probable nuclear hormone receptor hr38-like, maker-scaffold1408_size42850-snap-gene-0.13 (gene) Tigriopus kingsejongensis

Overview


Name	probable nuclear hormone receptor hr38-like
Unique Name	maker-scaffold1408_size42850-snap-gene-0.13
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19")

HSP 1 Score: 69.3218 bits (168), Expect = 3.971e-13
Identity = 37/102 (36.27%), Postives = 58/102 (56.86%), Query Frame = 0

Query:   30 LCAVCGDNAACQ-HYGVRTCEGCKGFFKRTVQKNA--KYVCLAD-KNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSP 127
            LC +CG+ A    +YG + C  C+ FF+R+VQ N+  +++C +  K+C ++ + R  CQ CRFQKC++ GM    V  D  + RR +  S       +PP P
Sbjct:  106 LCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPD--RERRSK-KSAMTLNNNKPPLP 204

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BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22")

HSP 1 Score: 65.0846 bits (157), Expect = 8.402e-12
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 0

Query:   30 LCAVCGDNAACQ-HYGVRTCEGCKGFFKRTVQKNAK---YVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTD 104
            LC +CG+ A    +YG + C  C+ FF+R+VQ N+      C   ++C ++ + R  CQ CRFQKC++ GM    V  D
Sbjct:  105 LCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPD 183

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BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5")

HSP 1 Score: 60.8474 bits (146), Expect = 2.232e-10
Identity = 31/82 (37.80%), Postives = 41/82 (50.00%), Query Frame = 0

Query:   30 LCAVCGDNAA-CQHYGVRTCEGCKGFFKRTVQKNA--KYVCL-----ADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRT 103
            +C +CGD A    HYG   C  C+ FF RTV K    ++ C+         C + K  R  CQFCR++ CL+ GM    V T
Sbjct:  136 VCRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTT 217

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BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000011488 (supercontig:LSalAtl2s:LSalAtl2s794:281844:292908:-1 gene:EMLSAG00000011488 transcript:EMLSAT00000011488 description:"maker-LSalAtl2s794-snap-gene-2.22")

HSP 1 Score: 59.6918 bits (143), Expect = 3.583e-10
Identity = 76/366 (20.77%), Postives = 146/366 (39.89%), Query Frame = 0

Query:   65 YVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVV------RTDSLKGRRGRLPSKPRSPQEQPPSPPVS-----LITALVRAHIDTSPDSSPNSLDFSQYMEASVEELET-----KEGLVVN------------------EATKIQQFY-----HLLTSS---------IEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLA-YRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAM-------DLDIQAFACLCALTLVT-DRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQY------FSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMF 367
            YVC  + NC +D  RRN+CQ CRF+KCL V M KE V      R   +K  +    +      +   + P+S     L++   R       +SS   +    Y+  ++  L T     KE +V+N                    T   QFY      LL+ +         +  +  +   +P   +   +D+ +L + A   LF L  A + I  + ++             C+    D    +   ++ +  +       +LD   +  L AL L + + + L +  +VE LQ + +  L+++ ++N +   K +Y      F ++L   + +  ++ + ++ +F+ K   ++ V  +I   F
Sbjct:    4 YVCKGNGNCTIDVARRNQCQSCRFKKCLMVKMKKEAVQQERTPRISCIKATQTTSYTFSNLKNKSSKANPISSRRLYLLSTSFR-------ESSNTEIIDDTYLTKNI--LSTVVNSKKENIVINIENNKKCIETILNAPSHKRTTPSFQFYPSPTITLLSENSLHEISVKLLFTVVHWAKSVPSFVEFSVNDQNVLLREAWSRLFILGTAQWAILINEEKLML---------NCEEKSKDHTNLLFHHAKKMTKIVQKIRDQNLDYNEYTILKALILFSPEGNNLIESHQVEKLQDQTLIMLEEYCSHNDNRVNKPKYTFNLRRFGKLLLAFSNIFQITSKDVESLFFQKTLGSISVDRIITDSF 351

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BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000012964 (supercontig:LSalAtl2s:LSalAtl2s98:1204108:1205793:-1 gene:EMLSAG00000012964 transcript:EMLSAT00000012964 description:"snap_masked-LSalAtl2s98-processed-gene-12.16")

HSP 1 Score: 44.669 bits (104), Expect = 8.339e-7
Identity = 19/34 (55.88%), Postives = 22/34 (64.71%), Query Frame = 0

Query:   70 DKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRT 103
            +KNC V K  R  CQ+CRF KCL+VGM    V T
Sbjct:   14 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 47

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BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|17380507|sp|P10826.2|RARB_HUMAN (RecName: Full=Retinoic acid receptor beta; Short=RAR-beta; AltName: Full=HBV-activated protein; AltName: Full=Nuclear receptor subfamily 1 group B member 2; AltName: Full=RAR-epsilon)

HSP 1 Score: 200.29 bits (508), Expect = 8.238e-59
Identity = 118/343 (34.40%), Postives = 185/343 (53.94%), Query Frame = 0

