39s ribosomal protein mitochondrial, maker-scaffold170_size291898-snap-gene-1.44 (gene) Tigriopus kingsejongensis

Overview
Name39s ribosomal protein mitochondrial
Unique Namemaker-scaffold170_size291898-snap-gene-1.44
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Match: EMLSAG00000005614 (supercontig:LSalAtl2s:LSalAtl2s3012:1:1104:1 gene:EMLSAG00000005614 transcript:EMLSAT00000005614 description:"maker-LSalAtl2s3012-augustus-gene-0.6")

HSP 1 Score: 113.235 bits (282), Expect = 7.064e-32
Identity = 56/125 (44.80%), Postives = 86/125 (68.80%), Query Frame = 0
Query:  133 LELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256
            +ELK YN +  +AVL GTKWE  L+F E+  ++QY+TFG +I  +  +++FEKK P L +IGA+  D+I+ R +++++++L ++  L  QL SIL  P R+T S +G     LSQNL Q++KDQS
Sbjct:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 125          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|121995499|sp|Q29NV5.1|RM10_DROPS (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor)

HSP 1 Score: 87.0409 bits (214), Expect = 3.397e-19
Identity = 59/235 (25.11%), Postives = 114/235 (48.51%), Query Frame = 0
Query:   30 RASSRPSIQHPHHPSFDRLKLLTVSEPRH-SVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFG-QEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTVS 262
            R   + +IQ P  P ++R +++ V++P++  +P        R C +        +LE  NPY +I ARE+R  L  S +V ++H N++T            +  L LKSY  +I +  + GT +E ++  +    S+  + F   +  +  +L+  ++ P + ++G +++  ++ R E+M  A + NL   + QL   L + A +    +  H   L Q L+ + K  +GDT  +
Sbjct:   23 RFRGKINIQRPKEPHYERARVVAVTQPKYPELPKA------RSCFQTRAERTKEQLE--NPYNEIIAREVRNWLNHSQLVAIFHLNSITADEIFRVRVQLHKQNLHLKSYGRKIIDQAVTGTPYEAIMPLFH---SNHCIVFSPNQQQIGALLKITRRVPQMVLLGGIVEKTLLSRNELMAYAQMPNLQGAQAQLVQTLNLAAGQLVQHLQTHQANLVQVLDVHAKG-NGDTNTN 245          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|74870265|sp|Q9VPL3.1|RM10_DROME (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor)

HSP 1 Score: 75.8702 bits (185), Expect = 4.197e-15
Identity = 53/234 (22.65%), Postives = 114/234 (48.72%), Query Frame = 0
Query:   30 RASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPH-PTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSIL-QMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTT 260
            R   + +IQ P  P ++R +++ V++P++  P  P  ++ ++        A   + +  NPY +I ARE+R  L+ S +V  +H +++T            +  L LKSY  +I E  ++ T++E ++  +    S+  + F  +      +L+  ++ P + ++G ++++ ++ R +++  A +  L  ++ QL   L Q P      L   H  +  Q L+ + K+Q  + T
Sbjct:   23 RFRGKINIQRPKAPHYERARVVAVTQPKY--PELPKAKSCFKT------RAERTQQQQENPYNEIIAREVRNWLDHSRLVAFFHLSSITADDIFRVRVQLHKQNLHLKSYGSKIIEQAVKNTRYEAIVPLFH---SNHCIVFSPDPEKTAALLRIVRRVPQMVLLGGIVEETMLSRNQLVAYAQMPGLHAVQAQLVQTLSQAPGHLIQQLQA-HQNSFVQVLDVHAKNQMNEET 244          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|82178554|sp|Q5BJB7.1|RM10_DANRE (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor)

