39s ribosomal protein mitochondrial, maker-scaffold170_size291898-snap-gene-1.44 (gene) Tigriopus kingsejongensis

Overview
Name39s ribosomal protein mitochondrial
Unique Namemaker-scaffold170_size291898-snap-gene-1.44
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Match: EMLSAG00000005614 (supercontig:LSalAtl2s:LSalAtl2s3012:1:1104:1 gene:EMLSAG00000005614 transcript:EMLSAT00000005614 description:"maker-LSalAtl2s3012-augustus-gene-0.6")

HSP 1 Score: 113.235 bits (282), Expect = 7.064e-32
Identity = 56/125 (44.80%), Postives = 86/125 (68.80%), Query Frame = 0 
Query:  133 LELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256
            +ELK YN +  +AVL GTKWE  L+F E+  ++QY+TFG +I  +  +++FEKK P L +IGA+  D+I+ R +++++++L ++  L  QL SIL  P R+T S +G     LSQNL Q++KDQS
Sbjct:    1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 125
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BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|121995499|sp|Q29NV5.1|RM10_DROPS (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor)

HSP 1 Score: 87.0409 bits (214), Expect = 3.397e-19
Identity = 59/235 (25.11%), Postives = 114/235 (48.51%), Query Frame = 0 
Query:   30 RASSRPSIQHPHHPSFDRLKLLTVSEPRH-SVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFG-QEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTVS 262
            R   + +IQ P  P ++R +++ V++P++  +P        R C +        +LE  NPY +I ARE+R  L  S +V ++H N++T            +  L LKSY  +I +  + GT +E ++  +    S+  + F   +  +  +L+  ++ P + ++G +++  ++ R E+M  A + NL   + QL   L + A +    +  H   L Q L+ + K  +GDT  +
Sbjct:   23 RFRGKINIQRPKEPHYERARVVAVTQPKYPELPKA------RSCFQTRAERTKEQLE--NPYNEIIAREVRNWLNHSQLVAIFHLNSITADEIFRVRVQLHKQNLHLKSYGRKIIDQAVTGTPYEAIMPLFH---SNHCIVFSPNQQQIGALLKITRRVPQMVLLGGIVEKTLLSRNELMAYAQMPNLQGAQAQLVQTLNLAAGQLVQHLQTHQANLVQVLDVHAKG-NGDTNTN 245
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BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|74870265|sp|Q9VPL3.1|RM10_DROME (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor)

HSP 1 Score: 75.8702 bits (185), Expect = 4.197e-15
Identity = 53/234 (22.65%), Postives = 114/234 (48.72%), Query Frame = 0 
Query:   30 RASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPH-PTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSIL-QMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTT 260
            R   + +IQ P  P ++R +++ V++P++  P  P  ++ ++        A   + +  NPY +I ARE+R  L+ S +V  +H +++T            +  L LKSY  +I E  ++ T++E ++  +    S+  + F  +      +L+  ++ P + ++G ++++ ++ R +++  A +  L  ++ QL   L Q P      L   H  +  Q L+ + K+Q  + T
Sbjct:   23 RFRGKINIQRPKAPHYERARVVAVTQPKY--PELPKAKSCFKT------RAERTQQQQENPYNEIIAREVRNWLDHSRLVAFFHLSSITADDIFRVRVQLHKQNLHLKSYGSKIIEQAVKNTRYEAIVPLFH---SNHCIVFSPDPEKTAALLRIVRRVPQMVLLGGIVEETMLSRNQLVAYAQMPGLHAVQAQLVQTLSQAPGHLIQQLQA-HQNSFVQVLDVHAKNQMNEET 244
[Close]
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|82178554|sp|Q5BJB7.1|RM10_DANRE (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor)

