ W+ P L TGSWDKTLK+WDTR NP+ + L ++CY +++P+ VVGTA R +I++ L+ EFKRI+ PLKYQ RC++ F D++ GF +GS+EGRV + + + + NFTFKCHR DIY+VN + FHP HGT AT GSDG F+FWDKD++ +LK +QPI SF+ +G I+AY+A YDWS+G E HNP E + +AKP Sbjct: 2 ATFGAPATANSNPNKSYEVTPSPADSISSLSFSPRA---DILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWI--PGMNLLATGSWDKTLKYWDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKYQTRCVTAFPDQQ----GFLVGSIEGRVGVHHLDDSQQSKNFTFKCHRDG------NDIYSVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHDGSIYAYAACYDWSKGAENHNPATAKSSIFLHLPQESEVKAKP 341
BLAST of mrna export factor vs. nr
Match: gi|817182841|ref|XP_012273191.1| (mRNA export factor [Orussus abietinus] >gi|817182843|ref|XP_012273200.1| mRNA export factor [Orussus abietinus]) HSP 1 Score: 569.696 bits (1467), Expect = 0.000e+0 Identity = 259/352 (73.58%), Postives = 299/352 (84.94%), Query Frame = 0 Query: 23 NQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRA 374 NQ A G G + NP KD EV S PDDSVS L+FSP S+P FL+AGSWD NVRCWE++ G++ PK+ SM GPILDVCWHDDGTKVFMASCDK VKCWDLASNQ+++VA+H APVK+ WVK NY+ LMTGSWDKTLKFWDTRSPNP+M+I+L ERCYCAD++YPMAVVGTA RG+I+YQLEG P+E+KR++ PLK+QHRCI++F+DKK PTG+ALGSVEGRVAIQY N NPKDNFTFKCHRSNG NG+QDIYAVNDIAFHP HGTLATVGSDG FSFWDKDARTKLK SE M+Q IT C F+ NG IFAYS SYDWS+GHE++NP KKNYI+LRSC+DELK R+ Sbjct: 3 NQSAALGTGTTNTANPMKDFEVVSPPDDSVSSLAFSPASIPQNFLVAGSWDCNVRCWEVEQTGKTVPKSMNSMAGPILDVCWHDDGTKVFMASCDKMVKCWDLASNQSVQVAQHDAPVKTCHWVKGTNYSCLMTGSWDKTLKFWDTRSPNPMMTINLPERCYCADVDYPMAVVGTASRGLIVYQLEGTPQEYKRMDSPLKHQHRCIAIFRDKKKGPTGYALGSVEGRVAIQYVNPGNPKDNFTFKCHRSNGAPNGYQDIYAVNDIAFHPVHGTLATVGSDGTFSFWDKDARTKLKPSEPMEQSITRCCFNRNGQIFAYSVSYDWSKGHEYNNPLKKNYIFLRSCYDELKSRS 354
BLAST of mrna export factor vs. nr
Match: gi|1227100343|gb|OXU24029.1| (hypothetical protein TSAR_010028 [Trichomalopsis sarcophagae]) HSP 1 Score: 569.311 bits (1466), Expect = 0.000e+0 Identity = 257/339 (75.81%), Postives = 295/339 (87.02%), Query Frame = 0 Query: 36 TNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRA 374 +NP KD EV S PDDS+S L+FSP ++P FL+AGSWD NVRCWE++ G++ PK+ QSM GPILDVCW DDGTKVFMASCDK VKCWDLASNQT++VA H APVK+ WVK NYT LMTGSWDKTLKFWDTR+PNP+++I+L ERCYCAD++YPMAVVGTAGRG+I+YQLEG P E+KRIE PLKYQHRC+++F+DKK PTG+ALGSVEGRVAIQY N TNPKDNFTFKCHRSNG NG+QDIYAVNDIAFHP HGTLATVGSDG FSFWDKDARTKLK SE M+ PIT C F+ NG IFAYS SYDWS+G+EF+NP KKNYI+LRSC+DELKPR+ Sbjct: 16 SNPMKDFEVVSPPDDSISSLAFSPATIPQNFLVAGSWDCNVRCWEVEQTGKTVPKSMQSMTGPILDVCWSDDGTKVFMASCDKMVKCWDLASNQTIQVAAHDAPVKTCHWVKGSNYTCLMTGSWDKTLKFWDTRTPNPMLTINLPERCYCADVDYPMAVVGTAGRGLIVYQLEGTPHEYKRIESPLKYQHRCVAIFRDKKKVPTGYALGSVEGRVAIQYVNPTNPKDNFTFKCHRSNGAPNGYQDIYAVNDIAFHPVHGTLATVGSDGTFSFWDKDARTKLKPSEPMEHPITRCCFNHNGQIFAYSVSYDWSKGYEFYNPMKKNYIFLRSCYDELKPRS 354