HSP 1 Score: 73.9442 bits (180), Expect = 1.989e-14
Identity = 65/262 (24.81%), Postives = 113/262 (43.13%), Query Frame = 0
Query:    4 LSAALILRARPGVAWGSSAGLSTSAGRASSRPSIQHPHHPSFDRLKLLTVSE---PRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENL--LYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTT 260
            ++A L  R  P   W       T + R  S+   +H     F + KLL V+E   P  S P        +    E+ LA             +  ++L  L ++  M+ +   N ++           ++  + +K +  Q+  + L  + + N+  L F ET      L   +E  VK+MLQ  +  P + ++GA +++ +     I+  + L ++  +RG+L S L M   KT S++  HP  LS  L+QY+K QS   T
Sbjct:    1 MAATLCCRLLPKAGWVPL----TQSVRHGSKAVTRHKKPVHFQKQKLLAVTEYIPPTLSAPPAALAPRVKKTGEESSLAV------------MLRKDLENLFQEYKMIAVAQNNAISAEDMIHLKHRLKKHAINVKFFPNQVTRSFLNSSIYGNMSPLIFGET-----VLLASKEPKVKEMLQALRHNPQIVLLGACIENTLFSYQGILSYSKLPSIAIIRGELVSGLTMMTSKTVSMLHHHPAHLSALLQQYVKQQSSADT 241          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|124053348|sp|Q3TBW2.2|RM10_MOUSE (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor)

HSP 1 Score: 68.5514 bits (166), Expect = 1.923e-12
Identity = 43/135 (31.85%), Postives = 73/135 (54.07%), Query Frame = 0
Query:  129 RRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS-GDTTVS 262
            R+ ++ +K +  Q+ +  L  +K+ NLL  +   V    L   +E  VK+M++  K  P L ++G  +DD I+ R  +++ A L +LD L+GQL   L     +T  L+   P  L+  L+QY+K+Q+ GD   S
Sbjct:  117 RKHKIFIKVFPSQVLKPFLENSKYRNLLPLF---VGHNLLLVSEEPKVKEMVRVLKSVPFLPLLGGCVDDTILSRQGLVDYAKLPSLDQLQGQLVGGLTHLMAQTRYLLQHQPVQLTSLLDQYVKEQNEGDCATS 248          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|124053346|sp|Q3MHY7.2|RM10_BOVIN (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor)

HSP 1 Score: 68.1662 bits (165), Expect = 2.362e-12
Identity = 64/256 (25.00%), Postives = 109/256 (42.58%), Query Frame = 0
Query:   15 GVAWGSSAGLSTSAGRA--------SSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQ-SGDTTV 261
             VA     GL   AGR          S+   +H     F+R KL+ V+E  +  P P         PR      +   E      ++  RE+  +   + M+ +     ++           R+ ++ +K +  QI +  L  +K++NLL  +   V    L   +E  VK+M++  K  P L ++G  +DD I+ R   +  + L +L   +G+L   L +   +T SL+  HP  L+  L+QY + Q  GD  V
Sbjct:    4 AVAGMLRGGLLPQAGRLPTHQFIRYGSKAVTRHRRVMHFERQKLMAVTE--YIAPKPVVN------PRCLPPPPSPPQEETG-LIRLLRREIAAVFRDNRMIAVCQNVAMSAEDKLLMRHQLRKHKILMKVFPNQILKPFLEDSKYQNLLPLF---VGHNLLLVSEEPKVKEMVRILKSVPFLPLLGGCIDDTILSRQGFINYSKLPSLALAQGELVGGLTLLTARTHSLLQHHPLQLTALLDQYARQQHEGDPVV 247          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|124053349|sp|P0C2C4.1|RM10_RAT (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; AltName: Full=MRP-L8; Flags: Precursor)

HSP 1 Score: 67.3958 bits (163), Expect = 5.269e-12
Identity = 58/234 (24.79%), Postives = 103/234 (44.02%), Query Frame = 0
Query:   30 RASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQ-SGDTTVS 262
            R  S+   +H     F R KL+ ++E  +  P P         PR          E +    ++  R++  +   + M+ +     L+           R+ ++ +K +  Q+ +  L  +K++NLL  +   V    L   +E  VK+M++  K  P L ++G  +DD I+ R   +E A L +LD L+G+L   L     +T  L+   P  L+  L+QY++ Q  GD   S
Sbjct:   28 RHGSKAVTRHRRVMHFQRQKLMAITE--YIPPRPAVS------PRCLPPPPKPPKEESG-LIRLLRRDIAAVFRDNRMIAVCQNVALSAEDKLLLRHQLRKHKIFIKVFPSQVLKPFLEDSKYQNLLPLF---VGHNLLLVSEEPKVKEMVRILKSVPFLPLLGGCIDDTILSRQGFVEYAKLPSLDRLQGELVGGLTHLTAQTRYLLQHQPVQLTSLLDQYVRQQHEGDCATS 249          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|215274216|sp|Q7Z7H8.3|RM10_HUMAN (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; AltName: Full=39S ribosomal protein L8, mitochondrial; Short=L8mt; Short=MRP-L8; AltName: Full=Mitochondrial large ribosomal subunit protein uL10m; Flags: Precursor)

