rna exonuclease nef-sp-like isoform x4, maker-scaffold142_size315517-snap-gene-0.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of rna exonuclease nef-sp-like isoform x4 vs. L. salmonis genes
Match: EMLSAG00000004039 (supercontig:LSalAtl2s:LSalAtl2s215:581442:583437:1 gene:EMLSAG00000004039 transcript:EMLSAT00000004039 description:"maker-LSalAtl2s215-snap-gene-5.18") HSP 1 Score: 393.275 bits (1009), Expect = 4.297e-130 Identity = 231/603 (38.31%), Postives = 340/603 (56.38%), Query Frame = 0 Query: 8 ASKRDRRVAAKKRKIAAFLTLAETNDQDEVIQSHRKRQKLPPAPSKPAVPAPLTDKPLVEGDDLQELRRRLRERKKYLLTLPHFDLKSLGQDASLELPLNMRTPLLMSDLHKLVTYSMLGNKSPCEPLRWCKMMKWNKLTHVNCLFIDGVSAQDFLDHRDTDPGCSISGLFPHKLEFVSPAAYDSTMASEMMILSVSQRRRAALMRSHKSLSKIIASGEAFKFYRAVFPVQEETEEEKVTEEAPTSPGTERERLKLKLLLSAEQMLSENYPLPLPGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREGS-ELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKLDNDFSFGDAVLGGTMPHLDVDAAKEAEENDKKQTLGMSLLDQAKKEERNIKIVVQSNIAQEYMAVDANESHIEQAPSLKSTLKLACDSALANNLTLCHIRAPQGDDM-WKKVQKATKKLWRHTSVNGMFITVLTGSVDENAFVGVAM 608 ++K+ R+ KKRK++AFL L E ++Q +P ++ + QELR +L+ERKK L P FDLKS G DAS+++ + R PL DL L++++M+G++S +P WCK+ KWNK+ ++ L +D + D++ +R+ D LFP+KL F+SP ++ E +LS+S + ++ S SL+ + S F F PV ETE+ + R QML +YP+P+PG K YV + SY V +SP+F +DCEMCLT G ELT IC+V+ +L V+YHSLVKP N I NYLT+YSGIT +L DV T V QN + ++L PD+I VG SLNSD+ A++MMHPYVIDTS I+N+TG R R++KL++L+ LFL + IQN G GH P+EDA + M+L LKL N +SFGD ++ D+ E + + S D K E+ ++I+ + EY + + S + Q S+ K AC+SA + +LTLCHI + DD+ KK+ K TK++W+ N +F + G ++AFVG+AM Sbjct: 27 STKKTERIERKKRKLSAFLKLVEEDEQK---------------------------RPRLDECEFQELRAKLKERKKKLQEFPKFDLKSQGHDASIDVLFSQRKPLFFQDLQNLLSFAMIGDRSSYKPYSWCKLDKWNKVKSMSVLVMDNLGLDDYISNRE-DLLRHWEPLFPYKLHFLSPQP---SLPKEFALLSLSSTLKYNIV-SKMSLNDALFSKTIFNF-----PVVTETEQALESSLKLKLLLNPR------------QMLECSYPMPIPGYSELKYAHYVPTFLSYDRVTNESPLFCIDCEMCLTVSGKLELTSICIVDEKLNVLYHSLVKPSNHIINYLTQYSGITKELLKDVTTTYV--QNKIIEILSPDSILVGHSLNSDMDAIQMMHPYVIDTSQIYNLTGNRQRRSKLALLTKLFLNKEIQNAGASGHCPMEDAISTMELALLKLKNGYSFGDTMMK--------DSQISHEMSKIEDEYKASFFDINCK-EKELQIIGVNESLHEYEELLPDSSILMQTKSINQCYKAACESAASKDLTLCHIPFGKLDDVNVKKLWKITKRVWKSVPSNSLFFNIWPGRNGQDAFVGIAM 569
BLAST of rna exonuclease nef-sp-like isoform x4 vs. L. salmonis genes
Match: EMLSAG00000004333 (supercontig:LSalAtl2s:LSalAtl2s227:69191:76584:1 gene:EMLSAG00000004333 transcript:EMLSAT00000004333 description:"maker-LSalAtl2s227-snap-gene-0.27") HSP 1 Score: 126.331 bits (316), Expect = 2.433e-30 Identity = 67/151 (44.37%), Postives = 95/151 (62.91%), Query Frame = 0 Query: 308 VFSVDCEMCLTREGSELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLV 458 ++++DCEMC T +ELTR+ V+N E + VY ++VKP ++ +Y TR+SGIT L +V T ++DVQ L + D I +G SL SDL ALKM+H V+DTS++F P K L L+A L + IQN GH+ EDA AA+ L+ Sbjct: 1069 IYALDCEMCYTTFCNELTRVTVINYEGKTVYETMVKPSRDVIDYNTRFSGITQKDLENVTTTIIDVQAVLLSMFSSDTILIGHSLESDLKALKMVHSMVVDTSIVFPHKMGPPYKRALKHLAAEHLKRIIQNDVG-GHDSAEDALAALDLM 1218
BLAST of rna exonuclease nef-sp-like isoform x4 vs. L. salmonis genes
Match: EMLSAG00000004308 (supercontig:LSalAtl2s:LSalAtl2s226:228505:231491:-1 gene:EMLSAG00000004308 transcript:EMLSAT00000004308 description:"maker-LSalAtl2s226-augustus-gene-2.26") HSP 1 Score: 103.605 bits (257), Expect = 1.683e-23 Identity = 56/163 (34.36%), Postives = 95/163 (58.28%), Query Frame = 0 Query: 308 VFSVDCEMCLTREGSELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAML-VDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKLDNDFSFG 469 V+S+DCEM T G EL +I V++ + VY S V+P + I ++ TR+SG+T L ++ L VQ L ++ D + +G +L++D L+++H V+D +V+F P + L L+ ++L +SIQ + GH+P EDA A+++L+ K+ D G Sbjct: 403 VYSLDCEMAFTTSGMELVKITVISVDGSPVYESFVQPDSRIVDHNTRFSGVTAKDLDINSTKTLKQVQRDLLRIISSDTVLIGHALDNDFRVLRLIHDKVVDXAVLFPHFXGIPXRRSLKSLAEIYLKRSIQTS-ERGHDPYEDALASVELILWKMRKDLDDG 564
BLAST of rna exonuclease nef-sp-like isoform x4 vs. L. salmonis genes
Match: EMLSAG00000009577 (supercontig:LSalAtl2s:LSalAtl2s616:216380:218137:-1 gene:EMLSAG00000009577 transcript:EMLSAT00000009577 description:"maker-LSalAtl2s616-augustus-gene-1.42") HSP 1 Score: 62.003 bits (149), Expect = 2.440e-10 Identity = 60/219 (27.40%), Postives = 95/219 (43.38%), Query Frame = 0 Query: 275 ENYPLPLPGLMSAKLQTYVLSKDSY----KEVHCQSPVFSVDCEMC---LTREGSELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITP-----AMLVDVETRLVDVQNALRDL-------------LPPDAIWVGQSLNSDLHALKMMHP--YVIDTSV------IFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNL 460 E+ P P G+ + T +S + K + + +DCEM S L R +VN + +Y VKP ++ +Y T SGI P M + +L + N L L + I VG ++ DL L + HP Y+ DTS+ IF+ G+ P L L+A +Q +G+ H+P+EDA+AA++L + Sbjct: 224 EDRPKPENGIQTESGNTGNISSEKSLVKNKSFEGLTKIIGMDCEMVGVGFNGARSILARASIVNHFGKTIYDKFVKPSEKVTDYRTDVSGIRPKDIAKGMFLHFPLQLAMIMNTLIFLGIEFKVVQEEISEIIKGRILVGHAIKHDLKVLYLSHPKKYIRDTSIYKPFRKIFD--GRTP---SLKKLTATIXSVXVQ-EGE--HSPVEDARAAVRLYTM 434
