dna polymerase theta isoform x3, maker-scaffold13_size735724-snap-gene-6.23 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of dna polymerase theta isoform x3 vs. L. salmonis genes
Match: EMLSAG00000010310 (supercontig:LSalAtl2s:LSalAtl2s682:81241:89558:1 gene:EMLSAG00000010310 transcript:EMLSAT00000010310 description:"augustus_masked-LSalAtl2s682-processed-gene-0.9") HSP 1 Score: 265.774 bits (678), Expect = 7.616e-81 Identity = 145/290 (50.00%), Postives = 194/290 (66.90%), Query Frame = 0 Query: 15 RSTPPTSNFSLGK-ARQMGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETVAILANCLPSAIETIFINASPFESEKKGESESEREVAKRREMRSFWVTGQRGLTIAEAAQAMVDEAREVLQKDLGIRIDWNSNEDRQRNLSIIINES---ESKKKEMRPKSRKTRNSG-GKKTNTPETSARVYSK--KPVLVLSPHLSSLGMESSAHKRRSLEMSNSN 297 R+ T N+S+ K + M HQR YTALAL+DLVNE L V +KYGASKGMLQSLQQ +STFAGMVTVFC +LGW+NLELL+ QFQ+RLQFGV REL+DLCRL TLNG RARIL+ + +++VA +AN P IE I +N+ PFE++K+ E+ESE +V +R+ MR+FW+TG +G+TI E ++ +V EAR +LQKDLG+ ++W ++ L + S SKK ++ PK + N+ +KT S R +K PV+V P L ME H LE +N Sbjct: 662 RAMRGTVNYSVPKQIKSMATHQRXYTALALNDLVNEVSLYEVTKKYGASKGMLQSLQQAASTFAGMVTVFCARLGWHNLELLVSQFQNRLQFGVQRELVDLCRLSTLNGHRARILYNSSIDSVASVANSSPHVIENILMNSCPFETKKRNENESEFDVKERQSMRTFWITGLKGVTIKEGSEMIVSEARVLLQKDLGMELNWGQVQEDSSTLKRELETSRVNSSKKVKLSPKIFQIPNTDIFEKTKLISPSPRHDTKFTSPVIV-KPCSDKLSMELK-HVNNKLEADFNN 949
BLAST of dna polymerase theta isoform x3 vs. SwissProt
Match: gi|325511332|sp|O75417.2|DPOLQ_HUMAN (RecName: Full=DNA polymerase theta; AltName: Full=DNA polymerase eta) HSP 1 Score: 202.986 bits (515), Expect = 5.987e-57 Identity = 98/189 (51.85%), Postives = 135/189 (71.43%), Query Frame = 0 Query: 29 RQMGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETVAILANCLPSAIETIFINASPFESEKKGESESEREVAKRREMRSFWVTGQRGLTIAEAAQAMVDEAREVLQKDL-GIRIDWN 216 RQM IH+RF+T+L L DL++E PL+ + QKYG ++G +QSLQQ+++ +AGM+TVF +LGW+N+ELL+ QFQ RL FG+ REL DL R+ LN QRAR+L+ + TVA LA +E I NA PF+S +K E E V +RR MR+ WVTG++GLT EAA +V+EAR +LQ+DL + + WN Sbjct: 711 RQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNAVPFKSARKAVDEEEEAVEERRNMRTIWVTGRKGLTEREAAALIVEEARMILQQDLVEMGVQWN 899
BLAST of dna polymerase theta isoform x3 vs. SwissProt
Match: gi|74872961|sp|O18475.1|DPOLQ_DROME (RecName: Full=DNA polymerase theta; AltName: Full=Mutagen-sensitive protein 308) HSP 1 Score: 192.971 bits (489), Expect = 1.339e-53 Identity = 89/188 (47.34%), Postives = 130/188 (69.15%), Query Frame = 0 Query: 29 RQMGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETVAILANCLPSAIETIFINASPFESEKKGESESEREVAKRREMRSFWVTGQRGLTIAEAAQAMVDEAREVLQKDLGI-RIDW 215 +QM IH+RFY ALAL +LVNE P+ VV KY +GMLQSLQQ +STFAG+VT FC L W L L++ QF+DRL FG+HR+LIDL R+ L+ +RAR L + ++ LA P +E + N+ F+S K+ + E+ E AKR +R+F++TG+ G+T++EAA+ ++ EAR+ +Q ++G+ I W Sbjct: 834 KQMQIHKRFYIALALEELVNETPINVVVHKYKCHRGMLQSLQQMASTFAGIVTAFCNSLQWSTLALIVSQFKDRLFFGIHRDLIDLMRIPDLSQKRARALFDAGITSLVELAGADPVELEKVLYNSISFDSAKQHDHENADEAAKRNVVRNFYITGKAGMTVSEAAKLLIGEARQFVQHEIGLGTIKW 1021