HSP 1 Score: 61.2326 bits (147), Expect = 7.703e-10
Identity = 40/170 (23.53%), Postives = 83/170 (48.82%), Query Frame = 0
Query:   92 KIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTV 261
            ++  RE+  + + + M+ +     L+           R+ ++ +K +  Q+ +  L  +K++NLL  +   V    L   +E  VK+M++  +  P L ++G  +DD I+ R   +  + L +L  ++G+L   L     +T SL+   P  L+  L+QY+++Q    +V
Sbjct:   80 RLLRREIAAVFQDNRMIAVCQNVALSAEDKLLMRHQLRKHKILMKVFPNQVLKPFLEDSKYQNLLPLF---VGHNMLLVSEEPKVKEMVRILRTVPFLPLLGGCIDDTILSRQGFINYSKLPSLPLVQGELVGGLTCLTAQTHSLLQHQPLQLTTLLDQYIREQREKDSV 246          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|290563044|gb|ADD38916.1| (39S ribosomal protein L10, mitochondrial [Lepeophtheirus salmonis])

HSP 1 Score: 166.777 bits (421), Expect = 2.117e-47
Identity = 94/230 (40.87%), Postives = 136/230 (59.13%), Query Frame = 0
Query:   32 SSRPSIQHPHHPSFDRLKLLTVSEPRHSVPH----PTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256
            S R SI     PSF R KLL  S P  S P     PTTE ++  C    +     E    N  E ++ +++ EL   SP++G YH N L+Y      +QNARR  +ELK YN +  +AVL GTKWE  L+F E+  ++QY+TFG +I  +  +++FEKK P L +IGA+  D+I+ R +++++++L ++  L  QL SIL  P R+T S +G     LSQNL Q++KDQS
Sbjct:   13 SRRVSIPKAREPSFFRRKLLAFSAP--SYPQDDVSPTTERIWEKCSLSND--KMVERHVPNELEILYGQQMLELFSSSPVIGFYHINYLSYDNKLINWQNARRLDMELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 238          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|290462671|gb|ADD24383.1| (39S ribosomal protein L10, mitochondrial [Lepeophtheirus salmonis])

HSP 1 Score: 166.777 bits (421), Expect = 2.187e-47
Identity = 97/241 (40.25%), Postives = 141/241 (58.51%), Query Frame = 0
Query:   21 SAGLSTSAGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPH----PTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256
            S G+ T +   S R SI     PSF R KLL  S P  S P     PTTE ++  C    +     E    N  E ++ +++ EL   SP++G YH N L+Y      +QNARR  +ELK YN +  +AVL GTKWE  L+F E+  ++QY+TFG +I  +  +++FEKK P L +IGA+  D+I+ R +++++++L ++  L  QL SIL  P R+T S +G     LSQNL Q++KDQS
Sbjct:    4 SLGIPTRS--MSRRVSIPKAREPSFFRRKLLAFSAP--SYPQDDVSPTTERIWEKCSLSND--KMVERHVPNELEILYGQQMLELFSSSPVIGFYHINYLSYDNKLINWQNARRLDMELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGPDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 238          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|290561395|gb|ADD38098.1| (39S ribosomal protein L10, mitochondrial [Lepeophtheirus salmonis])

HSP 1 Score: 166.777 bits (421), Expect = 2.359e-47
Identity = 94/230 (40.87%), Postives = 136/230 (59.13%), Query Frame = 0
Query:   32 SSRPSIQHPHHPSFDRLKLLTVSEPRHSVPH----PTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256
            S R SI     PSF R KLL  S P  S P     PTTE ++  C    +     E    N  E ++ +++ EL   SP++G YH N L+Y      +QNARR  +ELK YN +  +AVL GTKWE  L+F E+  ++QY+TFG +I  +  +++FEKK P L +IGA+  D+I+ R +++++++L ++  L  QL SIL  P R+T S +G     LSQNL Q++KDQS
Sbjct:   13 SRRVSIPKAREPSFFRRKLLAFSAP--SYPQDDVSPTTERIWEKCSLSND--KMVERHVLNELEILYGQQMLELFSSSPVIGFYHINYLSYDNKLINWQNARRLDMELKDYNQRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIHVLYSQLASILTSPQRQTLSYLGNGASGLSQNLSQFLKDQS 238          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|225713836|gb|ACO12764.1| (39S ribosomal protein L10, mitochondrial precursor [Lepeophtheirus salmonis])