Query:   31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVR-AHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHS-FGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLV-TDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASS 370
            C VC D ++  HYGV  CEGCKGFF+R++QKN  Y C  DKNC ++K  RNRCQ+CR QKC  VGM KE VR D  + ++ +  SK    +    +  +  +T  +R AH +T     P+     +Y   S  +   +  L + +     +F  L T  I  I +F  R+PG   +  +D+  L ++ACL++  LR+  R  P+ D  TF  GL L+R Q  ++ FG     +  F+  L  +++D      L A+ L+  DR  L +P +V+ LQ  ++ +LK ++     +  K   F +IL ++T LRS+S +G +R+  LKME    +P +I++M  +S
Sbjct:   88 CFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRND--RNKKKKETSKQECTESYEMTAELDDLTEKIRKAHQET----FPSLCQLGKYTTNSSADHRVRLDLGLWD-----KFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPS--KPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENS 417

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BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|1173170|sp|P18516.2|RARG_NOTVI (RecName: Full=Retinoic acid receptor gamma; Short=RAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group B member 3; AltName: Full=Retinoic acid receptor delta; Short=RAR-delta)

HSP 1 Score: 199.904 bits (507), Expect = 2.989e-58
Identity = 120/345 (34.78%), Postives = 180/345 (52.17%), Query Frame = 0

Query:   31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHS-FGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLV-TDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373
            C VC D ++  HYGV +CEGCKGFF+R++QKN  Y C  DKNC ++K  RNRCQ+CR QKC  VGM KE VR D  K ++           E PP    +LI  + +AH +T     P+     +Y   S  +   +  L +       +F  L T  I  I +F  R+PG   +  +D+  L ++ACL++  LR+  R  P+ D  TF  GL L+R Q  ++ FG     +  F+  L  +++D      L A+ L+  DR  L +P++V+ LQ  ++ +LK +         K   F R+L ++T LR +S +G +R   LKME   P+P +I +M  +   F
Sbjct:  143 CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKEIKEEVVTDSYEMPPEME-ALIQKVSKAHQET----FPSLCQLGKYTTNSSADHRVQLDLGL-----WHKFSELATKCIIKIVEFAKRLPGFATLTIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAEQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALKIYARRR--RPNKPYMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAF 475

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BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|28558767|sp|P28699.2|RARG_XENLA (RecName: Full=Retinoic acid receptor gamma; Short=RAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group B member 3)

HSP 1 Score: 199.134 bits (505), Expect = 3.314e-58
Identity = 125/351 (35.61%), Postives = 183/351 (52.14%), Query Frame = 0

Query:   31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGR-----LPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHS-FGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLV-TDRHGLSDPKRVENLQSKVINSLKDHV-TYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373
            C VC D ++  HYGV +CEGCKGFF+R++QKN  Y C  DKNC ++K  RNRCQFCR QKC  VGM KE VR D  K ++       LP     P E        LI  + +AH +T     P+     +Y   S  +   +  L + +     +F  L T  I  I +F  R+PG   +  +D+  L +SACL++  LR+  R  P+ D  TF  GL L+R Q  ++ FG     +  F+  L  +++D      L A+ L+  DR  L +P++VE LQ  ++ +LK +     PD   K   F R+L ++T LR +S +G +R   LK+E   P+P +I +M  +   F
Sbjct:  110 CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQINKVTRNRCQFCRLQKCFQVGMSKEAVRNDRNKKKKEIKEEVVLPDSYEMPPEME-----ELIQKVSKAHQET----FPSLCQLGKYTTNSSADQRVQLDLGLWD-----KFSELSTKCIIKIVEFAKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFSFADQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVEKLQEPLLEALKFYARRRRPD---KPYMFPRMLMKITDLRGISTKGAERAITLKLEIPGPMPPLIREMLENPEAF 443

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BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|133498|sp|P13631.1|RARG_HUMAN (RecName: Full=Retinoic acid receptor gamma; Short=RAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group B member 3)

HSP 1 Score: 196.052 bits (497), Expect = 2.867e-57
Identity = 119/340 (35.00%), Postives = 184/340 (54.12%), Query Frame = 0

Query:   31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPV-SLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHS-FGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLV-TDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMF 367
            C VC D ++  HYGV +CEGCKGFF+R++QKN  Y C  DKNC ++K  RNRCQ+CR QKC  VGM KE VR D  + ++ +   +  SP     SP +  LIT + +AH +T     P+     +Y   S  +   +  L + +     +F  L T  I  I +F  R+PG   +  +D+  L ++ACL++  LR+  R  P+ D  TF  GL L+R Q  ++ FG     +  F+  L  +++D      L A+ L+  DR  L +P++V+ LQ  ++ +L+ +      +Q     F R+L ++T LR +S +G +R   LKME   P+P +I +M 
Sbjct:   90 CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRND--RNKKKKEVKEEGSPDSYELSPQLEELITKVSKAHQET----FPSLCQLGKYTTNSSADHRVQLDLGLWD-----KFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQP--YMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREML 416

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BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|166899090|sp|P18911.3|RARG_MOUSE (RecName: Full=Retinoic acid receptor gamma; Short=RAR-gamma; AltName: Full=Nuclear receptor subfamily 1 group B member 3)

HSP 1 Score: 196.052 bits (497), Expect = 3.600e-57
Identity = 119/340 (35.00%), Postives = 184/340 (54.12%), Query Frame = 0