BLAST of rna exonuclease nef-sp-like isoform x4 vs. SwissProt
Match: gi|74760869|sp|Q96IC2.1|REXO5_HUMAN (RecName: Full=RNA exonuclease 5; AltName: Full=Exonuclease NEF-sp) HSP 1 Score: 162.54 bits (410), Expect = 5.193e-41 Identity = 121/376 (32.18%), Postives = 189/376 (50.27%), Query Frame = 0 Query: 117 LHKLVTYSMLGNKSPCEPLRWCKMMKWNKLTHVNCLFIDGVSAQDFLDHRDTDPGCSISGLFPHKLEFVSPAAYDSTMASEMMILSVSQRRRAALMRSHKSLSKIIASGEAFKFYRAVFPVQEETEEEKVTEEAPTSPGTERERLKLKLLLSAEQMLSENYPLPLPGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREGSELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKLDND-FSFGDAVLGGTMPHLDVDAAKEAEEN 491 L +L+ Y++LG + +P WC++ N L +V + G+S F + GC + F HK P+ S ++++ L QR +G+ K P + + G+++ L + LL+ E+M + PL G + ++L+K + + SP+F +DCEMCLT +G ELTRI +V V LVKP N+I +YLT +SGIT +L V T+L DVQ L+ LLPPDA+ VG SL+ DL ALKM+HPYVIDTS+++ ++ R+ KL L+ + LG+ IQ + GH+ EDA+ ++L L + + L H ++ AA + +N Sbjct: 66 LCELLKYAVLGKSNVPKP-SWCQLFHQNHLNNVVVFVLQGMSQLHFYRFY-LEFGC-LRKAFRHKFRLPPPS---SDFLADVVGLQTEQR-----------------AGDLPKTMEGPLPSNAKAAINLQDDPIIQKYGSKKVGLT-RCLLTKEEM--RTFHFPLQGFPDC--ENFLLTKCN-GSIADNSPLFGLDCEMCLTSKGRELTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKKILNPVTTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHPYVIDTSLLY--VREQGRRFKLKFLAKVILGKDIQCPDRLGHDATEDARTILELARYFLKHGPKKIAELNLEALANHQEIQAAGQEPKN 410
BLAST of rna exonuclease nef-sp-like isoform x4 vs. SwissProt
Match: gi|75077378|sp|Q4R9F7.1|REXO5_MACFA (RecName: Full=RNA exonuclease 5; AltName: Full=Putative RNA exonuclease NEF-sp) HSP 1 Score: 160.614 bits (405), Expect = 2.275e-40 Identity = 116/346 (33.53%), Postives = 176/346 (50.87%), Query Frame = 0 Query: 117 LHKLVTYSMLGNKSPCEPLRWCKMMKWNKLTHVNCLFIDGVSAQDFLDHRDTDPGCSISGLFPHKLEFVSPAAYDSTMASEMMILSVSQRRRAALMRSHKSLSKIIASGEAFKFYRAVFPVQEETEEEKVTEEAPTSPGTERERLKLKLLLSAEQMLSENYPLPLPGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREGSELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKL 462 L +L+ Y++LG + +P WC++ N L +V + G+S F + GC + F HK P+ S ++++ L QR G+ K P + + G ++ L + LL+ E+M + PL G + + ++L+K + + SP+F +DCEMCLT +G ELTRI +V V LVKP N+I +YLT +SGIT +L V T+L DVQ L+ LLPPDA+ VG SL+ DL ALKM+HPYVIDTS+++ ++ R+ KL L+ LG+ IQ + GH+ EDA+ ++L L Sbjct: 66 LCELLKYAVLGKSNVPKP-SWCQLFHQNHLNNVVVFVLQGMSQLHFYRFY-LEFGC-LRKAFRHKFRLPPPS---SDFLADIVGLQTKQR-----------------VGDLPKTMEGPLPSNAKATINLQNDPIIQKYGCKKVGLT-RCLLTKEEM--RTFHFPLQGF--PECENFLLTKCN-GSIADNSPLFGLDCEMCLTSKGRELTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITKKILNPVTTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHPYVIDTSLLY--VREQGRRFKLKFLAKAILGKDIQCPDRLGHDATEDARIILELAQYFL 380
BLAST of rna exonuclease nef-sp-like isoform x4 vs. SwissProt
Match: gi|122142858|sp|Q2T9U5.1|REXO5_BOVIN (RecName: Full=RNA exonuclease 5; AltName: Full=Putative RNA exonuclease NEF-sp) HSP 1 Score: 158.303 bits (399), Expect = 1.295e-39 Identity = 115/343 (33.53%), Postives = 180/343 (52.48%), Query Frame = 0 Query: 115 SDLHKLVTYSMLGNKSPCEPLRWCKMMKWNKLTHVNCLFIDGVSAQDFLDHRDTDPGCSISGLFPHKLEFVSPAAYDSTMASEMMILSVSQRRRAALMRSHKSLSKIIASGEAFKFYRAVFPVQEETEEEKVTEEAPTSPGTERERLKLKLLLSAEQMLSENYPLPLPGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREGSELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKL 457 L +L+ Y++LG S +P WC++ N L +V + G+S F ++ + F HK P+ S+ + + +++ + +L K + F + +Q++ +K G ++ L + LL+ E+M + Y PL G + + +V +K + V SP+F +DCEMCLT +G ELTRI +V V LVKP N+I +YLT +SGIT +L V T+L DVQ L+ LLPPDA+ VG SL+ DL ALKM+HPYVIDTS+++ ++ R+ KL L+ LG+ IQ + GH+ EDA+ ++L Sbjct: 65 GQLCELLKYAVLGKSSFPKP-SWCQLFHQNHLKNVVVFILQGLSQLHF--YKFYLEFGFLRKAFKHKFRMPPPS-------SDFLADIIGLQKKQII----GNLPKAMEGSLPFASSKVSINLQKDPIIQKY--------GFKKVGLT-RCLLTKEEM--KTYHFPLQGFLDC--ENFVPTKCN-GSVTDNSPLFGLDCEMCLTSKGRELTRISLVAEGGGCVMDELVKPDNKIVDYLTSFSGITKKILNPVTTKLKDVQRRLKILLPPDAVLVGHSLDLDLRALKMIHPYVIDTSLLY--VREQGRRFKLKFLAKAILGKDIQCPDRLGHDATEDARTTLEL 377
BLAST of rna exonuclease nef-sp-like isoform x4 vs. SwissProt
