39s ribosomal protein mitochondrial, maker-scaffold170_size291898-snap-gene-1.44 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Match: EMLSAG00000005614 (supercontig:LSalAtl2s:LSalAtl2s3012:1:1104:1 gene:EMLSAG00000005614 transcript:EMLSAT00000005614 description:"maker-LSalAtl2s3012-augustus-gene-0.6") HSP 1 Score: 113.235 bits (282), Expect = 7.064e-32 Identity = 56/125 (44.80%), Postives = 86/125 (68.80%), Query Frame = 0 Query: 133 LELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256 +ELK YN + +AVL GTKWE L+F E+ ++QY+TFG +I + +++FEKK P L +IGA+ D+I+ R +++++++L ++ L QL SIL P R+T S +G LSQNL Q++KDQS Sbjct: 1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 125
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|121995499|sp|Q29NV5.1|RM10_DROPS (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor) HSP 1 Score: 87.0409 bits (214), Expect = 3.397e-19 Identity = 59/235 (25.11%), Postives = 114/235 (48.51%), Query Frame = 0 Query: 30 RASSRPSIQHPHHPSFDRLKLLTVSEPRH-SVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFG-QEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTVS 262 R + +IQ P P ++R +++ V++P++ +P R C + +LE NPY +I ARE+R L S +V ++H N++T + L LKSY +I + + GT +E ++ + S+ + F + + +L+ ++ P + ++G +++ ++ R E+M A + NL + QL L + A + + H L Q L+ + K +GDT + Sbjct: 23 RFRGKINIQRPKEPHYERARVVAVTQPKYPELPKA------RSCFQTRAERTKEQLE--NPYNEIIAREVRNWLNHSQLVAIFHLNSITADEIFRVRVQLHKQNLHLKSYGRKIIDQAVTGTPYEAIMPLFH---SNHCIVFSPNQQQIGALLKITRRVPQMVLLGGIVEKTLLSRNELMAYAQMPNLQGAQAQLVQTLNLAAGQLVQHLQTHQANLVQVLDVHAKG-NGDTNTN 245
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|74870265|sp|Q9VPL3.1|RM10_DROME (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor) HSP 1 Score: 75.8702 bits (185), Expect = 4.197e-15 Identity = 53/234 (22.65%), Postives = 114/234 (48.72%), Query Frame = 0 Query: 30 RASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPH-PTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSIL-QMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTT 260 R + +IQ P P ++R +++ V++P++ P P ++ ++ A + + NPY +I ARE+R L+ S +V +H +++T + L LKSY +I E ++ T++E ++ + S+ + F + +L+ ++ P + ++G ++++ ++ R +++ A + L ++ QL L Q P L H + Q L+ + K+Q + T Sbjct: 23 RFRGKINIQRPKAPHYERARVVAVTQPKY--PELPKAKSCFKT------RAERTQQQQENPYNEIIAREVRNWLDHSRLVAFFHLSSITADDIFRVRVQLHKQNLHLKSYGSKIIEQAVKNTRYEAIVPLFH---SNHCIVFSPDPEKTAALLRIVRRVPQMVLLGGIVEETMLSRNQLVAYAQMPGLHAVQAQLVQTLSQAPGHLIQQLQA-HQNSFVQVLDVHAKNQMNEET 244
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|82178554|sp|Q5BJB7.1|RM10_DANRE (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor) HSP 1 Score: 73.9442 bits (180), Expect = 1.989e-14 Identity = 65/262 (24.81%), Postives = 113/262 (43.13%), Query Frame = 0 Query: 4 LSAALILRARPGVAWGSSAGLSTSAGRASSRPSIQHPHHPSFDRLKLLTVSE---PRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENL--LYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTT 260 ++A L R P W T + R S+ +H F + KLL V+E P S P + E+ LA + ++L L ++ M+ + N ++ ++ + +K + Q+ + L + + N+ L F ET L +E VK+MLQ + P + ++GA +++ + I+ + L ++ +RG+L S L M KT S++ HP LS L+QY+K QS T Sbjct: 1 MAATLCCRLLPKAGWVPL----TQSVRHGSKAVTRHKKPVHFQKQKLLAVTEYIPPTLSAPPAALAPRVKKTGEESSLAV------------MLRKDLENLFQEYKMIAVAQNNAISAEDMIHLKHRLKKHAINVKFFPNQVTRSFLNSSIYGNMSPLIFGET-----VLLASKEPKVKEMLQALRHNPQIVLLGACIENTLFSYQGILSYSKLPSIAIIRGELVSGLTMMTSKTVSMLHHHPAHLSALLQQYVKQQSSADT 241