HSP 1 Score: 166.392 bits (420), Expect = 4.135e-47
Identity = 94/230 (40.87%), Postives = 136/230 (59.13%), Query Frame = 0
Query:   32 SSRPSIQHPHHPSFDRLKLLTVSEPRHSVPH----PTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256
            S R SI     PSF R KLL  S P  S P     PTTE ++  C    +     E    N  E ++ +++ EL   SP++G YH N L+Y      +QNARR  +ELK YN +  +AVL GTKWE  L+F E+  ++QY+TFG +I  +  +++FEKK P L +IGA+  D+I+ R +++++++L ++  L  QL SIL  P R+T S +G     LSQNL Q++KDQS
Sbjct:   13 SRRVSIPKAREPSFFRRKLLAFSAP--SYPQDDVSPTTERIWEKCSLSND--KMVERHVPNELEILYGQQMLELFSSSPVIGFYHINYLSYDNKLINWQNARRLDMELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGPDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 238          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1325272710|ref|XP_023320987.1| (uncharacterized protein LOC111695780 [Eurytemora affinis])

HSP 1 Score: 129.798 bits (325), Expect = 2.811e-33
Identity = 81/218 (37.16%), Postives = 123/218 (56.42%), Query Frame = 0
Query:   50 LLTVSEPRHSVPHPTTETLYRDCPRETELAANAE-----LESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSD---QYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDT 259
            +L +S+PR       TE L  D  R  E A   +     L   N  E  + RE+ E+ E+S MV  +HAN L     R A+QN RR  +ELK Y++++G+A L+GT+WEN L FW     D   Q + F  E++  ++L++E+K P   +IG ++++RI+ R E+ E+  L +LD  RG+L SIL    ++T  L+  + Q LS NL Q +KD S  +
Sbjct:    1 MLEISKPRWD-----TEDLIDDVWRSCEYARKEDEREMYLNEVNQLEIFYVREMVEMFERSKMVAFFHANPLKKNKFRIAWQNGRRVGMELKEYHHRVGKAGLQGTQWENCLQFWFKFPGDMNLQPILFSPEVDPAKLLKYERKVPEFTLIGCVVENRILSRRELQEMVKLPSLDQSRGELLSILGHQQQRTLQLLQSNQQQLSTNLSQIIKDASSSS 213          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1229725427|ref|XP_022125441.1| (39S ribosomal protein L10, mitochondrial [Pieris rapae])

HSP 1 Score: 116.316 bits (290), Expect = 1.169e-27
Identity = 69/232 (29.74%), Postives = 120/232 (51.72%), Query Frame = 0
Query:   28 AGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWE--NLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSG 257
            A R   + +IQ P  P F++  L+ +++P +  P  T    Y  C ++       E++  NP+E+I ARE  E    S MV   H N++T       +   ++  + L++Y  +I      GT++E  N L+      S Q + FGQ  N  +M +  KKAP L ++  +++DR++ + E++E + L NL+  R QLCS+LQ       S + ++ Q L  +LE++++ QS 
Sbjct:   18 ARRFRGKINIQKPKKPHFEKQLLIDITQPTYGPPKSTLPQ-YAFCNKDKPTFTKKEID--NPFERILARECLEWFNTSKMVVFLHLNSITMEDKTPIFAALKKNDMHLRTYGKKIMSMATTGTRYEVVNQLF-----TSHQNVIFGQPKNAHKMFKILKKAPQLVVMAGIIEDRMMSKNELLEFSNLPNLEVARSQLCSVLQSAGSCLVSQLNQNQQILVSHLEKHIEMQSS 241          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1344799385|ref|XP_023942081.1| (39S ribosomal protein L10, mitochondrial [Bicyclus anynana])