Match: gi|147732313|sp|A1A5R7.1|REXO5_RAT (RecName: Full=RNA exonuclease 5; AltName: Full=Putative RNA exonuclease NEF-sp) HSP 1 Score: 157.147 bits (396), Expect = 3.547e-39 Identity = 116/346 (33.53%), Postives = 186/346 (53.76%), Query Frame = 0 Query: 117 LHKLVTYSMLGNKSPCEPLRWCKMMKWNKLTHVNCLFIDGVSAQDFLDHRDTDPGCSISGLFPHKLEFVSPAAYDSTMASEMMILSVSQRRRAALMRSHKSLSKIIASGEAFKFYRAVFPVQEETEEEKVTEEAPTSPGTERERLKLKLLLSAEQMLSENYPLPLPGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREGSELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKL 462 L +L+ Y++LG + +P WC+++ +L +V + G+S F +R + F HK P S+ +++ L Q++++A +I++ ++ +Q + +K G + L + LL+ E+M + + PL G S + ++L K S + SP+F +DCE+CLT G ELTRI +V + LVKP +I +YLT +SGIT +L V T+L DVQ LR+LLPPDA+ VG L+ DL LK++HPYVIDTS+++ G++ R+ KL+ L+ + LG+ IQ K GH+ IEDA+ A++LV L Sbjct: 59 LCELLKYAILGKSTLPKP-SWCQLLHQKQLNNVVVFILKGMSQLHF--YRFYLEFRFLRKTFRHKFSLPPPT---SSFLFDIIGL---QKKKSARGCPRTVEGPLISAT-----LKSSIDLQNDPIIQKY--------GYKNVSLT-RCLLTKEEM--KTFHFPLQG--SPNCENFILLKYS-GFITDSSPLFGLDCEVCLTSMGKELTRISLVAEGGYCLMDELVKPDFKILDYLTSFSGITKEILNPVTTKLKDVQKLLRELLPPDAVLVGHCLDLDLRVLKIIHPYVIDTSLLY--IGKQGRRFKLTFLAKVILGKDIQCPNKLGHDGIEDARTALELVQYFL 374
BLAST of rna exonuclease nef-sp-like isoform x4 vs. SwissProt
Match: gi|380865444|sp|O94443.2|YFE9_SCHPO (RecName: Full=Uncharacterized exonuclease C637.09) HSP 1 Score: 141.739 bits (356), Expect = 2.478e-34 Identity = 78/208 (37.50%), Postives = 119/208 (57.21%), Query Frame = 0 Query: 266 LLSAEQMLSENYPLPLPGLMSAKLQT----YVLSKDSYKEVHCQSPVFSVDCEMCLTREGSELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKLDNDFSFG 469 L+S E + + YPL P +M + T +V S + + ++DCEM T G E+ R+ +V+ + EV+Y VKP + + +Y+T+YSGIT L +V T L DVQ+ L+ + + + +G SLNSDL+ LK HP++IDT+ I+N T P K L L+ +L + IQ G GH+ EDA A + L+ LK+ N +FG Sbjct: 231 LMSYESFIEDEYPL-HPTVMKGEEVTQPSGWVASAGDFHSPPINPKILAIDCEMVRTENGLEIARVTIVDMKSEVIYDEFVKPESPVTDYVTQYSGITEEKLRNVTTVLSDVQSYLKKTVDNNTVLLGHSLNSDLNCLKFTHPHIIDTANIYNHTRGPPSKPSLKWLATKWLRREIQKAGALGHDSAEDALACVDLLKLKVKNGPAFG 437
BLAST of rna exonuclease nef-sp-like isoform x4 vs. SwissProt
Match: gi|1723780|sp|P53331.1|REXO1_YEAST (RecName: Full=RNA exonuclease 1; AltName: Full=RNase H(70)) HSP 1 Score: 140.584 bits (353), Expect = 2.627e-34 Identity = 84/211 (39.81%), Postives = 125/211 (59.24%), Query Frame = 0 Query: 265 LLLSAEQMLSENYPLPL--PGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREGSELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAML-VDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKLDNDFSFGDAV 472 L+LS +Q+++ +YPL + +QT + H S +F++DCEMCL+ +G LTRI +VN + EV+Y LVKP I +YLTRYSGIT L V + L +VQ L ++ I +G SL +DL +K+ HP V+DT++I++ P K L LS FL +SIQN G+ H+ +EDA+A ++L LK+ N +FG + Sbjct: 187 LVLSEQQLVANDYPLDSGDTNFDTDWVQTVDFT-------HGGSHIFALDCEMCLSEQGLVLTRISLVNFDNEVIYEELVKPDVPIVDYLTRYSGITEEKLTVGAKKTLREVQKDLLKIISRSDILIGHSLQNDLKVMKLKHPLVVDTAIIYHHKAGDPFKPSLKYLSETFLNKSIQN-GE--HDSVEDARACLELTKLKILNGLAFGIGI 387
BLAST of rna exonuclease nef-sp-like isoform x4 vs. SwissProt
Match: gi|215274964|sp|Q8L7M4.2|SDN5_ARATH (RecName: Full=Small RNA degrading nuclease 5) HSP 1 Score: 136.732 bits (343), Expect = 6.183e-33 Identity = 73/166 (43.98%), Postives = 104/166 (62.65%), Query Frame = 0 Query: 304 CQSPVFSVDCEMCLTREGSELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKLDNDFSFG 469 C + ++DCEMC+T+EG ELTR+ +V+ + +V+ LV P N I +Y TRYSGIT M+ V T L D+Q L+ + I VG SL +DL +LK+ H VIDT+V++ R KTKL +L+ FL + IQ + + GH+ EDA+AAM L LK+ + FG Sbjct: 211 CPPEIVALDCEMCITKEGLELTRVTLVDIQGQVLLDKLVMPTNPITDYNTRYSGITAVMMEGVTTTLKDIQEEFLKLVFKETILVGHSLENDLLSLKISHNLVIDTAVLYKHPHGRSYKTKLRILAKKFLAREIQ-ESESGHDSAEDAKAAMDLALLKIKHGPDFG 375
BLAST of rna exonuclease nef-sp-like isoform x4 vs. SwissProt
Match: gi|81912689|sp|Q7TT28.1|REXO1_MOUSE (RecName: Full=RNA exonuclease 1 homolog; AltName: Full=Transcription elongation factor B polypeptide 3-binding protein 1) HSP 1 Score: 132.494 bits (332), Expect = 6.828e-31 Identity = 75/158 (47.47%), Postives = 98/158 (62.03%), Query Frame = 0 Query: 308 VFSVDCEMCLTREGSELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKLDND 465 VF++DCEM T G ELTR+ VV+++++VVY + VKP NE+ +Y TR+SG+T A LVD L DVQ L + D I +G SL SDL ALK++H V+DTSV+F P K L L A +L Q IQ+ GH+ EDA A M LV K+ D Sbjct: 1052 VFALDCEMSYTTYGLELTRVTVVDTDMQVVYDTFVKPDNEVVDYNTRFSGVTEADLVDTSITLRDVQAVLLSMFSADTILIGHSLESDLLALKVIHGTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDN-VDGHSSSEDASACMHLVIWKIRED 1208
BLAST of rna exonuclease nef-sp-like isoform x4 vs. SwissProt
Match: gi|212286373|sp|P48778.3|GOR_PANTR (RecName: Full=Exonuclease GOR; AltName: Full=Antigen GOR; AltName: Full=RNA exonuclease 1 homolog-like) HSP 1 Score: 130.183 bits (326), Expect = 1.775e-30 Identity = 73/169 (43.20%), Postives = 102/169 (60.36%), Query Frame = 0 Query: 294 LSKDSYKEVHCQSPVFSVDCEMCLTREGSELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKL 462 LS+D+Y + +++DCEMC T G ELTR+ VV++++ VVY + VKP NEI +Y TR+SG+T A + L VQ L I +G SL SDL ALK++H V+DT+V+F P K L L+A +LGQ IQ+ + GHN EDA A ++LV K+ Sbjct: 399 LSRDAYPGI------YALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVLDTAVLFPHYLGFPYKRSLRNLAADYLGQIIQDS-QDGHNSSEDANACLQLVMWKV 560