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|124053348|sp|Q3TBW2.2|RM10_MOUSE (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor) HSP 1 Score: 68.5514 bits (166), Expect = 1.923e-12 Identity = 43/135 (31.85%), Postives = 73/135 (54.07%), Query Frame = 0 Query: 129 RRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS-GDTTVS 262 R+ ++ +K + Q+ + L +K+ NLL + V L +E VK+M++ K P L ++G +DD I+ R +++ A L +LD L+GQL L +T L+ P L+ L+QY+K+Q+ GD S Sbjct: 117 RKHKIFIKVFPSQVLKPFLENSKYRNLLPLF---VGHNLLLVSEEPKVKEMVRVLKSVPFLPLLGGCVDDTILSRQGLVDYAKLPSLDQLQGQLVGGLTHLMAQTRYLLQHQPVQLTSLLDQYVKEQNEGDCATS 248
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|124053346|sp|Q3MHY7.2|RM10_BOVIN (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor) HSP 1 Score: 68.1662 bits (165), Expect = 2.362e-12 Identity = 64/256 (25.00%), Postives = 109/256 (42.58%), Query Frame = 0 Query: 15 GVAWGSSAGLSTSAGRA--------SSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQ-SGDTTV 261 VA GL AGR S+ +H F+R KL+ V+E + P P PR + E ++ RE+ + + M+ + ++ R+ ++ +K + QI + L +K++NLL + V L +E VK+M++ K P L ++G +DD I+ R + + L +L +G+L L + +T SL+ HP L+ L+QY + Q GD V Sbjct: 4 AVAGMLRGGLLPQAGRLPTHQFIRYGSKAVTRHRRVMHFERQKLMAVTE--YIAPKPVVN------PRCLPPPPSPPQEETG-LIRLLRREIAAVFRDNRMIAVCQNVAMSAEDKLLMRHQLRKHKILMKVFPNQILKPFLEDSKYQNLLPLF---VGHNLLLVSEEPKVKEMVRILKSVPFLPLLGGCIDDTILSRQGFINYSKLPSLALAQGELVGGLTLLTARTHSLLQHHPLQLTALLDQYARQQHEGDPVV 247
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|124053349|sp|P0C2C4.1|RM10_RAT (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; AltName: Full=MRP-L8; Flags: Precursor) HSP 1 Score: 67.3958 bits (163), Expect = 5.269e-12 Identity = 58/234 (24.79%), Postives = 103/234 (44.02%), Query Frame = 0 Query: 30 RASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQ-SGDTTVS 262 R S+ +H F R KL+ ++E + P P PR E + ++ R++ + + M+ + L+ R+ ++ +K + Q+ + L +K++NLL + V L +E VK+M++ K P L ++G +DD I+ R +E A L +LD L+G+L L +T L+ P L+ L+QY++ Q GD S Sbjct: 28 RHGSKAVTRHRRVMHFQRQKLMAITE--YIPPRPAVS------PRCLPPPPKPPKEESG-LIRLLRRDIAAVFRDNRMIAVCQNVALSAEDKLLLRHQLRKHKIFIKVFPSQVLKPFLEDSKYQNLLPLF---VGHNLLLVSEEPKVKEMVRILKSVPFLPLLGGCIDDTILSRQGFVEYAKLPSLDRLQGELVGGLTHLTAQTRYLLQHQPVQLTSLLDQYVRQQHEGDCATS 249
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|215274216|sp|Q7Z7H8.3|RM10_HUMAN (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; AltName: Full=39S ribosomal protein L8, mitochondrial; Short=L8mt; Short=MRP-L8; AltName: Full=Mitochondrial large ribosomal subunit protein uL10m; Flags: Precursor) HSP 1 Score: 61.2326 bits (147), Expect = 7.703e-10 Identity = 40/170 (23.53%), Postives = 83/170 (48.82%), Query Frame = 0 Query: 92 KIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTV 261 ++ RE+ + + + M+ + L+ R+ ++ +K + Q+ + L +K++NLL + V L +E VK+M++ + P L ++G +DD I+ R + + L +L ++G+L L +T SL+ P L+ L+QY+++Q +V Sbjct: 80 RLLRREIAAVFQDNRMIAVCQNVALSAEDKLLMRHQLRKHKILMKVFPNQVLKPFLEDSKYQNLLPLF---VGHNMLLVSEEPKVKEMVRILRTVPFLPLLGGCIDDTILSRQGFINYSKLPSLPLVQGELVGGLTCLTAQTHSLLQHQPLQLTTLLDQYIREQREKDSV 246
