antho-rfamide neuropeptide, maker-scaffold12_size759060-snap-gene-4.15 (gene) Tigriopus kingsejongensis

Overview
Nameantho-rfamide neuropeptide
Unique Namemaker-scaffold12_size759060-snap-gene-4.15
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of antho-rfamide neuropeptide vs. L. salmonis genes
Match: EMLSAG00000007110 (supercontig:LSalAtl2s:LSalAtl2s400:26835:30349:-1 gene:EMLSAG00000007110 transcript:EMLSAT00000007110 description:"maker-LSalAtl2s400-augustus-gene-0.13")

HSP 1 Score: 76.6406 bits (187), Expect = 1.927e-17
Identity = 48/99 (48.48%), Postives = 59/99 (59.60%), Query Frame = 0 
Query:   51 YSRILRSPNTFSRILRSPSTFSRILRSPSTFSRILRSS-----FSRIHRDPSSTFSRILREASKSWDKNDLKRESFSRILRAPGFSRISKS-DPLSRIL 143
            +SRILR P+ FSRILR  S FS+I R P  +SRI++ S     F+RI RDP   F+RILR            +  FSRILR PG+ RI +S    SRIL
Sbjct:   77 FSRILREPDGFSRILRKDSAFSKIARDPG-YSRIVKKSDDMNGFARIQRDPME-FARILR-----------GQTGFSRILRTPGYVRILRSPHGFSRIL 162

HSP 2 Score: 56.6102 bits (135), Expect = 1.717e-10
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 0 
Query:   47 KRD--EYSRILRSPNTFSRILRSPSTFSRILRSPSTFSRILR--SSFSRIHRD 95
            +RD  E++RILR    FSRILR+P  + RILRSP  FSRILR  + FSRI RD
Sbjct:  123 QRDPMEFARILRGQTGFSRILRTPG-YVRILRSPHGFSRILRGDAEFSRIIRD 174

HSP 3 Score: 51.2174 bits (121), Expect = 1.395e-8
Identity = 31/66 (46.97%), Postives = 37/66 (56.06%), Query Frame = 0 
Query:   40 EEDPNEGKR-----DEYSRILRSPNTFSRILRSPSTFSRILRSPSTFSRILRSSFSRIHRDPSSTF 100
            + DP E  R       +SRILR+P  + RILRSP  FSRILR  + FSRI+R  F   H  P   F
Sbjct:  123 QRDPMEFARILRGQTGFSRILRTPG-YVRILRSPHGFSRILRGDAEFSRIIR-DFHPSHNTPFQDF 186
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BLAST of antho-rfamide neuropeptide vs. nr
Match: gi|908419340|ref|XP_013070992.1| (PREDICTED: FMRF-amide neuropeptides-like [Biomphalaria glabrata])