BLAST of mrna export factor vs. nr
Match: gi|755987449|ref|XP_011311524.1| (PREDICTED: mRNA export factor [Fopius arisanus]) HSP 1 Score: 568.926 bits (1465), Expect = 0.000e+0 Identity = 256/352 (72.73%), Postives = 300/352 (85.23%), Query Frame = 0 Query: 23 NQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRA 374 NQ + G P+++NP KD EV S P+DS S L+FSP S+P FL+AGSWD NVRCWE++ +G++ PK+ Q+M GP+LDVCWHDDGTKVFMAS DK VKCWDLASNQ+++VA H APVK+ WVK NY+ LMTGSWDKTLKFWD RSPNP+++I+L ERCYCAD++YPMAVVGTA RG+IIYQL+G P EFKR+E PLKYQHRC+++F+DKK P G+ALGSVEGRVAIQY N TNPKDNFTFKCHRSNG NG+QDIYAVNDIAFHP HGTLATVGSDG FSFWDKDARTKLK SE M+QPIT C F+ NG IFAY+ SYDWS+GHEF+NP KKNYI+LRSC+DELKPR+ Sbjct: 3 NQTSTLGAVAPSNSNPMKDFEVVSPPEDSTSSLAFSPASIPQNFLVAGSWDCNVRCWEVEQSGKTVPKSMQTMGGPVLDVCWHDDGTKVFMASVDKMVKCWDLASNQSIQVAAHEAPVKTCHWVKGSNYSCLMTGSWDKTLKFWDARSPNPMLTINLPERCYCADVDYPMAVVGTASRGLIIYQLDGTPHEFKRVESPLKYQHRCVAIFRDKKKVPNGYALGSVEGRVAIQYVNPTNPKDNFTFKCHRSNGAPNGYQDIYAVNDIAFHPVHGTLATVGSDGTFSFWDKDARTKLKPSEPMEQPITRCCFNHNGQIFAYAVSYDWSKGHEFYNPMKKNYIFLRSCYDELKPRS 354
BLAST of mrna export factor vs. nr
Match: gi|926647161|ref|XP_013789945.1| (mRNA export factor-like [Limulus polyphemus]) HSP 1 Score: 568.54 bits (1464), Expect = 0.000e+0 Identity = 261/366 (71.31%), Postives = 304/366 (83.06%), Query Frame = 0 Query: 10 IAMFGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 +++FGTS+ GG + FG S NP KD EV S PDDSVS L+FSP S+ FLIAGSWDN VRCWE+Q GQ+ PK QQ+ QGP+LDV W DDG+KVF ASCDK VK WDL SNQ ++VA+H APVK+V W+KAPNY+ +MTGSWDKTLKFWDTR+P P+M+I+L ERCYCAD+ YPMAVVGTA RGII+YQLEGQP+E+K+I+ PLKYQHRC+SVF D KG P+GFALGSVEGRVAIQY N NPKDNFTFKCHRSNG NG+QDIYAVNDIAFHP HGTLAT+GSDGRFSFWDKDARTKLKTSE M+Q I+ C F++ G IFAY+ SYDWS+GHE++NPQKKNYI+L CF+ELKPR K Sbjct: 1 MSIFGTSTNAFGGTGGSVFGSTTAGSHNPMKDYEVVSPPDDSVSSLAFSPASIQMNFLIAGSWDNQVRCWEVQNTGQTIPKAQQTHQGPVLDVAWSDDGSKVFTASCDKSVKMWDLNSNQAIQVAQHDAPVKTVHWIKAPNYSCIMTGSWDKTLKFWDTRTPQPLMTINLPERCYCADVFYPMAVVGTASRGIIVYQLEGQPQEYKKIDSPLKYQHRCVSVFLDSKGAPSGFALGSVEGRVAIQYVNPQNPKDNFTFKCHRSNGTTNGYQDIYAVNDIAFHPVHGTLATIGSDGRFSFWDKDARTKLKTSEQMEQAISRCCFNARGEIFAYAVSYDWSKGHEYYNPQKKNYIFLHPCFEELKPRNK 366
BLAST of mrna export factor vs. nr