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|290563044|gb|ADD38916.1| (39S ribosomal protein L10, mitochondrial [Lepeophtheirus salmonis]) HSP 1 Score: 166.777 bits (421), Expect = 2.117e-47 Identity = 94/230 (40.87%), Postives = 136/230 (59.13%), Query Frame = 0 Query: 32 SSRPSIQHPHHPSFDRLKLLTVSEPRHSVPH----PTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256 S R SI PSF R KLL S P S P PTTE ++ C + E N E ++ +++ EL SP++G YH N L+Y +QNARR +ELK YN + +AVL GTKWE L+F E+ ++QY+TFG +I + +++FEKK P L +IGA+ D+I+ R +++++++L ++ L QL SIL P R+T S +G LSQNL Q++KDQS Sbjct: 13 SRRVSIPKAREPSFFRRKLLAFSAP--SYPQDDVSPTTERIWEKCSLSND--KMVERHVPNELEILYGQQMLELFSSSPVIGFYHINYLSYDNKLINWQNARRLDMELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 238
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|290462671|gb|ADD24383.1| (39S ribosomal protein L10, mitochondrial [Lepeophtheirus salmonis]) HSP 1 Score: 166.777 bits (421), Expect = 2.187e-47 Identity = 97/241 (40.25%), Postives = 141/241 (58.51%), Query Frame = 0 Query: 21 SAGLSTSAGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPH----PTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256 S G+ T + S R SI PSF R KLL S P S P PTTE ++ C + E N E ++ +++ EL SP++G YH N L+Y +QNARR +ELK YN + +AVL GTKWE L+F E+ ++QY+TFG +I + +++FEKK P L +IGA+ D+I+ R +++++++L ++ L QL SIL P R+T S +G LSQNL Q++KDQS Sbjct: 4 SLGIPTRS--MSRRVSIPKAREPSFFRRKLLAFSAP--SYPQDDVSPTTERIWEKCSLSND--KMVERHVPNELEILYGQQMLELFSSSPVIGFYHINYLSYDNKLINWQNARRLDMELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGPDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 238
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|290561395|gb|ADD38098.1| (39S ribosomal protein L10, mitochondrial [Lepeophtheirus salmonis]) HSP 1 Score: 166.777 bits (421), Expect = 2.359e-47 Identity = 94/230 (40.87%), Postives = 136/230 (59.13%), Query Frame = 0 Query: 32 SSRPSIQHPHHPSFDRLKLLTVSEPRHSVPH----PTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256 S R SI PSF R KLL S P S P PTTE ++ C + E N E ++ +++ EL SP++G YH N L+Y +QNARR +ELK YN + +AVL GTKWE L+F E+ ++QY+TFG +I + +++FEKK P L +IGA+ D+I+ R +++++++L ++ L QL SIL P R+T S +G LSQNL Q++KDQS Sbjct: 13 SRRVSIPKAREPSFFRRKLLAFSAP--SYPQDDVSPTTERIWEKCSLSND--KMVERHVLNELEILYGQQMLELFSSSPVIGFYHINYLSYDNKLINWQNARRLDMELKDYNQRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIHVLYSQLASILTSPQRQTLSYLGNGASGLSQNLSQFLKDQS 238