BLAST of dna polymerase theta isoform x3 vs. SwissProt
Match: gi|803374932|sp|Q8CGS6.2|DPOLQ_MOUSE (RecName: Full=DNA polymerase theta; AltName: Full=Chromosome aberrations occurring spontaneously protein 1; AltName: Full=DNA polymerase eta) HSP 1 Score: 191.815 bits (486), Expect = 3.657e-53 Identity = 95/189 (50.26%), Postives = 132/189 (69.84%), Query Frame = 0 Query: 29 RQMGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETVAILANCLPSAIETIFINASPFESEKKGESESEREVAKRREMRSFWVTGQRGLTIAEAAQAMVDEAREVLQKDL---GIRID 214 RQM IH+RF+T+L L DL++E PLK + QKYG ++G +QSLQQ+++ +AGM+TVF +LGW+N+ELL+ QFQ RL FG+ REL DL R+ LN QRAR L+ + TVA LA + +E N+ PF+S +K E E +RR MR+ WVTG +GL+ EAA +V+EA+ +LQ+DL G+R D Sbjct: 708 RQMAIHKRFFTSLVLLDLISEIPLKDINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLIRVSLLNAQRARFLYASGFLTVADLARADSAEVEVALKNSLPFKSARKAVDEEEEAAEERRSMRTIWVTG-KGLSAREAAALIVEEAKMILQQDLIEMGVRWD 895
BLAST of dna polymerase theta isoform x3 vs. SwissProt
Match: gi|803374934|sp|A0FLQ6.2|DPOLQ_CAEEL (RecName: Full=DNA polymerase theta) HSP 1 Score: 121.324 bits (303), Expect = 5.315e-29 Identity = 68/200 (34.00%), Postives = 109/200 (54.50%), Query Frame = 0 Query: 29 RQMGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETVAILANCLPSAIETIFINASPFESEKKGESESEREVAKRREMRSFWVTGQRGLTIAEAAQAMVDEAREVLQK---DLGIRIDWNSNEDRQRNL 225 + + IH RF++ALAL DL++E + V+ KY +G LQ+LQ S+T+A M+ FC +LGW L+ L+ F RL FGV EL +L + ++GQRARILH V ++ L+ C S + A P+ S + E W+ G+ + + AA+ + + AR+VL + +LGI ++ E+ + N+ Sbjct: 651 KLLQIHIRFFSALALFDLISEMSIYEVSHKYRIPRGCLQTLQSQSATYAAMIVAFCLRLGWTYLKALLDGFATRLLFGVRSELSELVAIEGIDGQRARILHERGVTCLSHLSACDSSKLAHFLTLAVPYSSSNSNDGLGE------------WLFGEPRMRVDVAARTLKERARKVLIRRVQELGISVELPKFEENEENI 838
BLAST of dna polymerase theta isoform x3 vs. SwissProt
Match: gi|75218698|sp|Q588V7.1|TEB_ARATH (RecName: Full=Helicase and polymerase-containing protein TEBICHI) HSP 1 Score: 105.145 bits (261), Expect = 1.734e-23 Identity = 53/156 (33.97%), Postives = 95/156 (60.90%), Query Frame = 0 Query: 20 TSNFSLGKARQMGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETV-AILANCLPSAIETIFINASPFESEKKGESESEREVAKR 174 TS L + + + +RF+ AL L LV EA + V + + ++GM+Q+LQ+ + F+ MV+VFC++LGW++LE L+ +FQ+R+ FGV E+++L + + G RAR L++ + T AI +P ++ +F +S + +E G+ +AK+ Sbjct: 1129 TSMKMLSDEQMLRVCKRFFVALILSKLVQEASVTEVCEAFKVARGMVQALQENAGRFSSMVSVFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTSIPYIKGSRARALYKAGLRTSQAIAEASIPEIVKALF-ESSAWAAEGTGQRRIHLGLAKK 1283