HSP 1 Score: 111.694 bits (278), Expect = 7.604e-26
Identity = 67/232 (28.88%), Postives = 115/232 (49.57%), Query Frame = 0
Query:   30 RASSRPSIQHPHHPSFDRLKLLTVSEPRHSVP-HPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTT 260
            R   + +IQ P  P F R  L+ +S+P    P H   E +   C +  +  A  E++  NP+E+I A E       S MV   H N++        Y   ++  + L++Y  +I      GT++E +   +    S Q + FGQ  N  +M +  KKAP L ++  +++D+++ + E++E + L NLD  R QLCS+LQ         + ++ Q L  +LE+++  Q+  TT
Sbjct:   20 RFRGKINIQKPRKPHFGRQILIDISKPHFGPPKHLLPEIM--KCEKIKDTIAKMEID--NPFERILANECLNWFNTSKMVVFLHVNSINMEDKTPIYAALKKNDMHLRTYGKKIVSMATTGTRYEAVNQLF---TSHQNIIFGQPENAAKMFKILKKAPQLVVMAGIIEDKLLSKNELVEFSKLPNLDVARSQLCSVLQSAGSCLVGQLNQNQQMLVSHLEKHISIQNSPTT 244          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|768427133|ref|XP_011554640.1| (PREDICTED: 39S ribosomal protein L10, mitochondrial [Plutella xylostella])

HSP 1 Score: 110.153 bits (274), Expect = 2.476e-25
Identity = 67/237 (28.27%), Postives = 122/237 (51.48%), Query Frame = 0
Query:   28 AGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVP-HPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTVSK 263
            + R   + +IQ P    +D+  LL +++P +  P H  TE     C +       AE++  NP+E+I A+E  +    S MV   H N++        Y + +R ++ ++ Y  +I      GT++E + + +   VS Q L FGQ  N+ ++L+  KKAP + ++  +++DR++ + E+ME + L N+D  R QLCS+LQ         + +  Q L  +L+++ +  SG +   K
Sbjct:   18 SKRFRGKINIQKPRPAHYDKQLLLDLTQPIYRPPKHEKTEISL--CTKGVSKWNKAEID--NPFERILAKECLDWFNTSKMVVFLHMNSINMEDKLPIYASLKRNKMTMRRYGKKIISMATTGTRYEAVQHLF---VSQQELIFGQPENIGKLLKILKKAPQMVVLAGIIEDRLMSKNELMEFSQLPNIDVARSQLCSVLQSAGSSIVGQLQQSQQMLVGHLDKHAEMLSGSSQQEK 247          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|909557552|ref|XP_013133748.1| (PREDICTED: uncharacterized protein LOC106099685 [Papilio polytes])

HSP 1 Score: 107.071 bits (266), Expect = 3.214e-24
Identity = 65/232 (28.02%), Postives = 121/232 (52.16%), Query Frame = 0
Query:   28 AGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDT 259
            A R   + +IQ P  P F+R  L+ +++P +  P  T   +   C   T    N +L   NP+E+I A+E  +    S MV   H N+++       +   R+  ++L++Y  +I +    GT++E +   +    S Q L FGQ  +  +M +  KKAP L ++ A+++DR++ + E++E + L N+D  R QLC +LQ  A      + +  Q L  +LE++++ ++ ++
Sbjct:   18 ARRFRGKINIQKPRKPHFERQLLIDLTKPYYGPPKYTLPDVVL-CDNTT--TENKKLID-NPFERILAKECLDWFNTSKMVVFLHLNSISMEDKTPIFAALRKNNMQLRTYGKKIVKMATTGTRYEAVNCLFN---SHQNLIFGQPESADKMFKILKKAPQLVVMAAIIEDRLLSKNELVEFSKLPNIDMARSQLCGVLQSAASCLVGQLNQSQQTLVSHLEKHVEIKNNNS 242          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|943977415|ref|XP_014369765.1| (PREDICTED: 39S ribosomal protein L10, mitochondrial [Papilio machaon] >gi|930665325|gb|KPJ06454.1| 39S ribosomal protein L10, mitochondrial [Papilio machaon])