BLAST of rna exonuclease nef-sp-like isoform x4 vs. SwissProt
Match: gi|205831276|sp|Q8IX06.2|GOR_HUMAN (PUTATIVE PSEUDOGENE: RecName: Full=Putative exonuclease GOR; AltName: Full=Antigen GOR homolog; AltName: Full=RNA exonuclease 1 homolog-like 1) HSP 1 Score: 129.798 bits (325), Expect = 2.859e-30 Identity = 72/169 (42.60%), Postives = 101/169 (59.76%), Query Frame = 0 Query: 294 LSKDSYKEVHCQSPVFSVDCEMCLTREGSELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKL 462 LS+D+Y + +++DCEMC T G ELTR+ VV++++ VVY + VKP NEI +Y TR+SG+T A + L VQ L I +G SL SDL ALK++H V+DT+V+F P K L L+A +L Q IQ+ + GHN EDA A ++LV K+ Sbjct: 493 LSRDAYPGI------YALDCEMCYTTHGLELTRVTVVDADMRVVYDTFVKPDNEIVDYNTRFSGVTEADVAKTSITLPQVQAILLSFFSAQTILIGHSLESDLLALKLIHSTVVDTAVLFPHYLGFPYKRSLRNLAADYLAQIIQDS-QDGHNSSEDASACLQLVMWKV 654
BLAST of rna exonuclease nef-sp-like isoform x4 vs. nr
Match: gi|1325295195|ref|XP_023330635.1| (uncharacterized exonuclease C637.09-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 448.358 bits (1152), Expect = 1.326e-146 Identity = 262/655 (40.00%), Postives = 371/655 (56.64%), Query Frame = 0 Query: 9 SKRDRRVAAKKRKIAAFLTLAETNDQDEVIQSHRKRQKLPPAPSKPAVP-------------APLTDKPL-----------VEGDDLQELRRRLRERKKYLLTLPHFDLKSLGQDASLELPLNMRTPLLMSDLHKLVTYSMLGNKSPCEPLRWCKMMKWNKLTHVNCLFIDGVSAQDFLDHRDTDPGCSISGLFPHKLEFVSPAAYDSTMASEMMILSVSQRRRAALMRSHKSLSKIIASGEAFKFYRAVFPVQEE-------TEEEKVTEEAPTSPGTERERLKLKLLLSAEQMLSENYPLPLPGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREG-SELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGK--HGHNPIEDAQAAMKLVNLKLDNDFSFGDAVLGGTMPHLDVDAAKEAEEND-------------KKQTLGMSLLDQAKKEERNIKIVVQSNIAQEYMAVDANESHI---EQAPSLKSTLKLACDSALANNLTLCH--IRAPQGDDMWKKVQKATKKLWRHTSVNGMFITVLTGSVDENAFVGVAMNRP 611 +KR R+A+KKRK+ A L + + ND D KR+K+ PSKP P KP+ VEGD+ L+ RLRERKK L P F LKS+G++A L + R PL MSDL L+ Y +G K+P P RWC ++KWN+LT+V CL +DG+ +D P + F LE VSP++YD+T+A ++ ++ +SQ + L ++ + + E + +A+FP+ E ++P LKL+LL++ Q+++E++P+PLPG+ ++ YV ++D Y EVH SP+FS+DCEMC T G +ELTRIC+VN LEVVYHS VKP + I +YLTRYSGIT LV+V TRL DVQ L+ LLPPDAI VGQSLN DL AL+MMHPYVIDTS+IFNITG R RKTKLSVLS++FL + IQ Q GH+P EDA+AAM LV LKL + FGD +LGG +P + K +ND K L ++ AKK E+ + + V + A+ Y ++ S + ++ K L+ A+ ++ ++ H + + + K+ +K K ++ HTS NG+FI +L GS +E V + RP Sbjct: 5 NKRRARIASKKRKLNALLAVTDLNDSDG------KRRKVEDQPSKPNKPLRNFKSNKNFKSKTNSNSKPVLVTSINPNKLRVEGDEYLALKARLRERKKLLTQQPKFSLKSVGENALLSVEKERRIPLFMSDLQSLMLYCTVGGKTPYYPDRWCTLLKWNRLTNVVCLVLDGLGTNFLETRKDELPWITSKFNF---LEVVSPSSYDATVAKDLALIPISQTQIRKLRDDFGTVQEAVMKNEVWNTVKAMFPITNRKSTPAPAPPPVFPVTEDTSTPVEGWTSLKLRLLMNVRQLVTEDFPIPLPGV-EEHVKGYVFTRDEYHEVHDGSPMFSIDCEMCFTERGKNELTRICMVNENLEVVYHSYVKPESRIVDYLTRYSGITAEHLVNVNTRLKDVQADLKRLLPPDAILVGQSLNCDLKALEMMHPYVIDTSIIFNITGNRFRKTKLSVLSSIFLKKQIQVQSHVVVGHSPEEDAKAAMDLVKLKLKEGYQFGDVLLGGRIP--SIHEEKIEPQNDCIRKDFVPGHDLHLKSRLVSTITKTAKKAEKTVSLTVSESKAKTYETLENFTSEVKVFQKGTDHKDVLEKGKTGAVEHDFSITHLDLSTTPPEKICKRAEKFCKTMYSHTSSNGLFILILPGSKEETGAAAVTIVRP 647
BLAST of rna exonuclease nef-sp-like isoform x4 vs. nr
Match: gi|1325295191|ref|XP_023330634.1| (uncharacterized exonuclease C637.09-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 444.121 bits (1141), Expect = 6.196e-145 Identity = 262/659 (39.76%), Postives = 374/659 (56.75%), Query Frame = 0 Query: 9 SKRDRRVAAKKRKIAAFLTLAETNDQDEVIQSHRKRQKL-------PPAPSKP-----------------AVPAPLT----DKPLVEGDDLQELRRRLRERKKYLLTLPHFDLKSLGQDASLELPLNMRTPLLMSDLHKLVTYSMLGNKSPCEPLRWCKMMKWNKLTHVNCLFIDGVSAQDFLDHRDTDPGCSISGLFPHKLEFVSPAAYDSTMASEMMILSVSQRRRAALMRSHKSLSKIIASGEAFKFYRAVFPVQEE-------TEEEKVTEEAPTSPGTERERLKLKLLLSAEQMLSENYPLPLPGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREG-SELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGK--HGHNPIEDAQAAMKLVNLKLDNDFSFGDAVLGGTMPHLDVDAAKEAEEND-------------KKQTLGMSLLDQAKKEERNIKIVVQSNIAQEYMAVDANESHI---EQAPSLKSTLKLACDSALANNLTLCH--IRAPQGDDMWKKVQKATKKLWRHTSVNGMFITVLTGSVDENAFVGVAMNRP 611 +KR R+A+KKRK+ A L + + ND D KR+K+ P P+KP + P +T +K VEGD+ L+ RLRERKK L P F LKS+G++A L + R PL MSDL L+ Y +G K+P P RWC ++KWN+LT+V CL +DG+ +D P + F LE VSP++YD+T+A ++ ++ +SQ + L ++ + + E + +A+FP+ E ++P LKL+LL++ Q+++E++P+PLPG+ ++ YV ++D Y EVH SP+FS+DCEMC T G +ELTRIC+VN LEVVYHS VKP + I +YLTRYSGIT LV+V TRL DVQ L+ LLPPDAI VGQSLN DL AL+MMHPYVIDTS+IFNITG R RKTKLSVLS++FL + IQ Q GH+P EDA+AAM LV LKL + FGD +LGG +P + K +ND K L ++ AKK E+ + + V + A+ Y ++ S + ++ K L+ A+ ++ ++ H + + + K+ +K K ++ HTS NG+FI +L GS +E V + RP Sbjct: 5 NKRRARIASKKRKLNALLAVTDLNDSDG------KRRKVEENFTDQPSKPNKPLRNFKSNKNFKSKTNSNSKPVLVTSINPNKLRVEGDEYLALKARLRERKKLLTQQPKFSLKSVGENALLSVEKERRIPLFMSDLQSLMLYCTVGGKTPYYPDRWCTLLKWNRLTNVVCLVLDGLGTNFLETRKDELPWITSKFNF---LEVVSPSSYDATVAKDLALIPISQTQIRKLRDDFGTVQEAVMKNEVWNTVKAMFPITNRKSTPAPAPPPVFPVTEDTSTPVEGWTSLKLRLLMNVRQLVTEDFPIPLPGV-EEHVKGYVFTRDEYHEVHDGSPMFSIDCEMCFTERGKNELTRICMVNENLEVVYHSYVKPESRIVDYLTRYSGITAEHLVNVNTRLKDVQADLKRLLPPDAILVGQSLNCDLKALEMMHPYVIDTSIIFNITGNRFRKTKLSVLSSIFLKKQIQVQSHVVVGHSPEEDAKAAMDLVKLKLKEGYQFGDVLLGGRIP--SIHEEKIEPQNDCIRKDFVPGHDLHLKSRLVSTITKTAKKAEKTVSLTVSESKAKTYETLENFTSEVKVFQKGTDHKDVLEKGKTGAVEHDFSITHLDLSTTPPEKICKRAEKFCKTMYSHTSSNGLFILILPGSKEETGAAAVTIVRP 651
BLAST of rna exonuclease nef-sp-like isoform x4 vs. nr
Match: gi|970914232|ref|XP_015123460.1| (PREDICTED: uncharacterized exonuclease C637.09 isoform X1 [Diachasma alloeum]) HSP 1 Score: 400.979 bits (1029), Expect = 7.116e-128 Identity = 249/672 (37.05%), Postives = 371/672 (55.21%), Query Frame = 0 Query: 2 VSVSMEASKRDRRVAAKKRKIAAFLTLAETNDQDE------------------------VIQSHRKR---------------QKLPPAPSKPAVPAPLTDKPLVEGDDLQELRRRLRERKKYLLTLPHFDLKSLGQDASLE--LPLNMRTPLLMSDLHKLVTYSMLGNKSPCEPLRWCKMMKWNKLTHVNCLFIDGVSAQDFLDHRDTDPGCSISGLFPHKLEFVSPAAYDSTMASEMMILSVSQRRRAALMRSHKSLSKIIAS-GEAFKFYRAVFPVQEETEEEKVTEEAPTSPGTERERLKLKLLLSAEQMLSENYPLPLPGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREGS-ELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKLDNDFSFGDAVLGGTMPHLDVDAAKEAEENDKKQTLGMSLLDQAKKEERNIKIVVQSNIAQEY----------MAVDANESHIEQ-----APSLKSTLKLACDSALANNLTLCHIRAP----QGDDMWKKVQKATK---KLWRHTSVNGMFITVLTGSVDENAFVGVAM 608 ++ M K+ +R+ K++K+AA L + + ND+D + RKR + PP S+ + P + KP + G++ +L++ LRERKK L +P F LK++GQ+A L + N R P+ ++D+ L+ YS+LG+ SP P RWC + K+NK++H I+G+S F H I H+LE V+PAAY ++ E+ + ++ + AL++ SL + S G+ K + VFP++ + + P T++ + +LLLS Q++ ENYPLPL G ++ + + Y+L+KD Y E SP+F +DCEMC T G ELTRI +V+ ++ VVY SLVKP N+I +YLTRYSGIT +L +V T L +VQN LR+LLPPDAI VGQSLN+DLH L+MMHPY+IDTSVIFN TG+R RKTKL VL+ FL + IQ + K GH ED+QA+MKLV LKL N FGDAVL G L+ + ++ + ++ Q G+S+ K+++ IV ++ EY + DAN +Q A + K T+ A A+ + LT CH++ P Q D++ K + K K+W H ++NG+ V +G + NA G Sbjct: 3 TTMKMPTEKKLQRIEKKRKKMAALLEITKLNDKDREARALGLKNLEMESDNPPTSSEMSALSPSRKRPCTHSSSDPITSTPVGENPPEISEESDPG-VNKKPRLAGEEYAKLKQELRERKKILKNIPRFRLKAVGQNACLNDTIGPNERIPIFLADVQHLLMYSLLGHHSPFSPARWCHLEKFNKVSHTVVFIIEGLSMYHF--HSYESIFTHIGNNLEHRLEMVTPAAYGGSVIEELAAVPLTGTQSKALIQQFGSLEAAMQSTGDLVKLLKVVFPMRSPIPNGRPNPQ--NLPPTDKFP-RTQLLLSPWQLVEENYPLPLRGGLAIRYKDYILTKDEYLEATPTSPMFGLDCEMCRTTSGFLELTRISIVDEKMNVVYDSLVKPENKITDYLTRYSGITEEILKNVTTTLENVQNRLRELLPPDAILVGQSLNADLHTLRMMHPYIIDTSVIFNTTGERYRKTKLQVLAREFLSERIQ-ESKGGHCSTEDSQASMKLVQLKLANTVDFGDAVLIGQR-QLE-ETLRKQKSKEETQKFGVSIFKHVTKDKKTAAIVGTPDVMNEYSRYLKSSSLQVMDDANYDKNDQVRLVLAETNKQTVNRASQIAMEHALTFCHVKLPKDHLQVDNLEKTCRAVNKWMVKIWHHMAINGLACVVFSG--ENNASNGACF 663
BLAST of rna exonuclease nef-sp-like isoform x4 vs. nr
Match: gi|970914234|ref|XP_015123461.1| (PREDICTED: uncharacterized exonuclease C637.09 isoform X2 [Diachasma alloeum] >gi|970914236|ref|XP_015123462.1| PREDICTED: uncharacterized exonuclease C637.09 isoform X2 [Diachasma alloeum]) HSP 1 Score: 400.593 bits (1028), Expect = 8.763e-128 Identity = 249/670 (37.16%), Postives = 370/670 (55.22%), Query Frame = 0 Query: 4 VSMEASKRDRRVAAKKRKIAAFLTLAETNDQDE------------------------VIQSHRKR---------------QKLPPAPSKPAVPAPLTDKPLVEGDDLQELRRRLRERKKYLLTLPHFDLKSLGQDASLE--LPLNMRTPLLMSDLHKLVTYSMLGNKSPCEPLRWCKMMKWNKLTHVNCLFIDGVSAQDFLDHRDTDPGCSISGLFPHKLEFVSPAAYDSTMASEMMILSVSQRRRAALMRSHKSLSKIIAS-GEAFKFYRAVFPVQEETEEEKVTEEAPTSPGTERERLKLKLLLSAEQMLSENYPLPLPGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREGS-ELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKLDNDFSFGDAVLGGTMPHLDVDAAKEAEENDKKQTLGMSLLDQAKKEERNIKIVVQSNIAQEY----------MAVDANESHIEQ-----APSLKSTLKLACDSALANNLTLCHIRAP----QGDDMWKKVQKATK---KLWRHTSVNGMFITVLTGSVDENAFVGVAM 608 + M K+ +R+ K++K+AA L + + ND+D + RKR + PP S+ + P + KP + G++ +L++ LRERKK L +P F LK++GQ+A L + N R P+ ++D+ L+ YS+LG+ SP P RWC + K+NK++H I+G+S F H I H+LE V+PAAY ++ E+ + ++ + AL++ SL + S G+ K + VFP++ + + P T++ + +LLLS Q++ ENYPLPL G ++ + + Y+L+KD Y E SP+F +DCEMC T G ELTRI +V+ ++ VVY SLVKP N+I +YLTRYSGIT +L +V T L +VQN LR+LLPPDAI VGQSLN+DLH L+MMHPY+IDTSVIFN TG+R RKTKL VL+ FL + IQ + K GH ED+QA+MKLV LKL N FGDAVL G L+ + ++ + ++ Q G+S+ K+++ IV ++ EY + DAN +Q A + K T+ A A+ + LT CH++ P Q D++ K + K K+W H ++NG+ V +G + NA G Sbjct: 1 MKMPTEKKLQRIEKKRKKMAALLEITKLNDKDREARALGLKNLEMESDNPPTSSEMSALSPSRKRPCTHSSSDPITSTPVGENPPEISEESDPG-VNKKPRLAGEEYAKLKQELRERKKILKNIPRFRLKAVGQNACLNDTIGPNERIPIFLADVQHLLMYSLLGHHSPFSPARWCHLEKFNKVSHTVVFIIEGLSMYHF--HSYESIFTHIGNNLEHRLEMVTPAAYGGSVIEELAAVPLTGTQSKALIQQFGSLEAAMQSTGDLVKLLKVVFPMRSPIPNGRPNPQ--NLPPTDKFP-RTQLLLSPWQLVEENYPLPLRGGLAIRYKDYILTKDEYLEATPTSPMFGLDCEMCRTTSGFLELTRISIVDEKMNVVYDSLVKPENKITDYLTRYSGITEEILKNVTTTLENVQNRLRELLPPDAILVGQSLNADLHTLRMMHPYIIDTSVIFNTTGERYRKTKLQVLAREFLSERIQ-ESKGGHCSTEDSQASMKLVQLKLANTVDFGDAVLIGQR-QLE-ETLRKQKSKEETQKFGVSIFKHVTKDKKTAAIVGTPDVMNEYSRYLKSSSLQVMDDANYDKNDQVRLVLAETNKQTVNRASQIAMEHALTFCHVKLPKDHLQVDNLEKTCRAVNKWMVKIWHHMAINGLACVVFSG--ENNASNGACF 659