BLAST of dna polymerase theta isoform x3 vs. SwissProt
Match: gi|296434521|sp|Q8TDG4.2|HELQ_HUMAN (RecName: Full=Helicase POLQ-like; AltName: Full=Mus308-like helicase; AltName: Full=POLQ-like helicase) HSP 1 Score: 54.299 bits (129), Expect = 8.264e-7 Identity = 36/127 (28.35%), Postives = 66/127 (51.97%), Query Frame = 0 Query: 24 SLGKARQMGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLG--WYNLELLIGQFQDRLQFGVHRELIDLCRL-GTLNGQRARILHRTKVETVAILANCLPSAI 147 ++GK + R Y + L+ L+ E + V++K+ +G +Q+L +++F+ V FC++L W LL+ + +L + V ELI L + G L G RA+ L+ +++ LAN P + Sbjct: 922 AIGKKVDKNVVNRLYLSFVLYTLLKETNIWTVSEKFNMPRGYIQNLLTGTASFSSCVLHFCEELEEFWVYRALLV-ELTKKLTYCVKAELIPLMEVTGVLEG-RAKQLYSAGYKSLMHLANANPEVL 1046
BLAST of dna polymerase theta isoform x3 vs. nr
Match: gi|762094681|ref|XP_011429829.1| (PREDICTED: DNA polymerase theta [Crassostrea gigas]) HSP 1 Score: 233.417 bits (594), Expect = 5.096e-65 Identity = 111/195 (56.92%), Postives = 145/195 (74.36%), Query Frame = 0 Query: 29 RQMGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETVAILANCLPSAIETIFINASPFESEKKGESESEREVAKRREMRSFWVTGQRGLTIAEAAQAMVDEAREVLQKDL-GIRIDWNSNEDRQ 222 R + IH+RFYT+L L DLV E PL V +YGA+KG LQSLQQT++TFAGMVTVFC +LGWYNLEL++GQFQ RL FG+ REL DL RL LNGQRAR+L+ TVA LAN S +E IF +SPF+S KK E+E+E E A+R+E R W+TG++G T EAAQA++ EA+ ++Q++L G+ I W + + R+ Sbjct: 873 RSLAIHKRFYTSLILSDLVQEVPLGEVCHRYGANKGQLQSLQQTAATFAGMVTVFCARLGWYNLELILGQFQHRLTFGIQRELCDLVRLTLLNGQRARVLYDGGFHTVAALANASVSDVEKIFKKSSPFQSSKKLENETEWEAARRQESRCIWLTGRKGATEREAAQAIIQEAKSLIQQELGGLGIQWKTPDTRK 1067
BLAST of dna polymerase theta isoform x3 vs. nr
Match: gi|405950373|gb|EKC18366.1| (DNA polymerase theta [Crassostrea gigas]) HSP 1 Score: 233.417 bits (594), Expect = 5.228e-65 Identity = 111/195 (56.92%), Postives = 145/195 (74.36%), Query Frame = 0 Query: 29 RQMGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETVAILANCLPSAIETIFINASPFESEKKGESESEREVAKRREMRSFWVTGQRGLTIAEAAQAMVDEAREVLQKDL-GIRIDWNSNEDRQ 222 R + IH+RFYT+L L DLV E PL V +YGA+KG LQSLQQT++TFAGMVTVFC +LGWYNLEL++GQFQ RL FG+ REL DL RL LNGQRAR+L+ TVA LAN S +E IF +SPF+S KK E+E+E E A+R+E R W+TG++G T EAAQA++ EA+ ++Q++L G+ I W + + R+ Sbjct: 824 RSLAIHKRFYTSLILSDLVQEVPLGEVCHRYGANKGQLQSLQQTAATFAGMVTVFCARLGWYNLELILGQFQHRLTFGIQRELCDLVRLTLLNGQRARVLYDGGFHTVAALANASVSDVEKIFKKSSPFQSSKKLENETEWEAARRQESRCIWLTGRKGATEREAAQAIIQEAKSLIQQELGGLGIQWKTPDTRK 1018
BLAST of dna polymerase theta isoform x3 vs. nr