HSP 1 Score: 106.686 bits (265), Expect = 4.267e-24
Identity = 63/232 (27.16%), Postives = 119/232 (51.29%), Query Frame = 0
Query:   28 AGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDT 259
            A R   + +IQ P  P F+R  L+ +++P    P  T   +   C + T      + E  NP+E+I A+E  +    S MV   H N+++       +   R+ ++ L++Y  +I +    GT++E +   +    S Q + FGQ  +  +M +  KKAP L ++  +++DR++ + E++E + L N+D  R QLC +LQ  A      + +  Q L  +LE++++ ++ +T
Sbjct:   18 ARRFRGKINIQKPRKPHFERQLLIDLTKPYFGPPKYTLPDVVL-CDKAT---TEHKKEIDNPFERILAKECLDWFNTSKMVVFLHLNSISMEDKTPIFAALRKNKMHLRTYGKKIVKMATTGTRYEAVNCLFN---SHQNIIFGQPESADKMFKILKKAPQLVVMAGIIEDRLMSKNELVEFSKLPNIDMARSQLCGVLQSAASCLVGQLNQSQQTLVSHLEKHVEIKNSET 242          
The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000056147.064e-3244.80supercontig:LSalAtl2s:LSalAtl2s3012:1:1104:1 gene:... [more]
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BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
gi|121995499|sp|Q29NV5.1|RM10_DROPS3.397e-1925.11RecName: Full=39S ribosomal protein L10, mitochond... [more]
gi|74870265|sp|Q9VPL3.1|RM10_DROME4.197e-1522.65RecName: Full=39S ribosomal protein L10, mitochond... [more]
gi|82178554|sp|Q5BJB7.1|RM10_DANRE1.989e-1424.81RecName: Full=39S ribosomal protein L10, mitochond... [more]
gi|124053348|sp|Q3TBW2.2|RM10_MOUSE1.923e-1231.85RecName: Full=39S ribosomal protein L10, mitochond... [more]
gi|124053346|sp|Q3MHY7.2|RM10_BOVIN2.362e-1225.00RecName: Full=39S ribosomal protein L10, mitochond... [more]
gi|124053349|sp|P0C2C4.1|RM10_RAT5.269e-1224.79RecName: Full=39S ribosomal protein L10, mitochond... [more]
gi|215274216|sp|Q7Z7H8.3|RM10_HUMAN7.703e-1023.53RecName: Full=39S ribosomal protein L10, mitochond... [more]
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BLAST of 39s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|290563044|gb|ADD38916.1|2.117e-4740.8739S ribosomal protein L10, mitochondrial [Lepeopht... [more]
gi|290462671|gb|ADD24383.1|2.187e-4740.2539S ribosomal protein L10, mitochondrial [Lepeopht... [more]
gi|290561395|gb|ADD38098.1|2.359e-4740.8739S ribosomal protein L10, mitochondrial [Lepeopht... [more]
gi|225713836|gb|ACO12764.1|4.135e-4740.8739S ribosomal protein L10, mitochondrial precursor... [more]
gi|1325272710|ref|XP_023320987.1|2.811e-3337.16uncharacterized protein LOC111695780 [Eurytemora a... [more]
gi|1229725427|ref|XP_022125441.1|1.169e-2729.7439S ribosomal protein L10, mitochondrial [Pieris r... [more]
gi|1344799385|ref|XP_023942081.1|7.604e-2628.8839S ribosomal protein L10, mitochondrial [Bicyclus... [more]
gi|768427133|ref|XP_011554640.1|2.476e-2528.27PREDICTED: 39S ribosomal protein L10, mitochondria... [more]
gi|909557552|ref|XP_013133748.1|3.214e-2428.02PREDICTED: uncharacterized protein LOC106099685 [P... [more]