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|225713836|gb|ACO12764.1| (39S ribosomal protein L10, mitochondrial precursor [Lepeophtheirus salmonis]) HSP 1 Score: 166.392 bits (420), Expect = 4.135e-47 Identity = 94/230 (40.87%), Postives = 136/230 (59.13%), Query Frame = 0 Query: 32 SSRPSIQHPHHPSFDRLKLLTVSEPRHSVPH----PTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256 S R SI PSF R KLL S P S P PTTE ++ C + E N E ++ +++ EL SP++G YH N L+Y +QNARR +ELK YN + +AVL GTKWE L+F E+ ++QY+TFG +I + +++FEKK P L +IGA+ D+I+ R +++++++L ++ L QL SIL P R+T S +G LSQNL Q++KDQS Sbjct: 13 SRRVSIPKAREPSFFRRKLLAFSAP--SYPQDDVSPTTERIWEKCSLSND--KMVERHVPNELEILYGQQMLELFSSSPVIGFYHINYLSYDNKLINWQNARRLDMELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGPDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 238
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1325272710|ref|XP_023320987.1| (uncharacterized protein LOC111695780 [Eurytemora affinis]) HSP 1 Score: 129.798 bits (325), Expect = 2.811e-33 Identity = 81/218 (37.16%), Postives = 123/218 (56.42%), Query Frame = 0 Query: 50 LLTVSEPRHSVPHPTTETLYRDCPRETELAANAE-----LESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSD---QYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDT 259 +L +S+PR TE L D R E A + L N E + RE+ E+ E+S MV +HAN L R A+QN RR +ELK Y++++G+A L+GT+WEN L FW D Q + F E++ ++L++E+K P +IG ++++RI+ R E+ E+ L +LD RG+L SIL ++T L+ + Q LS NL Q +KD S + Sbjct: 1 MLEISKPRWD-----TEDLIDDVWRSCEYARKEDEREMYLNEVNQLEIFYVREMVEMFERSKMVAFFHANPLKKNKFRIAWQNGRRVGMELKEYHHRVGKAGLQGTQWENCLQFWFKFPGDMNLQPILFSPEVDPAKLLKYERKVPEFTLIGCVVENRILSRRELQEMVKLPSLDQSRGELLSILGHQQQRTLQLLQSNQQQLSTNLSQIIKDASSSS 213
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1229725427|ref|XP_022125441.1| (39S ribosomal protein L10, mitochondrial [Pieris rapae]) HSP 1 Score: 116.316 bits (290), Expect = 1.169e-27 Identity = 69/232 (29.74%), Postives = 120/232 (51.72%), Query Frame = 0 Query: 28 AGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWE--NLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSG 257 A R + +IQ P P F++ L+ +++P + P T Y C ++ E++ NP+E+I ARE E S MV H N++T + ++ + L++Y +I GT++E N L+ S Q + FGQ N +M + KKAP L ++ +++DR++ + E++E + L NL+ R QLCS+LQ S + ++ Q L +LE++++ QS Sbjct: 18 ARRFRGKINIQKPKKPHFEKQLLIDITQPTYGPPKSTLPQ-YAFCNKDKPTFTKKEID--NPFERILARECLEWFNTSKMVVFLHLNSITMEDKTPIFAALKKNDMHLRTYGKKIMSMATTGTRYEVVNQLF-----TSHQNVIFGQPKNAHKMFKILKKAPQLVVMAGIIEDRMMSKNELLEFSNLPNLEVARSQLCSVLQSAGSCLVSQLNQNQQILVSHLEKHIEMQSS 241
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1344799385|ref|XP_023942081.1| (39S ribosomal protein L10, mitochondrial [Bicyclus anynana]) HSP 1 Score: 111.694 bits (278), Expect = 7.604e-26 Identity = 67/232 (28.88%), Postives = 115/232 (49.57%), Query Frame = 0 Query: 30 RASSRPSIQHPHHPSFDRLKLLTVSEPRHSVP-HPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTT 260 R + +IQ P P F R L+ +S+P P H E + C + + A E++ NP+E+I A E S MV H N++ Y ++ + L++Y +I GT++E + + S Q + FGQ N +M + KKAP L ++ +++D+++ + E++E + L NLD R QLCS+LQ + ++ Q L +LE+++ Q+ TT Sbjct: 20 RFRGKINIQKPRKPHFGRQILIDISKPHFGPPKHLLPEIM--KCEKIKDTIAKMEID--NPFERILANECLNWFNTSKMVVFLHVNSINMEDKTPIYAALKKNDMHLRTYGKKIVSMATTGTRYEAVNQLF---TSHQNIIFGQPENAAKMFKILKKAPQLVVMAGIIEDKLLSKNELVEFSKLPNLDVARSQLCSVLQSAGSCLVGQLNQNQQMLVSHLEKHISIQNSPTT 244