Match: gi|1274984399|gb|PIK33250.1| (hypothetical protein BSL78_29938 [Apostichopus japonicus]) HSP 1 Score: 222.246 bits (565), Expect = 7.624e-64 Identity = 112/220 (50.91%), Postives = 149/220 (67.73%), Query Frame = 0 Query: 1 MVVRSASSLVPDHWRSTPPTSNFSLGKARQ---MGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETVAILANCLPSAIETIFINASPFESEKKGESESEREVAKRREMRSFWVTGQRGLTIAEAAQAMVDEAREVLQKDLG-IRIDWN 216 ++R+A VP H ARQ + +H+RF+TAL L +LVNEAPL VA+KYG SKG LQSLQQ++STFAGMVTVFC KLGWYNLELL+ QFQ+RL FGV REL+DL R+ LN QRAR+L+ + + A +A P +E I NA PF+S ++ E + E A+RR R W +G++GLT AEAA+ +V EA+ +++ +LG I I+WN Sbjct: 109 FLIRAAKGNVPTH-------------TARQQHLLSVHRRFHTALILEELVNEAPLNQVARKYGCSKGQLQSLQQSASTFAGMVTVFCSKLGWYNLELLLAQFQNRLNFGVQRELVDLVRISLLNAQRARLLYNSGLTNPASVATASPREVERILRNAVPFKSGRQAVDEKDFEAAERRAARCIWASGKKGLTEAEAAELIVMEAKHIVRAELGSIGIEWN 315
BLAST of dna polymerase theta isoform x3 vs. nr
Match: gi|780161635|ref|XP_011683186.1| (PREDICTED: uncharacterized protein LOC583312 [Strongylocentrotus purpuratus]) HSP 1 Score: 224.942 bits (572), Expect = 4.126e-62 Identity = 117/280 (41.79%), Postives = 168/280 (60.00%), Query Frame = 0 Query: 29 RQMGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETVAILANCLPSAIETIFINASPFESEKKGESESEREVAKRREMRSFWVTGQRGLTIAEAAQAMVDEAREVLQKDLGI-RIDWNSNEDRQRNLSIIINESESKKKEMRPKSRKTRNSGGKKT----NTPETSARVYSKKPVLVLSPHLSSLGME--SSAHKRRSLEMSNSNGEPL 301 + + IH+RFYT L LH+LVNE PL VA KY G LQSLQQ++STF+GMVTVFC +LGW+NLELL+ QF++RL FG+ REL DL R+ LN QRAR+L+ TVA +A C P +ET+ N+ PF+S ++ E E +R++ R W TG++GLT AEAA+ +V EAR+++Q +LG+ + W E++ ++++ ++M K ++GG+KT + P AR K P G+E S R M + NG P+ Sbjct: 1705 KSIAIHRRFYTTLILHELVNEVPLPTVAAKYSCGFGQLQSLQQSASTFSGMVTVFCSRLGWWNLELLLAQFKNRLNFGIQRELCDLVRISLLNAQRARLLYDAGYPTVAAVATCNPDDVETLLRNSVPFKSGRQAHGEDAYEAVERKQTRCIWATGRKGLTEAEAAKLIVSEARQIVQVELGVADVAWGKEEEKDD------TKADNVGQKMVAKDNTKADNGGQKTVANDDGPREGARDGDKGP---------EAGLEHVSEGSDRSGNIMISCNGNPI 1969
BLAST of dna polymerase theta isoform x3 vs. nr
Match: gi|1126175383|ref|XP_019619912.1| (PREDICTED: DNA polymerase theta-like [Branchiostoma belcheri]) HSP 1 Score: 222.631 bits (566), Expect = 2.507e-61 Identity = 110/220 (50.00%), Postives = 150/220 (68.18%), Query Frame = 0 Query: 29 RQMGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETVAILANCLPSAIETIFINASPFESEKKGESESEREVAKRREMRSFWVTGQRGLTIAEAAQAMVDEAREVLQKDLGIR-IDW----NSNEDR---QRNLSIIINESESKKKEMR 240 RQ+ +H+RFYTAL L DL E PL VV +KY +KG+LQSLQQ+++TFAGMVTVFC +LGW+NLELL+ QFQ RL FGV REL++L R+ LNG RAR L TVA+LA +E + NA+PF+S +K + E+E E +R R FWVTG+ GLT AEAA+ ++ EA+E++Q+D + IDW +S ED+ +RN + + SE K ++ Sbjct: 782 RQLAVHKRFYTALVLQDLTQEVPLPVVVKKYSCTKGVLQSLQQSAATFAGMVTVFCSRLGWHNLELLLAQFQSRLTFGVQRELVELVRISLLNGLRARTLFNAGFHTVAMLAAAEVRDVEVVLRNAAPFKSGRKADDETEYEAKERETSRCFWVTGKAGLTEAEAARQIIQEAKELVQQDAALMGIDWQPPVSSEEDKDSLRRNSGVKPHPSEEDKNNLQ 1001
BLAST of dna polymerase theta isoform x3 vs. nr
