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Associated RNAi Experiments
Homology
BLAST of hypothetical protein JAAARDRAFT_120563 vs. L. salmonis genes
Match: EMLSAG00000011300 (supercontig:LSalAtl2s:LSalAtl2s779:208823:209781:1 gene:EMLSAG00000011300 transcript:EMLSAT00000011300 description:"augustus_masked-LSalAtl2s779-processed-gene-1.0") HSP 1 Score: 59.6918 bits (143), Expect = 1.206e-11 Identity = 37/129 (28.68%), Postives = 60/129 (46.51%), Query Frame = 0
Query: 28 SYQMGPMEIFLVFLLFVLWFYALRRMYRVWTTILNFSDLNTDSFQRNSKGWDAFIQWALEHIRGRKQSGESRRQSNSKGGLEED-KVEDGSIAGGSAAIEGVEMETNPRGDPILSQRDNKIRHHSHSIV 155
S + G E+ V L F+LW Y+ R+Y VW LNFS+ N Q GWD + W LE ++ ++ S+ + +EE +E I G +E + I+S+ ++I H S++
Sbjct: 84 SMESGIAEVSFVILAFILWLYSFYRLYSVWQNTLNFSEANIQGPQ----GWDFLVNWILERVQVKRIKSISKSKKYESYNMEEGINIELDHIPSGHPP---TPVEIDGAFSNIISESMHEIHHSYPSVL 205
The following BLAST results are available for this feature:
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold133_size323035 | supercontig | scaffold133_size323035:118019..127206 - |
Analyses
This gene is derived from or has results from the following analyses
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold133_size323035:118019..127206- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below. >maker-scaffold133_size323035-snap-gene-1.12 ID=maker-scaffold133_size323035-snap-gene-1.12|Name=hypothetical protein JAAARDRAFT_120563|organism=Tigriopus kingsejongensis|type=gene|length=9188bp|location=Sequence derived from alignment at scaffold133_size323035:118019..127206- (Tigriopus kingsejongensis)
CGACTCGAAGCAAGTGTTTGTTATTCTTTGAATATTGCGGGCTGGAACGA
TCTCTTTTGTTTGTGCTGAGGGTCCAATATTTGAATATCCCGTGGCTCTA
ATGGAAAGAGGTATTTCCTAGTGGTACTTGGTAGCGATCAAAGTGCACCC
AAATGGGTCCATTGACTTAGTCCATTGGGATTTGCATCGAGAATGAGGCG
CTAATGCAAACATTCCTATAATGGCCAAGACGCCAATCGACGACCCAGAC
GATTTTGAGGCAGATCAAGGCGATGATGAGTTCCAAGTGGGTCCCTATCC
CTCATACCAAATGGGTCCCATGGAAATATTCTTGGTCTTCCTGCTCTTCG
TTCTCTGGTTTTACGCTCTCCGTCGGATGTATCGGGTTTGGACGACAATC
TTAAACTTCTCCGATCTAAACACCGATTCATTCCAAAGAAATTCCAAAGG
TAAATCGTCATCGAAACATTTTTTTATCCGTGCTGAGGCAAGCAGAACTA
AGCTCTTAACCATTCCACTCCATTATGGCTCTAAGTACTAATAATGAGAA
CATTGACATGAGTAAAGCAGCTCTAGCGGCAAATTTTAGGTCATCCAAAT
TGGAAGGAAAATATGGACAAAATATAGGAATTGACCCAGTTTACTTTGTC