Match: gi|675372087|gb|KFM64989.1| (mRNA export factor, partial [Stegodyphus mimosarum]) HSP 1 Score: 567.77 bits (1462), Expect = 0.000e+0 Identity = 264/366 (72.13%), Postives = 302/366 (82.51%), Query Frame = 0 Query: 10 IAMFGTSSAFGGGNQPAGFGVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 +++FGTS+ FG G T+ NP KD EV S PDDS+S L+FSP SLP FLIAGSWDN VRCWE+Q GQ+ PK QQ+ QG ILDV W DDG+KVF ASCDK VK WDL SNQ + VA+H APVK+V W+KA NY+ +MTGSWDKTLKFWDTR+PNP++ I+L ERCYCAD+ YPMAVVGTAGRGII+YQLEGQP+EFK+IE PLKYQHR +S+F DKK P GFALGSVEGRVAIQY N NPKDNFTFKCHRSNG +NG+QDI+AVNDIAFHP HGTLATVGSDGRFSFWDKDARTKL+TSE MDQPIT C F++ G IFAY+ SYDWS+GHEF+NPQKKNYI+L CF+ELKPR K Sbjct: 1 MSLFGTSTGFGTN---TGVFGNTTTTQNPMKDYEVVSPPDDSISSLAFSPASLPQNFLIAGSWDNQVRCWEVQNTGQTIPKAQQTHQGSILDVAWSDDGSKVFSASCDKTVKMWDLNSNQAIPVAQHDAPVKTVHWIKASNYSCIMTGSWDKTLKFWDTRTPNPMLVINLPERCYCADVVYPMAVVGTAGRGIIVYQLEGQPQEFKKIESPLKYQHRSVSIFLDKKSAPCGFALGSVEGRVAIQYVNPQNPKDNFTFKCHRSNGTSNGYQDIFAVNDIAFHPVHGTLATVGSDGRFSFWDKDARTKLRTSEQMDQPITRCCFNARGEIFAYAVSYDWSKGHEFYNPQKKNYIFLHPCFEELKPRNK 363
BLAST of mrna export factor vs. nr
Match: gi|1279730212|ref|XP_022909771.1| (mRNA export factor [Onthophagus taurus]) HSP 1 Score: 567.385 bits (1461), Expect = 0.000e+0 Identity = 258/357 (72.27%), Postives = 298/357 (83.47%), Query Frame = 0 Query: 23 NQPAGFGV-----GQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRA 374 NQP G+ P+S NP KD EV S PDDSVSCL FSP ++P FLIAGSWDNNVRCWE++ +G++ PK+ Q+ P+LDVCW DDGTKVFMA CDKQ K WDLASNQTM+VA H AP+K+ W+K NY+ LMTGSWDKTLKFWDTRSP+PIMSI L ERCYCAD++YPMAVVGTAGR II+YQLEG+P+E+KR+E PLKYQHRC+++F+DKK PTG+ALGSVEGRVAIQY N +NPKDNFTFKCHRSN G+QDIYAVNDIAFHP HGTLATVGSDG FSFWDKDARTKLK SE M+Q IT C+F+ NG IFAYS SYDWS+GHE++NP KKNYI+LRSC+DELKPR Sbjct: 3 NQPNTLGIFGTTTTTPSSANPMKDFEVTSPPDDSVSCLEFSPSTIPQNFLIAGSWDNNVRCWEVEQSGKTVPKSMQTCGDPVLDVCWSDDGTKVFMAGCDKQAKVWDLASNQTMQVAAHDAPIKTCHWIKGSNYSCLMTGSWDKTLKFWDTRSPSPIMSITLPERCYCADIDYPMAVVGTAGRQIIVYQLEGKPQEYKRLESPLKYQHRCVAIFRDKKKVPTGYALGSVEGRVAIQYVNPSNPKDNFTFKCHRSNATPTGYQDIYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKPSELMEQSITRCAFNHNGQIFAYSVSYDWSKGHEYYNPLKKNYIFLRSCYDELKPRT 359
BLAST of mrna export factor vs. nr
Match: gi|241257853|ref|XP_002404672.1| (mRNA export protein, putative [Ixodes scapularis] >gi|215496673|gb|EEC06313.1| mRNA export protein, putative [Ixodes scapularis]) HSP 1 Score: 567 bits (1460), Expect = 0.000e+0 Identity = 261/361 (72.30%), Postives = 298/361 (82.55%), Query Frame = 0 Query: 16 SSAFGGGNQPAGFGVGQPTST-NPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRAK 375 S FGGG F T T NP KD EV S PDDS+S L+FSP SLP FLIAGSWDN +RCWE+Q GQ+ PK QQ+ QGP+LDV W DDGTKVF ASCDK VK WDL SNQ + +A+H APVK+V W+KAPNYT +MTGSWDKTLKFWDTR+P P+++I L ERCYCAD+ YPMAVV TAGRGII+YQLEGQP+E+K+IE PLKYQHRC+S+F DKK QP+GF LGSVEGRVAIQY N NPKDNFTFKCHR+NG NGFQ+I+AVNDIAFHP HGTLATVGSDG+FSFWDKDARTKLKTSE M+QP+T C F++ G IFAYS SYDWS+GHEF+N QKKNYI+L SCF+ELKPR K Sbjct: 8 SVNFGGG--VGMFSAASATGTHNPMKDFEVVSPPDDSISSLAFSPASLPQNFLIAGSWDNQIRCWEVQSTGQTIPKAQQTHQGPVLDVAWSDDGTKVFSASCDKTVKMWDLNSNQALPIAQHDAPVKTVHWLKAPNYTCIMTGSWDKTLKFWDTRTPTPMLTITLPERCYCADVVYPMAVVSTAGRGIIVYQLEGQPQEYKKIESPLKYQHRCVSIFLDKKSQPSGFGLGSVEGRVAIQYVNPQNPKDNFTFKCHRANGTTNGFQEIFAVNDIAFHPVHGTLATVGSDGKFSFWDKDARTKLKTSEQMEQPVTRCCFNARGEIFAYSVSYDWSKGHEFYNAQKKNYIFLHSCFEELKPRTK 366
BLAST of mrna export factor vs. nr
Match: gi|1285014678|ref|XP_023019411.1| (mRNA export factor [Leptinotarsa decemlineata]) HSP 1 Score: 566.614 bits (1459), Expect = 0.000e+0 Identity = 257/345 (74.49%), Postives = 294/345 (85.22%), Query Frame = 0 Query: 29 GVGQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPR 373 G P + NP KD EV P+DSVS LSFSP +LP FLIAGSWDNN+RCWEI+ NG S PK+ QS GP+LDV W DDGTKVFMA CDKQ K WDLASNQ ++VA H AP+K+ W+KAPNY+ LMTGSWDKTLKFWDTRSPNP+MSI+L ERCYCAD++YPMAVVGTAGR II+YQLEG+P+E+K+++ PLKYQHRC+++FKDKK PTG+ALGSVEGRVAIQY N NPKDNFTFKCHRSNG NG+QDIYAVNDIAFHP HGTLATVGSDG FSFWDKDARTKLK SE M+QPIT C+F+ NG IFAY+ SYDWS+GHEF+N QKKNYI+LR C+DELKPR Sbjct: 12 GTATPNTANPMKDFEVVQPPEDSVSSLSFSPATLPQNFLIAGSWDNNIRCWEIEQNGTSVPKSMQSCGGPVLDVAWSDDGTKVFMAGCDKQAKMWDLASNQVVQVAVHDAPIKTCHWIKAPNYSCLMTGSWDKTLKFWDTRSPNPMMSINLPERCYCADVDYPMAVVGTAGRQIIVYQLEGKPQEYKKLDSPLKYQHRCVAIFKDKKKSPTGYALGSVEGRVAIQYVNPANPKDNFTFKCHRSNGTPNGYQDIYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKPSELMEQPITRCAFNHNGQIFAYAVSYDWSKGHEFYNTQKKNYIFLRPCYDELKPR 356
BLAST of mrna export factor vs. nr
Match: gi|952513619|gb|KRT80168.1| (WD40 domain-containing protein [Oryctes borbonicus]) HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0 Identity = 256/357 (71.71%), Postives = 300/357 (84.03%), Query Frame = 0 Query: 23 NQPAGFGV-----GQPTSTNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPRA 374 NQP G P++ NP KD EV S PDDSVSCL+FSP ++P FLIAGSWDNNVRCWE++ +G++ PK+ Q+ GP+LDVCW DDGTKVFMA CDKQ K WDLASNQ ++VA H AP+K+ W+K+ +Y+ LMTGSWDKTLKFWDTRS P+MSI L ERCYCAD+++PMAVVGTAGR II+YQLEG+P+EFKR+E PLKYQHRC+++F+DKK PTG+ALGSVEGRVAIQY N +NPKDNFTFKCHRSN NGFQDIYAVNDIAFHP HGTLATVGSDG FSFWDKDARTKLK SE M+QPIT C+F+ NG IFAYS SYDWS+GHE++NP KKNYI+LRSC+DELKPR+ Sbjct: 3 NQPNTLGTFGSSTAAPSNANPMKDFEVTSPPDDSVSCLAFSPSTIPQNFLIAGSWDNNVRCWEVEQSGKTVPKSMQTCGGPVLDVCWSDDGTKVFMAGCDKQAKAWDLASNQVIQVAAHDAPIKTCHWIKSSSYSCLMTGSWDKTLKFWDTRSATPMMSITLPERCYCADVDFPMAVVGTAGRQIIVYQLEGKPQEFKRLESPLKYQHRCVAIFRDKKKVPTGYALGSVEGRVAIQYVNPSNPKDNFTFKCHRSNATPNGFQDIYAVNDIAFHPVHGTLATVGSDGSFSFWDKDARTKLKASEMMEQPITRCAFNHNGQIFAYSVSYDWSKGHEYYNPIKKNYIFLRSCYDELKPRS 359