Match: gi|1275001254|gb|PIK47986.1| (hypothetical protein BSL78_15134 [Apostichopus japonicus]) HSP 1 Score: 213.001 bits (541), Expect = 2.764e-61 Identity = 106/211 (50.24%), Postives = 143/211 (67.77%), Query Frame = 0 Query: 1 MVVRSASSLVPDHWRSTPPTSNFSLGKARQ---MGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETVAILANCLPSAIETIFINASPFESEKKGESESEREVAKRREMRSFWVTGQRGLTIAEAAQAMVDEAREVLQKD 208 ++R+A +P H ARQ + +H+RF+TAL L +LVNEAPL VA+KYG SKG LQSLQQ++STFAGMVTVFC KLGWYNLELL+ QFQ+RL FGV REL+DL R+ LN QRAR+L+ + + A +A P +E I NA PF+S ++ E + E A+RR R W +G++GLT AEAA+ +V EA+++++ D Sbjct: 284 FLIRAAKGNIPTH-------------TARQHHLLSVHRRFHTALILEELVNEAPLNQVARKYGCSKGQLQSLQQSASTFAGMVTVFCSKLGWYNLELLLAQFQNRLNFGVQRELVDLVRISLLNAQRARLLYNSGLTNPASVATASPREVERILRNAVPFKSGRQAVDEKDFEAAERRAARCIWASGKKGLTEAEAAELIVMEAKQIVRAD 481
BLAST of dna polymerase theta isoform x3 vs. nr
Match: gi|1316144691|ref|XP_023217378.1| (DNA polymerase theta-like [Centruroides sculpturatus]) HSP 1 Score: 221.476 bits (563), Expect = 2.898e-61 Identity = 104/192 (54.17%), Postives = 136/192 (70.83%), Query Frame = 0 Query: 27 KARQMGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETVAILANCLPSAIETIFINASPFESEKKGESESEREVAKRREMRSFWVTGQRGLTIAEAAQAMVDEAREVLQKDLGIRI-DWNS 217 +A+++ IHQRFY ALAL+DL+NE P+ VA KY +GMLQS QQ +STFAGMVT+FC +LGW N+ELLI QFQ RL FG+ EL DL RL +LN RAR + E+V+ LA + IE I N+ PF+S K ESE+E E+ KR + W+TGQ+G+T EAA+ +++EAR+V+Q DLGI I DWN Sbjct: 715 QAQKLAIHQRFYVALALNDLINEIPIATVANKYDFPRGMLQSFQQNASTFAGMVTIFCNRLGWTNMELLIKQFQKRLHFGIQHELCDLVRLNSLNANRARAFFDSGFESVSSLATANVNEIEMILKNSVPFQSAKPEESETEYELKKRHQAHVIWITGQKGVTEKEAAKMIIEEARQVVQLDLGIEIKDWND 906
BLAST of dna polymerase theta isoform x3 vs. nr
Match: gi|1351489050|ref|XP_023930117.1| (DNA polymerase theta [Lingula anatina]) HSP 1 Score: 222.246 bits (565), Expect = 4.231e-61 Identity = 117/255 (45.88%), Postives = 172/255 (67.45%), Query Frame = 0 Query: 21 SNFSLGKARQMGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETVAILANCLPSAIETIFINASPFESEKKGESESEREVAKRREMRSFWVTGQRGLTIAEAAQAMVDEAREVLQKDLGIR-IDWN-SNEDRQRNLSIIINESESKKKEMRPKSR--KTRNSGGKKTNTPETSARVYSKKPVLV 271 S S+ +A+ M +H RFYTAL LHDLVNE PL VVAQ Y ++KG+LQSLQQ+++TFAGMVTVFC +LGW NLELL+ QFQ+RL FG+ R+L DL R+ LNGQRAR+L+ ++VA LAN P+ +E NA PF+S+KK + E+E E+ +R + R W+TG++GLT EAA +V+EA+ +L++DL + + W S++ ++ + IN S+ + + ++ R T S G + + + + + VLV Sbjct: 894 SKSSVQQAKAMAVHSRFYTALMLHDLVNEVPLNVVAQCYNSTKGILQSLQQSAATFAGMVTVFCHRLGWINLELLLSQFQNRLTFGIQRDLCDLVRISLLNGQRARVLYNAGHQSVAALANADPAEVEQTLKNAVPFQSKKKADGENEWEMKERLKRRCIWLTGKKGLTEHEAAVLIVEEAQLLLKEDLALLGVAWKPSSQSSEQQMDTSINTSKDRSEALQCSHRTPATDRSNGPQNTSVQNDKEIVTPVRVLV 1148
BLAST of dna polymerase theta isoform x3 vs. nr