TGCCGTGCTATCGCTTTTGTACAAAGTCAGCATTTTTTTGCCACATGGCG
CCACAATCGTCTCTCGCGTCATTACTCTAGGAAATATGGGCACTAGGTGA
TATTTGTTTTTCATTGCAACGGGGGTTCCTGAGTTGTGGATTGGAATCCG
AGCTGGCAAAATTTAACCTAATGAGCCATGACCATCTCTTGGTAGGGTAC
TAGCAAATGTGATATTTTCTGCTGCTGGCAGGCTTTGATGTGCAAGTGAC
GCATGTTTTCCATGTCAAATATATAATTTCTAGATACACCCGCTGCACAT
ACTAGACTAGATTCCTATTGGTTTAACAGTTCCAGATATCGGTTGACGTC
ACAAAAACAAAAACTGAACAGGGTGTGTAATGATAGTCAGGATAATGGCC
TTGTCTATGCGTAAAGAGAGAGAGATTGGTGTTCTAATGAAATTTAGCTC
GTTTTCGGGGGTCTACACTGTACACAGTTTGGTTAGAAAATGCTCGATTC
ATTGCTTATTGGAGCTCTGGATGACAGGCACATAAAGGTTAATTGCTGTT
TACTTACCTGAGTTTACAGGCACTTTCAAACTTCCAACATTATTGTAGTT
TCCTCATCGAATCATCATTTCATGTAAATATTATTTATACTACATGCCAA
GGGATACCACCAAATTTTGTATTGCATATTCTTCAGTTTCATTAAGCAAC
AACAAGCTCTGACGAAAACTTTGGCCAATTCATGGTGAGAAAAGAAAGTT
ACTTAAAGTACTGCCTGCCAGATGAAATTGACATTTAAAGATCAAGTCAC
ATTTGAGGGAAACACGCTCTCTCAAAACCATATTACCGCTAACAACAGAT
ATGTGATACTTCTACTCAGTACATATATTTGGCCTTTGTTCTCCAGATTT
TGTTATCCCGTTCAAATACAGTGGAAAGTCGTCAAGCAAAAAACCATGTG
ACGAGAAATAATGATAGTTAGATTTTCAACATCCGGTCCGTGTCAGGGAC
TATCGAGTATCTCTGTAAGAAGATTGCTATGTTCGCAAAAACAATTGCGA
TGTTTTTTTTTGTTTGTTTGGATGCCCCGCTGCAAATTCATCATCAAGTA
TTACTTTACCCTTGAGGTAAGGTATTGCCACAGATCCGACCCATTTAATC
ACGGACAGGATGAAAACAAATGCTTTGAGTGATCATTACTAGTAGGAGTC
AACAACATGATGCCGGAGACTCGAACCCTGGCCACTCGGCACCTCGCTCA
CTGACACTGAGCTATGGGGTCTTCCCTCCGATATGTGTGTCACTCAACAC
AGTGAACAGATTGTGGAAACGGTTGATAACTGCACAGAAGGGCAAAAACA
CCCTTGGGCGTCTTTTGGGGTTCAAAACAGATTTACTTAAACTCTATTCG
GATACTATCTTGGTCCAATTTCATATGCATATTTGCACATTGCTGTTATA
TGCCCAGGAGTATGTGTTATTGTGTAGTATAGTAGTACAAGTGTCAATGA
AGCAACTTTTCTGAGGTTGATCTAAGAAATCTAAAACACTAAAGGTTTAA
CATTACGTGCTATGATATCAAATATACCTAGTGGTGCACCAAAATGACTT
TGAACAAAACTTTGACTCTTAGACAAATAGTATTCTTCCAAATTGTCTCT
AGTTTTAATTTTTTCCTTGACTTTTCACAACTTTTGTCTTCCTTTTTACC
TTTGACAGCTACAGTATGTCCCCGGTCTTTTTGGCTTTTCATATCTTGGT
TGTTGTTTTTGCTTTGTTCAAAATCCTCAACAGGTCCCATTGGACATTTT
TTGCACTGATAAATTTTGTTTCTGCAGATTTTTTGTAAATTTAATTATGA
TACAATTGACAGCAATTTTCAACATGAGTTTTGAAATTTCCAACTATGAG
TTTTGAAATTTCCAACCATGAGTTTTGAAATTTCCATCCATGAGTTTTGA
AATTTCCAACCATGAGTTTTGAAATTTCCATCCATGAGTTTTGAAATTTC
CAACCATGAGTTTTGAAATTTCCAACCATGAGTTTTGACATTTCTGCGGT
TTCTCCCTTTCTTATTTGTTTCCTGGTTAGGTTGCGTTTTGTTAGATTTT
GCGTATTTTAGATAGTCGCAACAGACATTTCTTCGAGAAAAAGGAAAATT