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|768427133|ref|XP_011554640.1| (PREDICTED: 39S ribosomal protein L10, mitochondrial [Plutella xylostella]) HSP 1 Score: 110.153 bits (274), Expect = 2.476e-25 Identity = 67/237 (28.27%), Postives = 122/237 (51.48%), Query Frame = 0 Query: 28 AGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVP-HPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTVSK 263 + R + +IQ P +D+ LL +++P + P H TE C + AE++ NP+E+I A+E + S MV H N++ Y + +R ++ ++ Y +I GT++E + + + VS Q L FGQ N+ ++L+ KKAP + ++ +++DR++ + E+ME + L N+D R QLCS+LQ + + Q L +L+++ + SG + K Sbjct: 18 SKRFRGKINIQKPRPAHYDKQLLLDLTQPIYRPPKHEKTEISL--CTKGVSKWNKAEID--NPFERILAKECLDWFNTSKMVVFLHMNSINMEDKLPIYASLKRNKMTMRRYGKKIISMATTGTRYEAVQHLF---VSQQELIFGQPENIGKLLKILKKAPQMVVLAGIIEDRLMSKNELMEFSQLPNIDVARSQLCSVLQSAGSSIVGQLQQSQQMLVGHLDKHAEMLSGSSQQEK 247
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|909557552|ref|XP_013133748.1| (PREDICTED: uncharacterized protein LOC106099685 [Papilio polytes]) HSP 1 Score: 107.071 bits (266), Expect = 3.214e-24 Identity = 65/232 (28.02%), Postives = 121/232 (52.16%), Query Frame = 0 Query: 28 AGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDT 259 A R + +IQ P P F+R L+ +++P + P T + C T N +L NP+E+I A+E + S MV H N+++ + R+ ++L++Y +I + GT++E + + S Q L FGQ + +M + KKAP L ++ A+++DR++ + E++E + L N+D R QLC +LQ A + + Q L +LE++++ ++ ++ Sbjct: 18 ARRFRGKINIQKPRKPHFERQLLIDLTKPYYGPPKYTLPDVVL-CDNTT--TENKKLID-NPFERILAKECLDWFNTSKMVVFLHLNSISMEDKTPIFAALRKNNMQLRTYGKKIVKMATTGTRYEAVNCLFN---SHQNLIFGQPESADKMFKILKKAPQLVVMAAIIEDRLLSKNELVEFSKLPNIDMARSQLCGVLQSAASCLVGQLNQSQQTLVSHLEKHVEIKNNNS 242
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|943977415|ref|XP_014369765.1| (PREDICTED: 39S ribosomal protein L10, mitochondrial [Papilio machaon] >gi|930665325|gb|KPJ06454.1| 39S ribosomal protein L10, mitochondrial [Papilio machaon]) HSP 1 Score: 106.686 bits (265), Expect = 4.267e-24 Identity = 63/232 (27.16%), Postives = 119/232 (51.29%), Query Frame = 0 Query: 28 AGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDT 259 A R + +IQ P P F+R L+ +++P P T + C + T + E NP+E+I A+E + S MV H N+++ + R+ ++ L++Y +I + GT++E + + S Q + FGQ + +M + KKAP L ++ +++DR++ + E++E + L N+D R QLC +LQ A + + Q L +LE++++ ++ +T Sbjct: 18 ARRFRGKINIQKPRKPHFERQLLIDLTKPYFGPPKYTLPDVVL-CDKAT---TEHKKEIDNPFERILAKECLDWFNTSKMVVFLHLNSISMEDKTPIFAALRKNKMHLRTYGKKIVKMATTGTRYEAVNCLFN---SHQNIIFGQPESADKMFKILKKAPQLVVMAGIIEDRLMSKNELVEFSKLPNIDMARSQLCGVLQSAASCLVGQLNQSQQTLVSHLEKHVEIKNSET 242 The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 7
BLAST of 39s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold170_size291898:152598..154620+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold170_size291898-snap-gene-1.44 ID=maker-scaffold170_size291898-snap-gene-1.44|Name=39s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=2023bp|location=Sequence derived from alignment at scaffold170_size291898:152598..154620+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '39s ribosomal protein mitochondrial' has the following synonyms
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