Query:   31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPV-SLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHS-FGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLV-TDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMF 367
            C VC D ++  HYGV +CEGCKGFF+R++QKN  Y C  DKNC ++K  RNRCQ+CR QKC  VGM KE VR D  + ++ +   +  SP     SP +  LIT + +AH +T     P+     +Y   S  +   +  L + +     +F  L T  I  I +F  R+PG   +  +D+  L ++ACL++  LR+  R  P+ D  TF  GL L+R Q  ++ FG     +  F+  L  +++D      L A+ L+  DR  L +P++V+ LQ  ++ +L+ +      +Q     F R+L ++T LR +S +G +R   LKME   P+P +I +M 
Sbjct:   90 CFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCIINKVTRNRCQYCRLQKCFEVGMSKEAVRND--RNKKKKEVKEEGSPDSYELSPQLEELITKVSKAHQET----FPSLCQLGKYTTNSSADHRVQLDLGLWD-----KFSELATKCIIKIVEFAKRLPGFTGLSIADQITLLKAACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALRLYARRRRPSQP--YMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREML 416

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BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|657600386|gb|AID52854.1| (hormone receptor 38 [Tigriopus japonicus])

HSP 1 Score: 663.685 bits (1711), Expect = 0.000e+0
Identity = 340/373 (91.15%), Postives = 360/373 (96.51%), Query Frame = 0

Query:    1 LSKMRLPLGPPPPPLTRSPASGDLKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373
            LSKMRLPLGPPPPPLTRSP  GD K+ SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLD+SQY++ASVEELETKEGLV NEA KIQQFYHLLTSSIEVIRKFCDRIPGIN+++ SDRE LFQS CLELF LRLAYRIQPDSDQFTFC+G+VLHRNQCQHSFG+WLG+I+EFSRTLHAM+LDIQAF+CLCALTLV +RHG+SDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRIL+RL+PLRSLSVQGLQRIFYLKMED VPVP +IEK+FASSIPF
Sbjct:  218 LSKMRLPLGPPPPPLTRSPG-GDPKSGSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDYSQYVDASVEELETKEGLVANEAAKIQQFYHLLTSSIEVIRKFCDRIPGINELVPSDREHLFQSTCLELFVLRLAYRIQPDSDQFTFCNGMVLHRNQCQHSFGEWLGTIVEFSRTLHAMELDIQAFSCLCALTLVNERHGVSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILDRLSPLRSLSVQGLQRIFYLKMEDQVPVPDLIEKLFASSIPF 589

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BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1042761287|gb|ANQ45198.1| (hormone receptor 38 [Lepeophtheirus salmonis salmonis])

HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0
Identity = 267/347 (76.95%), Postives = 311/347 (89.63%), Query Frame = 0

Query:   28 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVE-ELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373
            SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SP E PPSPPVSLITALVRAHIDTSPD   N+LD+SQ++E S+E E ++KE ++ NEA KI QFYH+LTSSIEVIR FC+RIPGI+++  +DR+LLFQ++CLELF LRLAYR  PDSD++TFC+G+VLH +QC+ +FGDWL  I EF+R LH+M+LDI AF+CLC L LV +RHGLSDPK+VE++++K+INSLKDHVTYNP+AQKK+ Y +RIL+RL  LRSLS+QGLQRIF+LK ED VP P +IEKMFASSIPF
Sbjct:  406 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPTESPPSPPVSLITALVRAHIDTSPDM--NNLDYSQFVETSIEDERDSKENMLANEAIKIGQFYHVLTSSIEVIRNFCERIPGISELSLNDRDLLFQTSCLELFVLRLAYRSNPDSDRYTFCNGVVLHVSQCEQTFGDWLNGINEFARGLHSMELDISAFSCLCGLILVNERHGLSDPKKVESIENKIINSLKDHVTYNPEAQKKEHYMTRILDRLPALRSLSMQGLQRIFFLKWEDLVPAPPLIEKMFASSIPF 750

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BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1036837|gb|AAC46926.1| (DHR38, partial [Drosophila melanogaster])

HSP 1 Score: 494.967 bits (1273), Expect = 3.807e-170
Identity = 249/350 (71.14%), Postives = 291/350 (83.14%), Query Frame = 0

Query:   24 LKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373
            L+A S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADKNCPVDKRRRNRCQFCRFQKCL VGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPP+SLITALVR+H+DT+PD  P+ LD+S Y E S+           +EA K+QQFY LLTSS++VI++F ++IPG  D+L  D+ELLFQSA LELF LRLAYR + D  +  FC+G VLHR QC  SFG+WL  IMEFSR+LH +++DI AFACLCALTL+T+RHGL +PK+VE LQ K+I SL+DHVTYN +AQKKQ YFSR+L +L  LRSLSVQGLQRIFYLK+ED VP PA+IE MF +++PF
Sbjct:  210 LQAPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITALVRSHVDTTPD--PSCLDYSHYEEQSM-----------SEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNGTVLHRTQCLRSFGEWLNDIMEFSRSLHNLEIDISAFACLCALTLITERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTTLPF 546

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BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|158296777|ref|XP_317123.4| (AGAP008334-PA, partial [Anopheles gambiae str. PEST] >gi|157014874|gb|EAA12420.4| AGAP008334-PA, partial [Anopheles gambiae str. PEST])

HSP 1 Score: 501.516 bits (1290), Expect = 4.875e-170
Identity = 249/346 (71.97%), Postives = 293/346 (84.68%), Query Frame = 0