AGAACGAGGCAACACTTTGAAATGTGTGCGGGAATTCATTCTTTGCGTAT
CAAAAGTTACAAAGATAGTACGGTATTTAAAAAAGTTTGATAAAGTAAGT
ATAAATATGGTAAAAAATAAAAATTTGAGGAAGCCATAGAAGACATAGAT
CAAGTCAAAACTTAAATTGGCCTAAAATTAACGACTTTTAGTCCATTAAT
TGTTTGAATTTTGAAACCCAGTGTAGTGCAATGGCAGAGTGTCCTAATCA
ATAATCGACCATTGCGTTAACCGAGGTTCGTTGGTTCGACCCATGGTCCG
GCTCGTGGGTCCACAAGTTCGAGCAGTTAGGGGAATGCATTTTAATTTGA
TTTATGTACAATATGCCAATTTTGCATATTTGGGTCCAAATTTGCTTTGA
AATGATTTGGAAATCAAGGTAAATGCGGCCTTATTGGAGTCTCATTCAAT
TTCGACGCCATCACCTGATTTCTGACACTCGGACAGATTGCTCATCTCCT
AGCTTTATCGATCGTGGCTTGTTTGTGGTTGAGGATACCAGCAGCTTGTT
AACCATCAAGCTGTCGGGAGCTCAAACTTGAGGGATGTTTTCGTGAATCT
TCCGAGTGTCGGCAATTAACCTCAAATTGAAAGTAGGTCTCTCTACCTAT
TGAATTAGGAGGAGAAGGAGGGGAGTCGATTTAACTGGGTTGTCACTCAT
GAATTGGGCAGGAGCACATTTTTGTTTGGAGTGGAACATTGCTCGAACAT
TGGAGCTTTTAAAGCGGCCTGCAGCATTTGAATTATTTATCTGCTAGAGC
AGTTAGAAATTGCAATTATCCCTAATGTTTTAAAAGTCGCTCAAATAAGG
GCTCAGTCTGGCCCTAGTGTGCTGTGTGTACAAACTGTTCAGTGCATGCA
CCCAATGGTGCTGCAAAACCTCCATTTACCAGTCAGTATGTGGTTATTGG
GTCATACATGGGCATACGACAGATTCCAGCCTAGTGTAAGCCATGGACTA
CTGCAGATATGTGGTTGTTCATGCCGAAAGTCACCTACAATAAAGATCAT
ATCGTGGTAATGTTGTAAATTTCTGCAGTTTTACTAAATTTACGCAAATA
ACTAATGAAATAATACCAGTACTTTCCGTGATTGCTTAGAATAGTGTGCT
CTTCAAATAAGTATTGACTCCGTGCCACACACTTCTTTTTATACTTAAAA
CATAAATTTGATGACACCAATCTTTCTTCTACAAGCATATTGTTTTTGAT
GATATGCGAAGTTCTACTTAGCAAAATATGAATTTACCATAAGTATTATC
ATATCTGATTAAAACAAATATTACTTTTAATATGAGGTATTCATCCAATA
ATTTTGAAAAGTAAAAAGGTGCAAGCCTTCAGGATTAGATATATTATATC
ACTACCTCAAATAACGAGGGTATACTTGGTTATATTCCATGTAGGGTTTA
AGAGTCCATCAACTGTAGTCACTCTGAAACCTATCTGAACTTGTAGTATG
GGTTTAGTATGGGTTTATAAAGTGAATGGTCACTTGTAAAGATGTCAGAG
ACATAAATGCGGTTGAATACGTCGATGAGCCTACGTAACTATTAACAAAG
CATTCGAAAACGGTAAAGATAAGGCATTCTAAAACGGTAACGGTTTGTGA
AATGTCCCCGCAATTCTCGCCCGGCTTTCAAGCTTCCTAACCCTTTGGAC
ACATTTTTCGTTCTGTGCGACCTCCAGGTGATTCTAGTACTCCATGCCTA
ATGCAACACTAAACACTTTGGTGATTCGAAGTAACATTCACTTTTTGTGT
ACACTGTATGCTTCGATGAAAAATTACTTGTATCATCCCCCCCCACCCAA
AAAAAAACCCACCCCACTGTTAGGTTGTATTTATGCCTTTTGGTTCAATT
ATTGTCCCCTGAACTAAAACAAACAATTTCACATTTCTTGTCCATTGATC
AGTTTGGAATAAATATCACACTTCATTGGGTTCAAACACTGGCTCTGATT
GTTCCTTGGGTTAGGTTAGGTGTGGTCAAGTATGGACTCTCATTTAGGGC
ATAGGATCCTTGGTCATGGCACTTAGGGGATTTTCATCATTACGTCTCTG
GACCAGCAATTACAGCTTGTTGAGAAGTGTGCATGGATACTTGTGTAGGA
AAGCACACATGACTTTACTTAATTTGGGGCACTATTGCGTGTAATGATGA