BLAST of mrna export factor vs. nr
Match: gi|345488560|ref|XP_001601846.2| (PREDICTED: mRNA export factor [Nasonia vitripennis] >gi|645006525|ref|XP_008204824.1| PREDICTED: mRNA export factor [Nasonia vitripennis] >gi|645006527|ref|XP_008204825.1| PREDICTED: mRNA export factor [Nasonia vitripennis]) HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0 Identity = 256/338 (75.74%), Postives = 293/338 (86.69%), Query Frame = 0 Query: 36 TNPNKDIEVNSAPDDSVSCLSFSPPSLPNTFLIAGSWDNNVRCWEIQGNGQSEPKTQQSMQGPILDVCWHDDGTKVFMASCDKQVKCWDLASNQTMKVAEHAAPVKSVRWVKAPNYTALMTGSWDKTLKFWDTRSPNPIMSIDLGERCYCADLEYPMAVVGTAGRGIIIYQLEGQPKEFKRIEPPLKYQHRCISVFKDKKGQPTGFALGSVEGRVAIQYANATNPKDNFTFKCHRSNGVNNGFQDIYAVNDIAFHPQHGTLATVGSDGRFSFWDKDARTKLKTSEAMDQPITACSFSSNGHIFAYSASYDWSRGHEFHNPQKKNYIYLRSCFDELKPR 373 +NP KD EV S PDDS+S L+FSP ++P FL+AGSWD NVRCWE++ G++ PK+ QSM GPILDVCW DDGTKVFMASCDK VKCWDLASNQT++VA H APVK+ WVK NYT LMTGSWDKTLKFWDTR+PNP+++I+L ERCYCAD++YPMAVVGTAGRG+I+YQLEG P E+KRIE PLKYQHRC+++F+DKK PTG+ALGSVEGRVAIQY N TNPKDNFTFKCHR NG NG+QDIYAVNDIAFHP HGTLATVGSDG FSFWDKDARTKLK SE M+ PIT C F+ NG IFAYS SYDWS+G+EF+NP KKNYI+LRSC+DELKPR Sbjct: 16 SNPMKDFEVVSPPDDSISSLAFSPATIPQNFLVAGSWDCNVRCWEVEQTGKTVPKSMQSMTGPILDVCWSDDGTKVFMASCDKMVKCWDLASNQTIQVAAHDAPVKTCHWVKGSNYTCLMTGSWDKTLKFWDTRTPNPMLTINLPERCYCADVDYPMAVVGTAGRGLIVYQLEGTPHEYKRIESPLKYQHRCVAIFRDKKKVPTGYALGSVEGRVAIQYVNPTNPKDNFTFKCHRLNGAPNGYQDIYAVNDIAFHPVHGTLATVGSDGTFSFWDKDARTKLKPSEPMEHPITRCCFNHNGQIFAYSVSYDWSKGYEFYNPMKKNYIFLRSCYDELKPR 353 The following BLAST results are available for this feature:
BLAST of mrna export factor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 5
BLAST of mrna export factor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of mrna export factor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold125_size330479:257..3502- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold125_size330479-snap-gene-0.15 ID=maker-scaffold125_size330479-snap-gene-0.15|Name=mrna export factor|organism=Tigriopus kingsejongensis|type=gene|length=3246bp|location=Sequence derived from alignment at scaffold125_size330479:257..3502- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'mrna export factor' has the following synonyms
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