Match: gi|697834199|ref|XP_009637453.1| (PREDICTED: DNA polymerase theta [Egretta garzetta]) HSP 1 Score: 221.09 bits (562), Expect = 9.978e-61 Identity = 133/311 (42.77%), Postives = 186/311 (59.81%), Query Frame = 0 Query: 29 RQMGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETVAILANCLPSAIETIFINASPFESEKKGESESEREVAKRREMRSFWVTGQRGLTIAEAAQAMVDEAREVLQKDLGIR-IDWNSNEDRQRNLSIIINESESKKKEMRPKSRKTRNSGGKKTNTPETSARVYSKKPVLVLSPHLSSLGMESS-------AHKRRSLEMSNSNGEPLKLPKVTRTEASRSEFCSTPVASTAKMRTGN 331 RQM IH+RF+T+LAL DL++E PLK + +KYG S+G LQSLQQ+++T+AGMVTVFC++LGW+N+ELL+ QFQ RL FGVHREL DL R+ LN QRAR+L+ TVA LA P + T N+ PF+S ++ E E +RR +RS W+ G +GLT EAA +V+EAR +LQ+DL + + WN + + S +I+ SES+ ++ R R++G + +P RV +KK V H + LG ++ +KRR +S S TE SR E C P A+ GN Sbjct: 689 RQMAIHKRFFTSLALVDLISEVPLKDMTKKYGCSRGQLQSLQQSAATYAGMVTVFCKRLGWHNMELLLSQFQSRLTFGVHRELCDLVRVSLLNAQRARMLYNAGFVTVADLAKASPDDVATALKNSVPFKSVRRAVDEDEESAEERRTVRSLWMAGMKGLTEREAASLIVEEARGLLQQDLALMGVQWNPESFLESDTSSMIS-SESELED-----RLRRSNGELSSESP----RVLNKKGCRV--QHCNGLGSQTGNLSNIKKGYKRR---LSGS------------TENSRFE-CEVPGRREARAEEGN 971
BLAST of dna polymerase theta isoform x3 vs. nr
Match: gi|676463613|ref|XP_009056652.1| (hypothetical protein LOTGIDRAFT_120568 [Lottia gigantea] >gi|556103855|gb|ESO92507.1| hypothetical protein LOTGIDRAFT_120568 [Lottia gigantea]) HSP 1 Score: 220.32 bits (560), Expect = 1.658e-60 Identity = 103/188 (54.79%), Postives = 137/188 (72.87%), Query Frame = 0 Query: 29 RQMGIHQRFYTALALHDLVNEAPLKVVAQKYGASKGMLQSLQQTSSTFAGMVTVFCQKLGWYNLELLIGQFQDRLQFGVHRELIDLCRLGTLNGQRARILHRTKVETVAILANCLPSAIETIFINASPFESEKKGESESEREVAKRREMRSFWVTGQRGLTIAEAAQAMVDEAREVLQKDL-GIRIDW 215 R + IH+RFYTAL LH+LVNE PL + +KY +KG L SLQQT++TFAGMVTVFC KLGW+NLEL++GQFQ+RL FGV REL DL R+ LN QRAR L+ +TVA LAN P+++E F+ + F+S K E ESE E KRR+ R ++ G++ +TI EAA +VDEA+ ++Q++L G+ I W Sbjct: 645 RAVAIHKRFYTALVLHELVNEKPLNDIIKKYHCNKGQLSSLQQTAATFAGMVTVFCGKLGWHNLELILGQFQNRLTFGVQRELCDLVRITALNAQRARCLYNDGYQTVASLANADPNSVENAFLQSMAFQSNKTQEGESEWEAEKRRQCRCIYLGGRKAVTIMEAAMTVVDEAKTIIQEELGGVGIQW 832 The following BLAST results are available for this feature:
BLAST of dna polymerase theta isoform x3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of dna polymerase theta isoform x3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 6
BLAST of dna polymerase theta isoform x3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold13_size735724:637953..648100+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold13_size735724-snap-gene-6.23 ID=maker-scaffold13_size735724-snap-gene-6.23|Name=dna polymerase theta isoform x3|organism=Tigriopus kingsejongensis|type=gene|length=10148bp|location=Sequence derived from alignment at scaffold13_size735724:637953..648100+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'dna polymerase theta isoform x3' has the following synonyms
Add to Basket
|