CTTGACGTGCTCATATGTACTTCAGCATTTGGACCACGCACTGTATAAGG
CTCGTGTTCTTGGCCTTCAAGGGCATTATCAGCCCTTTGGGAAAAAATCC
AAAGGCTAGGTGCACATTCTCAAATTGAGAGTGGATTTGCACGTTGCTCT
GGAAATATTCGTTCCCTCGAGACTTAGAATTTCCACAGGGTGAGCTGAAC
GTCCACGAACACGACACAAGTGCCCTGGCATCATCAATGCAGGAGAGGTT
TTATCAAAAGGCCTCCACGAAATATAAGGAATGCGACTTTAAAAGAAAAA
GGCTACACCAAAAGGTTGAAGTTCACGACTGGGAGCAAAATCTGCAAAAG
AAATAGTTTTCAGATTGTTCAAGCGCAACAATAATCCTGCCAATATGAGT
GTGTAAATAAACACTTTACGATTACCTCGGCTAAAATAACATCTGTCAGC
ATACTAATAAATATTTGATTGCTACGTACTTGCAAACAGGAGCACATTGT
GGGCAATTCGGCTTGATATGAACATTTCATCGTATTTGAACCAACATACA
TTCTTCACGTTGAACGCTATTCGATTATAATGATTACAACCTGCCAAGAT
GTTTTCATGATATCCTGTAGTCTAATAATTGACTCTCTCTGGGTGGTTTT
CACCTGGCAATTTAATTGTCACGGTATGTAAGCCACTCACAATCTGAAGT
TAAATATCTACTAAACCAACGAAACGTATCTGTCGGCTGATTTCCAAATC
AAAGTTTGAAAGCTCCAAAGTAAGGCCAAACTGGGCGAGCTATCGGCCCA
AAAGCTATTTCCCACCCAAAAAACGTTTGAGTCTATTAACTATGTCAACA
ATATGCTCGAGAAATGTTTTCATCAACATTTTGGAAAAAACACATTTTTT
AACAACGTTTCAGATCGCTTTTCAGTTTCCAGCTATTCAAAAAAACTTGA
TAATTTTTGGTGTGTTCAGACTGAAAGATGAACAGGTTCATTAATATATT
TAGGACAAAAAATGAAGCCCATTTTTGCCTAGCTTTGTTGAATATGTTTA
ATCTTTGAAATGTCTCAGAGTCTTCGGCACGCCCTGTTTGTTGATGCTCA
TCATTCTTTGGGATGGGAATTTCTACAGCCTATGCATGTCTGAACTTTCG
TGCCGAGATGAAGCGAATTTGATTTGTCGTCTTATTCCTCCCAATCAATA
TGTAATCCGTCAGAGCAAGAAGACTTCAATCCAAAGAAGAATCCAGAAGA
ATCTGGTCTTCTGGATTGCTTGCCAACCAGAAAAATGCGTGCAACGTACC
AAATCCACGCTTTTATGGTGATTACAAGTTCCTCGCTTCGTGTTTCTTTT
CGAGGGGATCTCATTGAATCCAACTGAAAGACTCTCCAAAGGATTGCCGC
TGGAATATATTACTGTCGCATTGAAAAGAAATGGGAAAGTTGACCCATGC
ATTTTCAATCGCTTAATCATACATTCATAGGGAACATACGCTATGCTGAT
GTTTCTAGCCAGAGGATCAACACTGCATACTATACGTACACACTACATAA
CTGTCGTAAATACAATAAAATAATGATATATAACGTATTATATACATAAT
ATAAATATGAGATACGTACATGTACGTTAAAGAGGTTCATGCATGGGGAG
TCAATACTTAATAGTGAAAAAATGCTAGTCAGTAGTGCTAGGACATTTTA
TGACATGATATGTACAAAACTTAACGGTACCAGACGGGTAGAACAACAGT
ATAAACAAAACACTATAATTAAGGAAACAAAACTATATAAAATTCAACTA
CAGTACATCTCTGCAAGACGAAGAAACGCAGAAAGTGTGAGAAAAACTCA
ATGCAAAATGCTCTAACGAAAACCAAGACAAAGGTATGAACTCATACAAG
TCATACGAAGTACATATGTATACGTAGAATAACATCAGCGATAGAAAAAA
ACATCAGCGAAACAAAAAACATCAGCGATACAAAAAAACACGTCACAAAA
AACATCAGTGATACAAAAAAACATCACCGATACCAAAAACATCAGCAATA
CCAAAAACATCAGCGATACCAAAAACATAAGCCATACAAAAATCCGTTCC
AATTGTCCTTTAAAAAAGCACGCTTTCAGGGTAAAAATAAGCACCAAAGA