Query:   28 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373
            S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADK CPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPPVS+ITALVRAH+DT+PD +  SLD+SQY E    E       ++ EA K+QQFY+LLT+S++VI+ F D++PG ND+   D+ELLFQSA LELF LRL+YR + D  + TFC+G+VLHR+QCQ SFGDWL +I+EFS++LHAM +DI AFACLCALTLVT+RHGL +PK+VE LQ K+I+SL+DHVTYN +AQ+K  YFSR+L +L  LRSLSVQGLQRIFYLK+ED VP P +IE MF +S+PF
Sbjct:  395 SQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSMITALVRAHVDTTPDLA--SLDYSQYREPGQNEP------IITEAEKVQQFYNLLTTSVDVIKHFADKLPGYNDLSVEDQELLFQSASLELFVLRLSYRARSDDTKMTFCNGVVLHRHQCQRSFGDWLNAILEFSKSLHAMQIDISAFACLCALTLVTERHGLREPKKVEQLQMKIISSLRDHVTYNSEAQRKPHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPPLIENMFLASLPF 732

[Close]

BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|2133651|pir||S58238 (DHR38 protein - fruit fly (Drosophila melanogaster) >gi|929562|emb|CAA61534.1| DHR38 [Drosophila melanogaster])

HSP 1 Score: 494.582 bits (1272), Expect = 6.304e-170
Identity = 249/350 (71.14%), Postives = 291/350 (83.14%), Query Frame = 0

Query:   24 LKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373
            L+A S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADKNCPVDKRRRNRCQFCRFQKCL VGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPP+SLITALVR+H+DT+PD  P+ LD+S Y E S+           +EA K+QQFY LLTSS++VI++F ++IPG  D+L  D+ELLFQSA LELF LRLAYR + D  +  FC+G VLHR QC  SFG+WL  IMEFSR+LH +++DI AFACLCALTL+T+RHGL +PK+VE LQ K+I SL+DHVTYN +AQKKQ YFSR+L +L  LRSLSVQGLQRIFYLK+ED VP PA+IE MF +++PF
Sbjct:  215 LQAPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITALVRSHVDTTPD--PSCLDYSHYEEQSM-----------SEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNGTVLHRTQCLRSFGEWLNDIMEFSRSLHNLEIDISAFACLCALTLITERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTTLPF 551

[Close]

BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|194192070|gb|EDX05646.1| (GD21688 [Drosophila simulans])

HSP 1 Score: 494.582 bits (1272), Expect = 7.203e-170
Identity = 249/350 (71.14%), Postives = 291/350 (83.14%), Query Frame = 0

Query:   24 LKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373
            L+A S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADKNCPVDKRRRNRCQFCRFQKCL VGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPP+SLITALVR+H+DT+PD  P+ LD+S Y E S+           +EA K+QQFY LLTSS++VI++F ++IPG  D+L  D+ELLFQSA LELF LRLAYR + D  +  FC+G VLHR QC  SFG+WL  IMEFSR+LH +++DI AFACLCALTL+T+RHGL +PK+VE LQ K+I SL+DHVTYN +AQKKQ YFSR+L +L  LRSLSVQGLQRIFYLK+ED VP PA+IE MF +++PF
Sbjct:  220 LQAPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITALVRSHVDTTPD--PSCLDYSHYEEQSM-----------SEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNGTVLHRTQCLRSFGEWLNDIMEFSRSLHNLEIDISAFACLCALTLITERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTTLPF 556

[Close]

BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1135078485|ref|XP_019892054.1| (PREDICTED: probable nuclear hormone receptor HR38 [Musca domestica])

HSP 1 Score: 507.294 bits (1305), Expect = 8.056e-170
Identity = 250/346 (72.25%), Postives = 297/346 (85.84%), Query Frame = 0

Query:   28 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373
            S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPPVSLITALVR+H+DT+PD  P+ LD+SQY E    +L     LV++EA K+QQFY+LLT+S++VI++F ++IPG +D+   D+ELL QSA LELF LRL+YR + D  + TFC+G+VLHR+QCQ SFGDWL  I+EFS++LH++++DI AFACLCALTL+TDRHGL +PK+VE LQ K+I SL+DHVTYN +AQKK  YFSR+L +L  LRSLSVQGLQRIFYLK+ED VP PA+IE MF +S+PF
Sbjct:  598 SQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALVRSHVDTTPD--PSCLDYSQYREPGQADLP----LVMSEAEKVQQFYNLLTTSVDVIKQFAEKIPGYSDLTQEDQELLLQSASLELFVLRLSYRARVDDTKMTFCNGIVLHRSQCQRSFGDWLNGILEFSKSLHSLEIDISAFACLCALTLITDRHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKPHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVASLPF 937

[Close]

BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1279748360|ref|XP_022919139.1| (probable nuclear hormone receptor HR38 isoform X1 [Onthophagus taurus])

HSP 1 Score: 496.508 bits (1277), Expect = 8.804e-170
Identity = 255/367 (69.48%), Postives = 297/367 (80.93%), Query Frame = 0