BLAST of rna exonuclease nef-sp-like isoform x4 vs. nr
Match: gi|572259287|ref|XP_006607993.1| (PREDICTED: putative RNA exonuclease NEF-sp-like isoform X4 [Apis dorsata]) HSP 1 Score: 398.667 bits (1023), Expect = 1.359e-127 Identity = 234/579 (40.41%), Postives = 331/579 (57.17%), Query Frame = 0 Query: 63 KPLVEGDDLQELRRRLRERKKYLLTLPHFDLKSLGQDASLELPLNM--RTPLLMSDLHKLVTYSMLGNKSPCEPLRWCKMMKWNKLTHVNCLFIDGVSAQDFLDHRDTDPGCSISGLFPHKLEFVSPAAYDSTMASEMMILSVSQRRRAALMRSHKSLSKIIASG-EAFKFYRAVFPVQEE--TEEEKVTEEAPTSPGTERERLKLKLLLSAEQMLSENYPLPLPGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREGS-ELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKLDNDFSFGDAVLGG--TMPHLDVDAAKEAEENDKKQT----LGMSLLDQAKKEERNIKIVVQSNIAQEY---------MAVDANESHIEQ-----APSLKSTLKLACDSALANNLTLCHIRAPQG-------DDMWKKVQKATKKLWRHTSVNGMFITVLTGSVDENAFVGVAM 608 KP + GDD +L+ LRERKK L +P F LK++G+ ASL + + R P+ +SD+ L+ YS+ G+ SP P RWC++ K+NK+TH ++G+S F+ + P I+ H++E V+P AY ++ ++ + ++ + L++ + SL + S + K R VFP+ E T EK + P + R +L LLS QM+ ENYP+PL G ++ K + Y+++KD Y EV+ +SP+F +DCEMC T G ELTRI +V+ ++++Y+SLVKP N I +YLTR+SGIT ML V T L DVQ LR LLP DAI VGQSLNSDLH LKMMHPY+IDTSVIFNITG R RKTKL L FLG+ IQ + K GH P ED+QA+MKLV LKL N +GDAVL G M L ++A K + +T S+ K++++ IV + EY + D N + +Q A + K + A A+ + TLCHIR Q + ++ V K KLW+H +VNG+ + G + NA G Sbjct: 42 KPRLSGDDYLKLKHELRERKKQLTKIPRFQLKAVGESASLSINVKSENRIPIFLSDVQHLLLYSLHGHHSPYVPTRWCQLEKYNKVTHTVVFVVEGLSLYHFMAYESMFP--YITSKLEHRVEIVTPTAYGGSVIEDLAAVPITGIQSDKLIKQYGSLEAALQSNSDVIKLLRTVFPMYENLSTSAEKFKTGSELPPTDKFPRTQL--LLSLCQMVEENYPVPLKGELAKKYENYIMTKDVYVEVNAKSPMFGLDCEMCKTTTGELELTRISLVDESMKIIYNSLVKPDNPITDYLTRFSGITKNMLDGVRTTLSDVQQTLRKLLPTDAILVGQSLNSDLHTLKMMHPYIIDTSVIFNITGDRYRKTKLQTLVKEFLGERIQ-ENKSGHCPTEDSQASMKLVQLKLANSLDYGDAVLLGQCNMNVLKMEAEKRTNDQQSFKTEIRKYATSIFKHVTKDKKSAAIVGIGEVMNEYSKYLTCSLNIMDDENFNENDQVRLVVADNDKQAVLRASQIAMEHAFTLCHIRINQEKLKYDQIEKTFRTVNKWIHKLWQHMAVNGLACVIFPG--ENNAANGACF 613
BLAST of rna exonuclease nef-sp-like isoform x4 vs. nr
Match: gi|572259285|ref|XP_006607992.1| (PREDICTED: putative RNA exonuclease NEF-sp-like isoform X3 [Apis dorsata]) HSP 1 Score: 398.667 bits (1023), Expect = 1.634e-127 Identity = 234/579 (40.41%), Postives = 331/579 (57.17%), Query Frame = 0 Query: 63 KPLVEGDDLQELRRRLRERKKYLLTLPHFDLKSLGQDASLELPLNM--RTPLLMSDLHKLVTYSMLGNKSPCEPLRWCKMMKWNKLTHVNCLFIDGVSAQDFLDHRDTDPGCSISGLFPHKLEFVSPAAYDSTMASEMMILSVSQRRRAALMRSHKSLSKIIASG-EAFKFYRAVFPVQEE--TEEEKVTEEAPTSPGTERERLKLKLLLSAEQMLSENYPLPLPGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREGS-ELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKLDNDFSFGDAVLGG--TMPHLDVDAAKEAEENDKKQT----LGMSLLDQAKKEERNIKIVVQSNIAQEY---------MAVDANESHIEQ-----APSLKSTLKLACDSALANNLTLCHIRAPQG-------DDMWKKVQKATKKLWRHTSVNGMFITVLTGSVDENAFVGVAM 608 KP + GDD +L+ LRERKK L +P F LK++G+ ASL + + R P+ +SD+ L+ YS+ G+ SP P RWC++ K+NK+TH ++G+S F+ + P I+ H++E V+P AY ++ ++ + ++ + L++ + SL + S + K R VFP+ E T EK + P + R +L LLS QM+ ENYP+PL G ++ K + Y+++KD Y EV+ +SP+F +DCEMC T G ELTRI +V+ ++++Y+SLVKP N I +YLTR+SGIT ML V T L DVQ LR LLP DAI VGQSLNSDLH LKMMHPY+IDTSVIFNITG R RKTKL L FLG+ IQ + K GH P ED+QA+MKLV LKL N +GDAVL G M L ++A K + +T S+ K++++ IV + EY + D N + +Q A + K + A A+ + TLCHIR Q + ++ V K KLW+H +VNG+ + G + NA G Sbjct: 59 KPRLSGDDYLKLKHELRERKKQLTKIPRFQLKAVGESASLSINVKSENRIPIFLSDVQHLLLYSLHGHHSPYVPTRWCQLEKYNKVTHTVVFVVEGLSLYHFMAYESMFP--YITSKLEHRVEIVTPTAYGGSVIEDLAAVPITGIQSDKLIKQYGSLEAALQSNSDVIKLLRTVFPMYENLSTSAEKFKTGSELPPTDKFPRTQL--LLSLCQMVEENYPVPLKGELAKKYENYIMTKDVYVEVNAKSPMFGLDCEMCKTTTGELELTRISLVDESMKIIYNSLVKPDNPITDYLTRFSGITKNMLDGVRTTLSDVQQTLRKLLPTDAILVGQSLNSDLHTLKMMHPYIIDTSVIFNITGDRYRKTKLQTLVKEFLGERIQ-ENKSGHCPTEDSQASMKLVQLKLANSLDYGDAVLLGQCNMNVLKMEAEKRTNDQQSFKTEIRKYATSIFKHVTKDKKSAAIVGIGEVMNEYSKYLTCSLNIMDDENFNENDQVRLVVADNDKQAVLRASQIAMEHAFTLCHIRINQEKLKYDQIEKTFRTVNKWIHKLWQHMAVNGLACVIFPG--ENNAANGACF 630
BLAST of rna exonuclease nef-sp-like isoform x4 vs. nr