AATTACTCGTAACATCGGATTCGTATTGCAATTGGTTTGGCCATTGGACG
TACAGTACATAAGCTTGAAAATACGCTGGTTCTCAGGTTGTAATGGATGG
GCCATATGTTTGCGCCCACTTTCACACGCATGACATGACTTTTGGACAAA
ATTGTTGGCATGATCAATGTACGTTTTCACCAAACCCATAAACACCACCA
CATATTACGGAGGTTAAGTATCATTTTCGTGCTTGATTTTGCACCAACGA
AAGTAGCAAGTTTTTTTGCAGAAATATCGAACAAGCTCTGAGCGTTTTCA
TGAATTTTGTGAAGGGACTCCAAGAAAAGTGTTCTCAACCTTAGCAAATC
TTAGATATGAAAGTGTGTGTTATCGCACCTTCCGGTGGTTTCGTGTCGCA
CCATGGAGCATCCATGGTGTACACAGGGCCCCCTGATGTTATTAGCTAAT
TTAGCTAGTCAGCGTTCAGCCCCGTACAATCCAGTTCCAACCACTACTTT
ATTTTGTGGGAATCCTCAAGGGACCTTTCCTCAAGATGTGGCCGCACCTG
AGTATTCAACAATGAAAATGAAATGAGTTTGAGAAAATGAGAACAAAAAG
TTTGACATTTTCTTTCGTGGCACAATAACTCAGGATTTTTTTGCAATTCA
GATGTCTCTTTATGTTGTGTCTCTAGTAATGAAATGTAGCCATTTTCAAG
ACGTGACTCAGACGCGGTGTTATAACATCATTTAGACATGGTATTGCTCA
TTTACAAGATTGGATGACAGACGCCTCAATATCACGATGGGTGGTCGAAT
ACATTTGCCCCACCCTGTACACTGAAAAGCGAGAAAATGCAATCCCGAAA
GCTGTAAGCAATCTCGATCGAGTAAACACAGCTTTATGCAACCACAGCAT
TAATGAAATTCTCGGGGAGAGTGGAATTAGTAGCAATTGAGTAATGTAGG
CAATATACATAACTTTTAATTCCAAAATACCTCCAGCATCGCCCATGGAA
GAATGCTGAACGACGATCACATTATCCAGCAACCATCAAGAAGTGGACTT
CCAACTTTTTTTCTATCGCACACTCCCCTCACTTTTCCATCAGAAGTTTA
ACACATCTTTGCTCGCATTCTGACTTCATTGATGTATAAAAATAGTGAAA
GGGCTTCAAACTAGAATTCGGCCAACTCTCTGTGAGGTGAAGTTAGACAT
AATATTGAAACATATTGTTAAAGGTAACCAAGTGTTTGGTAGCTTTCCCA
GCCCAACGACGCCTTCGATGTATGTAGAACGTTAGTCAACATGATTCGGA
AAAGTCTCCATGGATTGGTTTCCAAATAAAGTTAGAATTTTAAGCACATA
ATCATGGACCCTGGATCCAAAAATATGGATTATATCAGAACTTTGTATAA
TAATCTCCAAGCACACAACTCATGGTAAGACAATAACACCAAAGGGTGCA
TATTTATTCTTGACACTCTCTGTTTTGGAGCAAGTCTCATTAATTTGAAA
GTGGAGTAGCCACTAAATTAAAGCCCTCGAGAATTTCAGTCAGGTGAAAA
ATGTCTTATCACGAAAAAGGGGCCAAATATGGCAAGAGCGTCGAATAGAC
TCGAGGCCTTCTAATAACCTGGGAAAAGGGTTTGGAGAAGGGTCTCAAAA
GAATATGTACACCTCGCCCTCTGACAGATCCGATATGACATTGAGTCCGT
CGCTCTCTCTCACTCACACACGTTTTCTCCACTTTGTTCCAGGCTGGGAT
GCTTTCATTCAATGGGCCTTGGAACACATCCGAGGTCGGAAACAGTCGGG
AGAGAGTCGACGTCAATCAAATTCCAAAGGCGGCCTCGAGGAAGACAAGG
TGGAGGACGGCTCTATTGCTGGAGGAAGCGCCGCCATCGAGGGTGTCGAG
ATGGAAACCAACCCCCGAGGGGATCCAATTCTGTCCCAAAGGGACAACAA
AATCAGACATCACAGCCACTCCATTGTTGAGATCGAGATTGACCAACACC
CCGACTCGGAAGTCCAAGTTCAACAAAGCCAAGTCTAA back to top
Synonyms
The feature 'hypothetical protein JAAARDRAFT_120563' has the following synonyms
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