Query:    7 PLGPPPPPLTRSPASGDLKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373
            P GP PP            + S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADK CPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPPVSLITALVRAH+DT+PD +  +LD+SQY E S  E       +++EA KIQQFY LLT+S++VIR F ++IPG  D+   D+ELLFQSA LELF LRLAYR  P+  + TFC+G+VL + QCQ SFGDWL +IMEF  +LH+M++DI AFACLCAL LVTDRHGL +P RVE LQ K+I+SLKDHVTYN +AQ+KQ YFSR+L +L  LRSLS+QGLQRIFYLK+ED VP P +IE+MFA+++PF
Sbjct:  261 PKGPTPP------------SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALVRAHVDTTPDLA--NLDYSQYCEPSPIEP------MISEAEKIQQFYTLLTTSVDVIRNFAEKIPGFQDLCPEDKELLFQSASLELFVLRLAYRTHPNDTKLTFCNGVVLDKQQCQRSFGDWLHTIMEFCNSLHSMEIDISAFACLCALDLVTDRHGLKEPSRVEQLQMKIISSLKDHVTYNAEAQRKQHYFSRLLGKLPELRSLSIQGLQRIFYLKLEDLVPAPPLIERMFAATLPF 607

[Close]

BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1279748362|ref|XP_022919140.1| (probable nuclear hormone receptor HR38 isoform X2 [Onthophagus taurus])

HSP 1 Score: 496.123 bits (1276), Expect = 8.907e-170
Identity = 255/367 (69.48%), Postives = 297/367 (80.93%), Query Frame = 0

Query:    7 PLGPPPPPLTRSPASGDLKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373
            P GP PP            + S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADK CPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPPVSLITALVRAH+DT+PD +  +LD+SQY E S  E       +++EA KIQQFY LLT+S++VIR F ++IPG  D+   D+ELLFQSA LELF LRLAYR  P+  + TFC+G+VL + QCQ SFGDWL +IMEF  +LH+M++DI AFACLCAL LVTDRHGL +P RVE LQ K+I+SLKDHVTYN +AQ+KQ YFSR+L +L  LRSLS+QGLQRIFYLK+ED VP P +IE+MFA+++PF
Sbjct:  258 PKGPTPP------------SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALVRAHVDTTPDLA--NLDYSQYCEPSPIEP------MISEAEKIQQFYTLLTTSVDVIRNFAEKIPGFQDLCPEDKELLFQSASLELFVLRLAYRTHPNDTKLTFCNGVVLDKQQCQRSFGDWLHTIMEFCNSLHSMEIDISAFACLCALDLVTDRHGLKEPSRVEQLQMKIISSLKDHVTYNAEAQRKQHYFSRLLGKLPELRSLSIQGLQRIFYLKLEDLVPAPPLIERMFAATLPF 604

[Close]

BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1321295962|ref|XP_023308563.1| (probable nuclear hormone receptor HR38 [Lucilia cuprina])

HSP 1 Score: 504.597 bits (1298), Expect = 3.183e-169
Identity = 250/346 (72.25%), Postives = 296/346 (85.55%), Query Frame = 0

Query:   28 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373
            S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPPVSLITALVR+H+DT+PD  P+ LD+SQY E S    +    +V++EA K+QQFY+LLT+S++VI++F ++IPG  D+ A D+ELL QSA LELF LRL+YR + D  + TFC+G+VLHR+QCQ SFGDWL  I+EFS++LH +++DI AFACLCALTLVT+RHGL +PK+VE LQ K+I SL+DHVTYN +AQKK  YFSR+L +L  LRSLSVQGLQRIFYLK+ED VP PA+IE MF +S+PF
Sbjct:  557 SQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALVRSHVDTTPD--PSCLDYSQYREPS----QAASPVVMSEAEKVQQFYNLLTTSVDVIKQFAEKIPGYLDLTAEDQELLLQSASLELFVLRLSYRARVDDTKMTFCNGIVLHRSQCQRSFGDWLNGILEFSKSLHNLEIDISAFACLCALTLVTERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKPHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVASLPF 896

The following BLAST results are available for this feature:

BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
BLAST of probable nuclear hormone receptor hr38-like vs. nr

BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 25


Match Name	E-value	Identity	Description
EMLSAG00000010267	3.971e-13	36.27	supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1...	[more]
EMLSAG00000011907	8.402e-12	37.97	supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1...	[more]
EMLSAG00000004174	2.232e-10	37.80	supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-...	[more]
EMLSAG00000011488	3.583e-10	20.77	supercontig:LSalAtl2s:LSalAtl2s794:281844:292908:-...	[more]
EMLSAG00000012964	8.339e-7	55.88	supercontig:LSalAtl2s:LSalAtl2s98:1204108:1205793:...	[more]

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BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|17380507\|sp\|P10826.2\|RARB_HUMAN	8.238e-59	34.40	RecName: Full=Retinoic acid receptor beta; Short=R...	[more]
gi\|1173170\|sp\|P18516.2\|RARG_NOTVI	2.989e-58	34.78	RecName: Full=Retinoic acid receptor gamma; Short=...	[more]
gi\|28558767\|sp\|P28699.2\|RARG_XENLA	3.314e-58	35.61	RecName: Full=Retinoic acid receptor gamma; Short=...	[more]
gi\|133498\|sp\|P13631.1\|RARG_HUMAN	2.867e-57	35.00	RecName: Full=Retinoic acid receptor gamma; Short=...	[more]
gi\|166899090\|sp\|P18911.3\|RARG_MOUSE	3.600e-57	35.00	RecName: Full=Retinoic acid receptor gamma; Short=...	[more]