Match: gi|1061119996|ref|XP_017885742.1| (PREDICTED: putative RNA exonuclease NEF-sp [Ceratina calcarata]) HSP 1 Score: 399.438 bits (1025), Expect = 1.948e-127 Identity = 250/648 (38.58%), Postives = 363/648 (56.02%), Query Frame = 0 Query: 8 ASKRDRRVAAKKRKIAAFLTLAETNDQDEVIQ-----------------SHRKR-------QKLPPAPSKPAVP--APLTDKPLVEGDDLQELRRRLRERKKYLLTLPHFDLKSLGQDASLELPLNM--RTPLLMSDLHKLVTYSMLGNKSPCEPLRWCKMMKWNKLTHVNCLFIDGVSAQDFLDHRDTDPGCSISGLFPHKLEFVSPAAYDSTMASEMMILSVSQRRRAALMRSHKSLSKII-ASGEAFKFYRAVFPVQEETEEE-KVTEEAPTSPGTERERLKLKLLLSAEQMLSENYPLPLPGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREGS-ELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKLDNDFSFGDAVLGGTMPHLDVDAAKEAEENDKKQTL---GMSLLDQAKKEERNIKIVVQSNIAQEY-------MAVDANESHIEQAPSL--------KSTLKLACDSALANNLTLCHIRAPQGDD----------MWKKVQKATKKLWRHTSVNGMFITVLTG 596 SK+ R+ KK+K+AA L + + ND+D + S RKR Q L + ++ A KP + G++ +L++ LR RKK L LP F LK++G+ ASL++ LN R P+ ++D+ L+ YS+ G+ SP P RWC++ K+NK+ H L ++G+S F+ + IS H++E V+P AY ++ ++ + ++ + L++ + SL + ++G+ K RAVFPVQE + + + + P + R RL LLS QM+ ENYP+PL G ++ K +Y+++KDSY E SP+F +DCEMC T G ELTRI +V+ ++++VY SLV+P N I +YLTR+SGIT ML DV T L DVQ LR LLPPDAI VGQSLNSDLH L+MMHPY+IDTSVIFNITG R RKTKL L FLG+ IQ + GH ED+ A+MKLV LKL N +GDAVL G D+ A K E K L S+ ++++ IV +++ QEY +AV +++H ++ + K + A A+ + TLCH+R DD ++ V K KLW+HT+VNG+ + TG Sbjct: 5 TSKQLTRIEKKKKKMAALLEITKLNDKDRKAKIILKKDDMEQVSDTEEASRRKRPCDKDAKQDLDETEKEESLETEAVANKKPRLSGEEYLKLKQELRARKKKLTALPRFQLKAVGESASLKVNLNSEDRIPIFLTDVQHLLLYSLHGHHSPYLPTRWCQLEKYNKVPHTVVLVVEGLSLYHFVAYESMFR--HISTKLEHQVEVVTPCAYGGSVIEDLAAVPITGVQCDKLLKQYGSLEAALRSTGDVIKLLRAVFPVQENVHTDVETSHKLPVTDKFSRTRL----LLSLCQMVEENYPVPLKGELAKKYGSYLMTKDSYIEASAVSPMFGLDCEMCKTTTGELELTRISLVDEDMKIVYDSLVRPANPITDYLTRFSGITKEMLQDVTTSLADVQQTLRQLLPPDAILVGQSLNSDLHTLRMMHPYIIDTSVIFNITGDRYRKTKLQTLVREFLGERIQ-ESNSGHCSTEDSLASMKLVQLKLANSVDYGDAVLLG---RCDMRALKLEENGKIKNDLKKYATSIFKHVTRDKKTAAIVGVTDVIQEYSKYLTDSVAV-MDDTHFDKDDQVRLVVTDNSKQAVTRASQIAMEHAFTLCHLRV--DDDRLSTDEKLSKAFRNVNKWVSKLWQHTAVNGLVCVIFTG 639
BLAST of rna exonuclease nef-sp-like isoform x4 vs. nr
Match: gi|755955718|ref|XP_011303193.1| (PREDICTED: putative RNA exonuclease NEF-sp [Fopius arisanus] >gi|755955721|ref|XP_011303194.1| PREDICTED: putative RNA exonuclease NEF-sp [Fopius arisanus] >gi|755955724|ref|XP_011303195.1| PREDICTED: putative RNA exonuclease NEF-sp [Fopius arisanus]) HSP 1 Score: 399.438 bits (1025), Expect = 2.293e-127 Identity = 250/678 (36.87%), Postives = 365/678 (53.83%), Query Frame = 0 Query: 4 VSMEASKRDRRVAAKKRKIAAFLTLAETNDQDE------------------------VIQSHRKRQ-------------------KLPPAPSKPAVPAPLTDKPLVEGDDLQELRRRLRERKKYLLTLPHFDLKSLGQDASLE--LPLNMRTPLLMSDLHKLVTYSMLGNKSPCEPLRWCKMMKWNKLTHVNCLFIDGVSAQDFLDHRDTDPGCSISGLFPHKLEFVSPAAYDSTMASEMMILSVSQRRRAALMRSHKSLSKIIAS-GEAFKFYRAVFPVQE--ETEEEKVTEEAPTS--PGTERERLKLKLLLSAEQMLSENYPLPLPGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREGS-ELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKLDNDFSFGDAVLGGTMPHLDVDAAKEAEENDKKQTLGMSLLDQAKKEERNIKIVVQSNIAQEY----------MAVDAN---ESHIE--QAPSLKSTLKLACDSALANNLTLCHIRAPQG-------DDMWKKVQKATKKLWRHTSVNGMFITVLTGSVDENAFVGVAM 608 + M K+ +R+ K++K+AA L + + ND+D + RKR K P S P V KP + G++ +L++ LRERKK L +P F LK++G++ASL + + R P+ ++D+ L+ YS+LG+ SP P RWC + K+NK++H ++G+S F H I H+LE V+PAAY ++ E+ + ++ + L++ SL + S G+ K + VFP++ +T + P P T+ LLLS Q++ ENYPLPL G ++ + + YVL+KD Y E SP+F +DCEMC T G ELTRI +V+ +++V+Y SLVKP N+I +YLTRYSGIT +L++V T L DVQN LR+LLPPDAI VGQSLN+DLH L+MMHPY+IDTSVIFN TG+R RKTKL VL+ FL + IQ + K GH ED+ A+MKLV LKL N FGDAVL G + ++++E + Q G+S+ K++R IV S++ EY + DAN H+ A + K T+ A A+ + LT CH++ PQ + + V K K+W H ++NG+ V +G + NA G Sbjct: 1 MKMPTEKQLQRIEKKRKKMAALLEITKLNDKDREARALGLKNIEMNSNNPPSSCEMSALSPSRKRPCNHSSTAAITSTPEGENPPKELPEESHPGV----NKKPRLAGEEYAKLKQELRERKKVLKNIPRFRLKAVGENASLNNAIKHDERIPIFLADVQHLLMYSLLGHHSPFSPARWCHLEKFNKVSHTVVFIVEGLSMYHFHSHESI--FTHIGNNLEHRLELVTPAAYGGSVIEELAAVPLTGTQSNGLIQQFGSLEAAMQSTGDLVKLLKVVFPMRSPPQTGLPNLNNLPPADKFPRTQ-------LLLSPWQLVEENYPLPLRGGLANRYKDYVLTKDEYLEATPNSPMFGLDCEMCRTTTGFLELTRISIVDEQMKVIYESLVKPENKITDYLTRYSGITEELLINVTTTLKDVQNRLRELLPPDAILVGQSLNADLHTLRMMHPYIIDTSVIFNTTGERYRKTKLQVLAREFLSERIQ-ESKSGHCSTEDSLASMKLVQLKLANTVDFGDAVLIGQRELEETLRKRKSKE--ETQKFGVSIFKHVTKDKRTAAIVSTSDVMNEYSRYMKASSLHVMDDANYDKNDHVRLVLAETNKQTVNRASQIAMEHALTFCHVKIPQDHLQLENVERTCRAVNKWMTKIWHHMAINGLACVVFSG--ESNASNGACF 660
BLAST of rna exonuclease nef-sp-like isoform x4 vs. nr