gi|943977415|ref|XP_014369765.1|4.267e-2427.16PREDICTED: 39S ribosomal protein L10, mitochondria... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold170_size291898supercontigscaffold170_size291898:152598..154620 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold170_size291898-snap-gene-1.44-mRNA-1maker-scaffold170_size291898-snap-gene-1.44-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold170_size291898:152598..154620+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold170_size291898-snap-gene-1.44 ID=maker-scaffold170_size291898-snap-gene-1.44|Name=39s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=2023bp|location=Sequence derived from alignment at scaffold170_size291898:152598..154620+ (Tigriopus kingsejongensis)
TCTCATGCCCTCGATTGTCCCAAGTCGGAGGTAACCCGTCAAGATGGCTT CACGTGAGTGTCCCACCCGTTTGGGTGACGAGTGGATCCGCTCTCAGTCT GGTCCATTTCAGTTTCCGCCGCCCTCATTCTGCGGGCTCGGCCGGGCGTG GCGTGGGGTTCGAGTGCCGGTCTCAGCACGAGTGCGGGTCGAGCCTCGTC CCGTCCGTCTATCCAGCATCCTCATCACCCCTCTTTCGATCGCCTCAAGC TGCTGACTGTGAGTGAGCCCCGTCATTCGGTCCCTCATCCCACCACGGAG ACGCTCTACCGCGACTGTCCTCGTGAAACCGAACTAGCGGCCAATGCGGA ATTGGAGTCAGCCAATCCTTATGAAAAGATTTTCGCCCGCGAATTGCGGG AGCTCCTCGAGCAGAGTCCCATGGTGGGCCTGTACCACGCCAACAACCTC ACTTACTACCCTGCTCGAACCGTGAGTTGACCCCAGCCAATGACTGGACC ATGGGCCGTCCGCAAGGGCCGCTGGGGACTCGGGCTAAATGGGAACAGTG GTCCCATCTGGCCTATACGTATACTGATCGACACAGATTATTCGGGAAAA GTTTCAGGCACACTCGCCACCTTTCCAGCCTTTGAGGTCGCGAGGATGTC AACCATCCGGGTCTATGTACTGTTATGGAGTGGCCTTTCAGGGGGTGGCC AGCGATCCCTGATCAGGCCATTGGGCCCGGAAATGAGCTCATCGAGCACC TATCCTGGCTGGCTTAGCGTTGGCTGAGAACCCAACCTGTGAAAGATGCA CCTTTATCCAATTGGCAGGCTGTACTTATCAGTCCATAGCATATGGACTG AAAAGACAGCCCTCCGGAATCGAAAGCGGGCAATTTGGAGATATGCCTGC CTGCTATGACACTGAGTTGGTCTCAAAAACTGTCCAATCAGGGGCAATCC AACGCTAATGGGTGACAGATTGACACTCACGACCCTGGTTAAGTAAGTTA GCTACATAGCAGTACATAACTCAGTCTCGTTGGCATCCCGGCGATCGTGG TCCAGTGCGACCATGGTTGTTCTTTAGGGGGTAGGAATTTGCCCGATTAG TATACGTATAGGCATAACTGTATCACCCGGGAGTCTGGAACCAACTAAGT TATGAGACAATGAGTCCTTTCACCGGACCATTACTCATTGTAACTAGGGG TCGGAAAGCATTTTGAAACACTTATTGCAAGTCCAGTTTTGAATTCAGTC GCACTTTGGCAAACTTGAGCCAACTTGAATGCCATTTCTTACCAATTTTC CTTTGCGGCTGGACTCCTGCCTCCGTTTGGTCCAGCTTGTTTTACTCATC ACAACTCGTGCTCCATTCTTGTCCTTTGGTTTTTTTGCATCTAGTCGGCT GATGAAAATATGCCGAATTGCCAGGCATTTAATTTTTTTGAATATCTCGC GGAATAAAACCTACTGCTTTTTCATTTATAAAAGGGAAGCCCAGTTTGAA TTCTGGGTTGTCTCTTCCTAGGCTTATCAAAATGCCCGGCGTTGTCAACT GGAACTCAAATCGTACAATTATCAGATTGGCGAAGCGGTTTTGCGGGGGA CCAAATGGGAGAATCTGCTGTACTTTTGGGAGACGGGTGTCTCGGACCAA TACTTGACCTTTGGCCAGGAGATCAATGTCAAGCAAATGCTTCAATTCGA AAAGAAAGCTCCCGCGCTCTTCATCATCGGTAATTAATACCCCTTCCAAC CTCACCGTGAAGGCAAATTCAGCCGCTACGCTATTTTGCAGGTGCCCTAC TGGACGATCGGATAGTGGACCGTGGTGAAATCATGGAATTGGCCGCACTG TCCAACCTGGACGACCTTCGAGGTCAATTGTGCTCGATCTTGCAGATGCC GGCCAGGAAAACGTCTTCCCTCATCGGTCGCCATCCGCAAGCTCTATCTC AGAATCTGGAGCAATATATGAAAGATCAATCGGGGGACACCACTGTCTCG AAATAAACCCGCACTCCCGGCTG
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Synonyms
The feature '39s ribosomal protein mitochondrial' has the following synonyms
Synonym
Tk03011
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