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BLAST of probable nuclear hormone receptor hr38-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|657600386\|gb\|AID52854.1\|	0.000e+0	91.15	hormone receptor 38 [Tigriopus japonicus]	[more]
gi\|1042761287\|gb\|ANQ45198.1\|	0.000e+0	76.95	hormone receptor 38 [Lepeophtheirus salmonis salmo...	[more]
gi\|1036837\|gb\|AAC46926.1\|	3.807e-170	71.14	DHR38, partial [Drosophila melanogaster]	[more]
gi\|158296777\|ref\|XP_317123.4\|	4.875e-170	71.97	AGAP008334-PA, partial [Anopheles gambiae str. PES...	[more]
gi\|2133651\|pir\|\|S58238	6.304e-170	71.14	DHR38 protein - fruit fly (Drosophila melanogaster...	[more]
gi\|194192070\|gb\|EDX05646.1\|	7.203e-170	71.14	GD21688 [Drosophila simulans]	[more]
gi\|1135078485\|ref\|XP_019892054.1\|	8.056e-170	72.25	PREDICTED: probable nuclear hormone receptor HR38 ...	[more]
gi\|1279748360\|ref\|XP_022919139.1\|	8.804e-170	69.48	probable nuclear hormone receptor HR38 isoform X1 ...	[more]
gi\|1279748362\|ref\|XP_022919140.1\|	8.907e-170	69.48	probable nuclear hormone receptor HR38 isoform X2 ...	[more]
gi\|1321295962\|ref\|XP_023308563.1\|	3.183e-169	72.25	probable nuclear hormone receptor HR38 [Lucilia cu...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold1408_size42850	supercontig	scaffold1408_size42850:31813..37733 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold1408_size42850-snap-gene-0.13-mRNA-1	maker-scaffold1408_size42850-snap-gene-0.13-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold1408_size42850:31813..37733-