Match: gi|571499281|ref|XP_006557418.1| (PREDICTED: putative RNA exonuclease NEF-sp isoform X2 [Apis mellifera]) HSP 1 Score: 398.282 bits (1022), Expect = 2.982e-127 Identity = 233/579 (40.24%), Postives = 332/579 (57.34%), Query Frame = 0 Query: 63 KPLVEGDDLQELRRRLRERKKYLLTLPHFDLKSLGQDASLELPLNM--RTPLLMSDLHKLVTYSMLGNKSPCEPLRWCKMMKWNKLTHVNCLFIDGVSAQDFLDHRDTDPGCSISGLFPHKLEFVSPAAYDSTMASEMMILSVSQRRRAALMRSHKSLSKIIASG-EAFKFYRAVFPVQEE--TEEEKVTEEAPTSPGTERERLKLKLLLSAEQMLSENYPLPLPGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREGS-ELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKLDNDFSFGDAVLGG--TMPHLDVDAAKEAEENDKKQT----LGMSLLDQAKKEERNIKIVVQSNIAQEY---------MAVDANESHIEQ-----APSLKSTLKLACDSALANNLTLCHIRAPQG-------DDMWKKVQKATKKLWRHTSVNGMFITVLTGSVDENAFVGVAM 608 KP + GDD +L+ LRERKK L +P F LK++G+ ASL + + R P+ +SD+ L+ YS+ G+ SP P RWC++ K+NK+TH ++G+S F+ + + P I+ H++E V+P AY ++ ++ + ++ + L++ + SL + S + K R VFP+ E T EK + P + R +L LLS QM+ ENYP+PL G ++ K + Y+++KD Y EV+ +SP+F +DCEMC T G ELTRI +V+ ++++Y++LVKP N I +YLTR+SGIT ML V T L DVQ LR LLP DAI VGQSLNSDLH LKMMHPY+IDTSVIFNITG R RKTKL L FLG+ IQ + K GH P ED+QA+MKLV LKL N +GDAVL G M L ++A K + +T S+ K++++ IV + EY + D N + +Q A + K + A A+ + TLCHIR Q + ++ V K KLW+H +VNG+ + G + NA G Sbjct: 59 KPRLSGDDYLKLKHELRERKKQLTKIPRFQLKAVGESASLSINVKSENRIPIFLSDVQHLLLYSLHGHHSPYVPTRWCQLEKYNKVTHTVVFVVEGLSLYHFMAYENMFP--YITSKLEHRVEIVTPTAYGGSVIEDLAAVPITGIQSDKLIKQYGSLEAALQSNSDVIKLLRTVFPMYENLSTNAEKFKTGSELPPTDKFPRTQL--LLSLCQMVEENYPVPLKGELAKKYENYIMTKDVYVEVNAKSPMFGLDCEMCKTTTGELELTRISLVDESMKIIYNTLVKPDNPITDYLTRFSGITKNMLDGVTTTLSDVQQTLRKLLPTDAILVGQSLNSDLHTLKMMHPYIIDTSVIFNITGDRYRKTKLQTLVKEFLGERIQ-ENKSGHCPTEDSQASMKLVQLKLANSLDYGDAVLLGQCNMNVLKMEAEKRTNDQHSFKTEIRKYATSIFKHVTKDKKSAAIVGIGEVMNEYSKYLTCSLNIMDDENFNENDQVRLVIADNDKQAVLRASQIAMEHAFTLCHIRINQEKLKYDQIEKTFRTVNKWVHKLWQHMAVNGLACVIFPG--ENNAANGACF 630
BLAST of rna exonuclease nef-sp-like isoform x4 vs. nr
Match: gi|572259281|ref|XP_006607990.1| (PREDICTED: putative RNA exonuclease NEF-sp-like isoform X1 [Apis dorsata] >gi|572259283|ref|XP_006607991.1| PREDICTED: putative RNA exonuclease NEF-sp-like isoform X2 [Apis dorsata]) HSP 1 Score: 399.438 bits (1025), Expect = 3.461e-127 Identity = 234/579 (40.41%), Postives = 331/579 (57.17%), Query Frame = 0 Query: 63 KPLVEGDDLQELRRRLRERKKYLLTLPHFDLKSLGQDASLELPLNM--RTPLLMSDLHKLVTYSMLGNKSPCEPLRWCKMMKWNKLTHVNCLFIDGVSAQDFLDHRDTDPGCSISGLFPHKLEFVSPAAYDSTMASEMMILSVSQRRRAALMRSHKSLSKIIASG-EAFKFYRAVFPVQEE--TEEEKVTEEAPTSPGTERERLKLKLLLSAEQMLSENYPLPLPGLMSAKLQTYVLSKDSYKEVHCQSPVFSVDCEMCLTREGS-ELTRICVVNSELEVVYHSLVKPHNEIRNYLTRYSGITPAMLVDVETRLVDVQNALRDLLPPDAIWVGQSLNSDLHALKMMHPYVIDTSVIFNITGQRPRKTKLSVLSALFLGQSIQNQGKHGHNPIEDAQAAMKLVNLKLDNDFSFGDAVLGG--TMPHLDVDAAKEAEENDKKQT----LGMSLLDQAKKEERNIKIVVQSNIAQEY---------MAVDANESHIEQ-----APSLKSTLKLACDSALANNLTLCHIRAPQG-------DDMWKKVQKATKKLWRHTSVNGMFITVLTGSVDENAFVGVAM 608 KP + GDD +L+ LRERKK L +P F LK++G+ ASL + + R P+ +SD+ L+ YS+ G+ SP P RWC++ K+NK+TH ++G+S F+ + P I+ H++E V+P AY ++ ++ + ++ + L++ + SL + S + K R VFP+ E T EK + P + R +L LLS QM+ ENYP+PL G ++ K + Y+++KD Y EV+ +SP+F +DCEMC T G ELTRI +V+ ++++Y+SLVKP N I +YLTR+SGIT ML V T L DVQ LR LLP DAI VGQSLNSDLH LKMMHPY+IDTSVIFNITG R RKTKL L FLG+ IQ + K GH P ED+QA+MKLV LKL N +GDAVL G M L ++A K + +T S+ K++++ IV + EY + D N + +Q A + K + A A+ + TLCHIR Q + ++ V K KLW+H +VNG+ + G + NA G Sbjct: 101 KPRLSGDDYLKLKHELRERKKQLTKIPRFQLKAVGESASLSINVKSENRIPIFLSDVQHLLLYSLHGHHSPYVPTRWCQLEKYNKVTHTVVFVVEGLSLYHFMAYESMFP--YITSKLEHRVEIVTPTAYGGSVIEDLAAVPITGIQSDKLIKQYGSLEAALQSNSDVIKLLRTVFPMYENLSTSAEKFKTGSELPPTDKFPRTQL--LLSLCQMVEENYPVPLKGELAKKYENYIMTKDVYVEVNAKSPMFGLDCEMCKTTTGELELTRISLVDESMKIIYNSLVKPDNPITDYLTRFSGITKNMLDGVRTTLSDVQQTLRKLLPTDAILVGQSLNSDLHTLKMMHPYIIDTSVIFNITGDRYRKTKLQTLVKEFLGERIQ-ENKSGHCPTEDSQASMKLVQLKLANSLDYGDAVLLGQCNMNVLKMEAEKRTNDQQSFKTEIRKYATSIFKHVTKDKKSAAIVGIGEVMNEYSKYLTCSLNIMDDENFNENDQVRLVVADNDKQAVLRASQIAMEHAFTLCHIRINQEKLKYDQIEKTFRTVNKWIHKLWQHMAVNGLACVIFPG--ENNAANGACF 672 The following BLAST results are available for this feature:
BLAST of rna exonuclease nef-sp-like isoform x4 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 4
BLAST of rna exonuclease nef-sp-like isoform x4 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of rna exonuclease nef-sp-like isoform x4 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold142_size315517:79901..83901- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold142_size315517-snap-gene-0.17 ID=maker-scaffold142_size315517-snap-gene-0.17|Name=rna exonuclease nef-sp-like isoform x4|organism=Tigriopus kingsejongensis|type=gene|length=4001bp|location=Sequence derived from alignment at scaffold142_size315517:79901..83901- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'rna exonuclease nef-sp-like isoform x4' has the following synonyms
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