HSP 1 Score: 57.3806 bits (137), Expect = 8.810e-7
Identity = 47/110 (42.73%), Postives = 64/110 (58.18%), Query Frame = 0 
Query:   34 LHEFLAEEDPNEG---KRDEYSRILRSPNTFSRILRSPSTFSRILRSPSTFSRILR--SSFSRIHRDPSSTFSRILREASKSWDKNDLKRE--SFSRILRAPGFSRISKS 136
            + + LAEED +E    +   + RI +SP++F RI ++PS+F RI +SPS+F RI +  SSF RI + PSS F RI R       +NDLK E        +A  F RI KS
Sbjct:  131 IGKSLAEEDSDEDVDKRASSFVRIGKSPSSFVRIGKAPSSFVRIGKSPSSFVRIGKSPSSFVRIGKVPSS-FVRIGRSI-----ENDLKSELDDIDEEKKASSFVRIGKS 234
The following BLAST results are available for this feature:
BLAST of antho-rfamide neuropeptide vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000071101.927e-1748.48supercontig:LSalAtl2s:LSalAtl2s400:26835:30349:-1 ... [more]
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BLAST of antho-rfamide neuropeptide vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of antho-rfamide neuropeptide vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 1
Match NameE-valueIdentityDescription
gi|908419340|ref|XP_013070992.1|8.810e-742.73PREDICTED: FMRF-amide neuropeptides-like [Biomphal... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold12_size759060supercontigscaffold12_size759060:476455..478223 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteP:neuropeptide signaling pathway
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold12_size759060-snap-gene-4.15-mRNA-1maker-scaffold12_size759060-snap-gene-4.15-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold12_size759060:476455..478223-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold12_size759060-snap-gene-4.15 ID=maker-scaffold12_size759060-snap-gene-4.15|Name=antho-rfamide neuropeptide|organism=Tigriopus kingsejongensis|type=gene|length=1769bp|location=Sequence derived from alignment at scaffold12_size759060:476455..478223- (Tigriopus kingsejongensis)
GATATTTCTGGCTGATTGTGTTGATTGCCTTGGGCCAGAGCTGGGCCAAT
CCAGAGGAATCTGCCACTGACAACGAGGCCTCAGTGGATGGAGGAGGTCT
CGAGGCGTTTCTTCATGAGTTCTTAGCCGAGGAAGACCCTAACGAGGGCA
AGCGGGACGAATATTCAAGAATCTTGCGGAGTCCAAATACCTTCTCGAGA
ATCCTTCGAAGCCCCTCGACTTTTTCTAGGATCCTTCGTAGTCCTTCCAC
CTTCTCGAGGATTCTGAGGTCCAGCTTTTCCAGGTGACAATCCCCAATAG
ACATTTCAGCCGAGACATATTTTTCGGGAAGAGTTTACATAGCTCTCGCA
ACCTCTCAGGCTTTTGGAAGGGTGCAGACACTCTACTGTACTACATATGC
TCTGTTGTGAACATGATGTAAAGGGATAACCAGCTACCCAAGACCAACAT
CTGGCAAGGGATATGAGATGGGGGAGGTGGTTCGACATCCATTAATAAGG
TAGAACCTCAAAATTAGAGTGAACATATTTGTGGAGATAAAAAATTAACC
TCACCACATTTTTTTTGACACTCCCATTTAGCGGTGAACTTCTGTCTCAA
TGTTGACGAAATTATATCCCCGTTATATTTCTGGTCTAATTTCATGATTC
TTATCTTGCGAACTGTTGGATGTCACTTTCAGTGTGACTAAAAGAGGAAG
GTCTGAGAAATAGTTAAATTGTTTTGAATTTTGCACAACTTGGAATCGTT
GGATATTGACATCTGTGGGATTGGGCAACACTGATTGGTTCTCTGTTTTA
TTAGGCTCTCAAGGACAGAAATATCTACACAGGGCTTGCCCCAAACCAAA
CCTGTCAAGACTTGACGTTGCCTACTTATCAGCACAACTGGAAATCCCAC
ACCTCCAGACAGGAATGAAGGGTGTTGTTTTAGGTTTTCTTCGTCTTGGG
TGGTTGACAAACTGGTCTGATAAGCTAAAATGCAAAGCCAATTATGTAAT
TAATGATTTTCAGTTCCTCACAACCCTTCTGCACCCTCATAGCAGGAGCT
TCATCAGCTTTGTTTGCATCCTGACAACCTCGGCACCTAGGGATTCAGGG
TGCCCAATACTGTACTTTGTTATTAGAATTGCCACTTTACTGAATACTTA
TGTAGTCTATCCTCTATCAACAAACGCTATTAACTCTGGATTTGGATTGC
TTTCAGGATTCATCGTGATCCTTCCTCGACGTTTTCAAGGATCCTCCGAG
AAGCCAGCAAATCCTGGGACAAGAACGACCTGAAGCGAGAGTCCTTTTCC
AGGATCCTCCGCGCTCCAGGGTTCAGTCGCATTTCCAAGAGTGATCCCCT
TTCGAGGATTCTCTAAGTCCTGAACAACTAAATCTCTTCAGCGAGGTGAC
GGCATGAGGCTCGGACGAGGCAGTGCCATTAAACAATGGAGATCCTGGCT
CGGGATTGACACTCTCTAAAGGCATTGCCTCTCTTAAAACGAATGTATCG
CACCCCATTTGACTGCCGATGCAGTTTTTCAATTCTTTGTGGGGAAATAT
ATTTATTCTGGATCTGCGCGACATTGGTGAGGAGGAATCTGTTTCAGAAT
GGTATCCAACGTGTACTCTCCTACATCCCATTATGATGCTACTTCAATTA
TTTCCCTTATGAATACTTTACCAGTACAGAAATGTTTTGTATATAAACAC
TATCCTGATATTTTTTAAGCACTGTCGAACCGTTAATTACTTGCAAATAC
ATTTCCATCTGTACGAACA
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Synonyms
The feature 'antho-rfamide neuropeptide' has the following synonyms
Synonym
Tk05573
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