gene from alignment at scaffold1408_size42850:31813..37733-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold1408_size42850-snap-gene-0.13 ID=maker-scaffold1408_size42850-snap-gene-0.13|Name=probable nuclear hormone receptor hr38-like|organism=Tigriopus kingsejongensis|type=gene|length=5921bp|location=Sequence derived from alignment at scaffold1408_size42850:31813..37733- (Tigriopus kingsejongensis)
CGATCTGTCCAAGATGCGCCTCCCCCTGGGACCACCACCTCCCCCTCTCA
CCCGATCTCCGGCTTCAGGCGACCTCAAGGCCACCTCGCTCTTGTGTGCG
GTCTGCGGGGACAATGCCGCCTGTCAGCACTATGGAGTGCGAACCTGTGA
GGGTTGCAAGGGCTTTTTCAAGCGTACGGTTCAGAAGAATGCCAAATATG
TGTGTCTCGCCGACAAGAATTGTCCCGTGGACAAACGGCGCCGGAACCGC
TGCCAGTTTTGTCGGTTCCAGAAATGCTTGGCCGTGGGCATGGTGAAGGA
GGTGGTTCGCACCGACAGCCTCAAGGGTCGGCGAGGCCGGTTACCCTCGA
AGCCTCGAAGCCCTCAGGAGCAGCCGCCCTCGCCGCCCGTGAGCCTGATA
ACGGCTCTCGTGCGAGCTCACATAGACACATCACCTGATTCATCTCCCAA
TAGCCTGGACTTTTCACAGGTAAGACACACGTCAACCTTTGTCAAAATAA
AACGAAGCGTCTGCATATAAATCTCGCTGATCAGGGCTGATGGATTGTTT
GTCAATACAGACAGCCATATTTAAAGGTCTATGAGACATTTAGGACCAAT
TAGCCGACCGCATGAACCATCCAGTGTGTGTGGAGATTAGACACTGCCTC
AAAACAGAATATGCGATCCAATTTAGGCCGTATTTAAGTTAAAGACGACG
GAGCATACATGTACCCCGGTAAACCTTGGAACGACGAGCTCCACTTCCCC
AACCACATGATCATGACAATGAGTACCGAGCCCATCGCTCCTCTCTCTCT
CTCTTTTGCCCCAAATTTAGATGTTCCGCAAGTTCAGACAATGGATTTGG
CTGCATTGCGGAGATGATGATAAATCACGATATAATGCGTGCCGCTTGGG
TTGGTGTTAAAGTTTCAGTTCATTGAAGTCGTGTTTAGATCCGTGGAGGA
TACTTTTGCGTAGCTCCGTAAAAAAGCGTCCACCCTATCGTTTACCCGAT
GCAAAAAGTACGACTCCACAACGCTACGGAGTAAACAGGACTATTAGCTG
CCTGCCCCGATTGTGCTTCCCATGTTCCCATGGCAATCCAAGCGGGCAAT
TACTCTGATACTTTCAATTTGAACCCCAATTGCCTCGACAGTGCAGCGAG
TGTTCGTTCAGGGCGACAACTTCCCAGGGCAGCAGAGCTTTGTTCAGCGA
GGACAGTATTAGGGGATAAATGTTACTAATCACCCTTGGCCAGGTGGTGT
GGCGAGATAAATGTGCTAATTGACCCCCCTCAACTCGTTGCAGTACATGG
AGGCCTCCGTGGAGGAGCTGGAAACCAAAGAGGGTCTAGTGGTCAACGAG
GCCACCAAGATCCAGCAATTCTACCACCTACTCACCTCATCCATCGAGGT
CATCCGGAAGTTCTGCGATCGCATCCCTGGGATCAACGACATCTTGGCCT
CGGACCGGGAGCTCCTGTTCCAATCCGCCTGCTTGGAACTCTTCGCCCTT
CGCTTGGCTTACCGGTAAGACCGAAATCTACCTCGCCTCCAGTCCACCCA
TTCGCTCTCACCTTCGCACGTCGTGAAGTCCCCGTGATGGCCCAAAATGG
TCTCATGCTCGAGAGAAATGCCAAACAAGGCTTTGAATTATGCCAGACTC
TATCATCTGCGCAGGACCGTTGAGCGAGATCACGAAATTTCGCTCAATTT
TGACAGGTTCAAGTGGGAAAAATCGTACAAGCATGAGGAGTGGGGATAGT
TGGATGCCTGACTGGGGAGATGGATAGATGGTGGATGCTTGGCTGGATCA
GGAGACTGCTGACTGCCGGCTAAATGGCCAAGGTTTCGCAAAAAAGTGTC
TCAATTCTCCGAAACAACATGATCATCCATCCAGGTGACGACGCGTTGAC
TCCACCATTAGGCTTCTTCAAATCTATTTTCGAGCCCACATCCAATAATA
ATAGCGACACGCCACCATCATGAATGGGAACGTATCCGATATCCCCCCCG
TTAGACTCGGTATTACACGGGAGCAGCCTTTTTTTTGGGGGGGGGGGCGG
CTACTAACTTCCAGTACATTTCTCCACCTCTTCAATGCCTGACTAAACGT
TTTTCTGCTTTGAGAAGATGGCAATTCAGGTTGGGAATTAAATTGATGAC
CAAAGTCAAGAGTAAAACACTGTTACGAGCACTGCACGGCGAGAGCTGAA
CTCCATTTTTGGGGAGCGGCGTAGGTACGTAAGAGTTGGAGTACCATTAA
GTGAAGTTTTATTCGAGTCAGCCGTGTTTTGAGCGAGTGGGATCACTTCA
ACCATTGTGCTGTAGTGGTTAGAGTAAATTGCCAATCTGTTGTGTTCTCG
AATTATGCCAGCCAGTGACCAGGGTGGCGGATTGCTCAATCACCTCTTAC
ATTGCATCAGCAAATTGGCTCACACAAAACCAGATTCAGCAATCTGAGAG
TATTCTGCAGTGTGCCGCCCTGACGGCTTAATTTGAAGCTCATATCTTGA
AGCTTCCATAATGGTTCTTGGGCCAAAATTTCGATAGCCTTATTTCCAAG
CAACAGTATGGTTTTCCCATTCCAAATTTGGATTTTGAGTGCATGCGAGA
AAAAGCTGCCTTCGGTGAATCACTAATTGTAAGGAAATACATTCTGTCAG
CTTGACCCTGTGTATTGACACACAGAGGACGCAGCTCCTCGTCCAAGTGA
TGGACCGTGTCATCCATTATTATTCACTTCCTCGGTCTGCATTGCATTGA
CTATTCAGTATTAATTACCTAATCTATCAAGTGAATAGAGGCCTACTACA
TCCCTCCCCTTGACGGCCCATCCACTAGAAGAATGTAGGGACGATTACCT
ACTTTCTGGGCTGGCTCTAAGGCGAGAGGAGGAGGTCTTTTTCCGTTTCA
CAGAGCGATTAGCGAAATTAGTTCAGGATCTATTCAAAAATTGACCCGCG
AGTCGACCAGAAACTATTTATCTCCCCGTCACTCCGCGTTAAAAGCCCCA
GCCCGAATTTCCTGTGACCCATTACCTGGCTGGCCTATGAGTCTCAATCA
GGCTCAATTTAAAAGCAAGAGGGGGGTTCCATTCCATGGGCGTAAGATTG
GAAAATCGAGGACAACCATTTTCAAGACTCGGCAAGGATATTGAAGTCTT
CCGCACTCTCTGCAGTAAACCTAGTCAGATTCGTGCCATTTTTAGGCACT
TGGATCGTTGCCATGATTCATAGAAATATCGATATTGATCATCTAAAAAA
ACCATGGAGATATAATTGATTCATCCATTCCGATTTTAGGACTTCAGTTT
GCAATGGGGTTTTATTTCAGAAACACAATTAGCATCTCACATAATGCACA
CTCAAAAATAAAATAGCGACGGATTCGACGTGATAATCTATAGAACGACG
ATAAATGAAAACATGCCAAATCGTAACGAGCAATGATCAATGGAAAACTG
GTCGCCACAAATACACAAGGCAAAAAAATTCTTCGGTGACTAGTTACTTT
CTTTCCAAAGTATTAATAGCTACTATACTGTACGGCTTACAATGAACTAT
GAGCTCCCATCGGGTTACACTAGCGACACTTTTGAGTGCGATGGCTTCGG
GATGTGAACATGATAGCATAACGCCAGGAAGTCTGGCAAGTTCGTGACCT
CAAGCCTTTATCAATAAAATGTGTGGTTGTTCAATTGCAGGATTCAACCA
GACTCGGACCAGTTCACGTTCTGCCATGGCTTGGTTCTGCATCGGAATCA
GTGCCAGCACAGTTTTGGCGATTGGTTGGGGTCCATAATGGAGTTCTCCC
GAACCTTACACGCCATGGATTTGGATATTCAGGCCTTTGCTTGCCTCTGC
GCCCTGACCCTAGTCACAGGTAAGACGATGTCCGATCATGATCCCCATCC
ATCCATGTTAGTTCCGGAATTAGACATGTTTCGTTTTGAATGCAATCGCC
TCAGGCACATATTACGGAAAATCACTGGACAAGAAGAGTCTGGAGGTCAG
CTGTTTTCCATTTGCCAAGGGGGACAAGTTTGTTTGGGAAAAATGCGACG
CATGGGTGTTAAAAATAGTACCATGGAGATGCTATAACTCTAAAATTGTC
CAATACCTCCCCATGATCTGGCAGATTTTGAGCTATGTATACTGTACTAT
TGTAGATATTAACTTTAAATATTCTGACTAGTCCTATCGTGAACACTGTT
GCCAGGACAATAGTAGATTAAATGCGTTCATAAAGATATCCTCAAGATCA
TCCTATCAATATCCAAAGATTCAATCCTAACAATTGGGAGTTATGTACGA
GGCTTAAAGTAGTCCGTCTTTGCCAGGGCAACCCTCAGAAGTAGTTCCAA
GTAAAGGCCCTTCGCATCCTGGATCTTGAAGCGTTTCCAGTCCAGATGAT
GCAGTAGTCTATGCCCCGGGGTAATGCAATGACCCTGCATTGGGAGCGAC
CAGACGTTTGGCCAGCCAAATGATTGTTCGTCATTGACGAGGGGTAGAAA
CTCTGCCTGGGAAGACTCAGGTGGAGGAAGGAGGGCGGAGGAGGAAATAT
CAGGCTTAGATTCCTCGTTTGCGGTTTTACCCTATGGCTTACGAGCTCGT
GAGACATATATTTGCCTTGGTTCTGGTTCACAGAGTTAAACATATGGATG
TGACAATCATCCGATACATTATTTTAGCCCCGGTTTTTTTATGTTCTATC
CTCTCGGGGACATGAATCAGACATGACCATGCTGAGGGCTGCCAATGTAT
CCCTTGAAATTCCCCAATCTCCTCTACGCCCAAGTGTCTGTGATGTGAAT
TAGCCGCCATTTCAACCCATCGACTGAGGTTGACAATTGGAGGTTGAGAC
AAGTAGTACTCCTGGAATTGAACGAACGCACACGATATACACTCGTGGAA
CTGTGTATTTGCTCGGTCTGACAGAATGTGTTTCGAACTGATCTCTTTGG
TTTAAAATGTATCCGGGTTGGGGATCTAAGAGTGAACCAGAACCGCTGTC
AACAAGATCCACGAGAGGGATTTCCGCATCTTAAATTTAGAAGGAAAACT
AGTTCGAGTTGGGTTTCTTGGAACACTAGACCGCGAGGCATCATTATCAA
ATTGGAGTAATGGAAATCAGTAGACGCTCTGAGGCTTGTGATGCAACAAA
ACCAACTTTTTTGAATTGAGACCGTAACCGAAATTTCAGTTGCGTTCAAT
TTCGATGAACGTCATTGCTGAATCGGTGCAGATGTAAAAACTGGTTTAGT
GCAGACTGCAGGAGACGTGTTAGCGCGTTCGCACAGAAATTTTGATCGTT
ATTTTGCGTTTAATGCAACCTAGTGTTTAATTCAATTGCAATTTCGGCAA
AAGTGACGCTCTTTTAGCAAAAGTTGTCAGTATTAAGCGACGGCATTGAA
AGAAAAAAAGCTCGTCCTGTAGAAACCCTCGGCGGCAGAAGGAAATGACC
AGGCATGGATAATCTCTAGGTCAGGCACATTTTTGCCTGCAGCGGCATTT
CATTTTAGGGGAGCACCAGTCGATTAATCATGTATTAGCTGAGACAAGTT
TCGGAGCATCCCTATTTGAGACACTTGAAAATTTTTCCGCTCCCCCGAGG
GCACCCCATTGGCGCCCGCATCCGCGCCGAGCCTCAAACCTCACCGCCTC
GTTCTTTCACATTCCAGATCGTCACGGCCTCTCTGATCCGAAGCGCGTGG
AAAATCTCCAATCCAAAGTGATCAATTCGCTCAAAGACCACGTGACCTAC
AATCCCGACGCTCAGAAGAAGCAGCAGTACTTCTCCCGGATCCTGGAGCG
CCTCACGCCCCTGAGGTCGCTGAGTGTCCAGGGGCTCCAGCGGATCTTCT
ATCTCAAAATGGAGGACACAGTCCCGGTTCCAGCTGTCATCGAGAAGATG
TTTGCCTCCAGCATCCCATTC

Synonyms

The feature 'probable nuclear hormone receptor hr38-like' has the following synonyms


Synonym
Tk00739

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