HSP 1 Score: 73.9442 bits (180), Expect = 1.989e-14
Identity = 65/262 (24.81%), Postives = 113/262 (43.13%), Query Frame = 0 
Query:    4 LSAALILRARPGVAWGSSAGLSTSAGRASSRPSIQHPHHPSFDRLKLLTVSE---PRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENL--LYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTT 260
            ++A L  R  P   W       T + R  S+   +H     F + KLL V+E   P  S P        +    E+ LA             +  ++L  L ++  M+ +   N ++           ++  + +K +  Q+  + L  + + N+  L F ET      L   +E  VK+MLQ  +  P + ++GA +++ +     I+  + L ++  +RG+L S L M   KT S++  HP  LS  L+QY+K QS   T
Sbjct:    1 MAATLCCRLLPKAGWVPL----TQSVRHGSKAVTRHKKPVHFQKQKLLAVTEYIPPTLSAPPAALAPRVKKTGEESSLAV------------MLRKDLENLFQEYKMIAVAQNNAISAEDMIHLKHRLKKHAINVKFFPNQVTRSFLNSSIYGNMSPLIFGET-----VLLASKEPKVKEMLQALRHNPQIVLLGACIENTLFSYQGILSYSKLPSIAIIRGELVSGLTMMTSKTVSMLHHHPAHLSALLQQYVKQQSSADT 241
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BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|124053348|sp|Q3TBW2.2|RM10_MOUSE (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor)

HSP 1 Score: 68.5514 bits (166), Expect = 1.923e-12
Identity = 43/135 (31.85%), Postives = 73/135 (54.07%), Query Frame = 0 
Query:  129 RRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS-GDTTVS 262
            R+ ++ +K +  Q+ +  L  +K+ NLL  +   V    L   +E  VK+M++  K  P L ++G  +DD I+ R  +++ A L +LD L+GQL   L     +T  L+   P  L+  L+QY+K+Q+ GD   S
Sbjct:  117 RKHKIFIKVFPSQVLKPFLENSKYRNLLPLF---VGHNLLLVSEEPKVKEMVRVLKSVPFLPLLGGCVDDTILSRQGLVDYAKLPSLDQLQGQLVGGLTHLMAQTRYLLQHQPVQLTSLLDQYVKEQNEGDCATS 248
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BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|124053346|sp|Q3MHY7.2|RM10_BOVIN (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor)

HSP 1 Score: 68.1662 bits (165), Expect = 2.362e-12
Identity = 64/256 (25.00%), Postives = 109/256 (42.58%), Query Frame = 0 
Query:   15 GVAWGSSAGLSTSAGRA--------SSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQ-SGDTTV 261
             VA     GL   AGR          S+   +H     F+R KL+ V+E  +  P P         PR      +   E      ++  RE+  +   + M+ +     ++           R+ ++ +K +  QI +  L  +K++NLL  +   V    L   +E  VK+M++  K  P L ++G  +DD I+ R   +  + L +L   +G+L   L +   +T SL+  HP  L+  L+QY + Q  GD  V
Sbjct:    4 AVAGMLRGGLLPQAGRLPTHQFIRYGSKAVTRHRRVMHFERQKLMAVTE--YIAPKPVVN------PRCLPPPPSPPQEETG-LIRLLRREIAAVFRDNRMIAVCQNVAMSAEDKLLMRHQLRKHKILMKVFPNQILKPFLEDSKYQNLLPLF---VGHNLLLVSEEPKVKEMVRILKSVPFLPLLGGCIDDTILSRQGFINYSKLPSLALAQGELVGGLTLLTARTHSLLQHHPLQLTALLDQYARQQHEGDPVV 247
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BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|124053349|sp|P0C2C4.1|RM10_RAT (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; AltName: Full=MRP-L8; Flags: Precursor)

HSP 1 Score: 67.3958 bits (163), Expect = 5.269e-12
Identity = 58/234 (24.79%), Postives = 103/234 (44.02%), Query Frame = 0 
Query:   30 RASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQ-SGDTTVS 262
            R  S+   +H     F R KL+ ++E  +  P P         PR          E +    ++  R++  +   + M+ +     L+           R+ ++ +K +  Q+ +  L  +K++NLL  +   V    L   +E  VK+M++  K  P L ++G  +DD I+ R   +E A L +LD L+G+L   L     +T  L+   P  L+  L+QY++ Q  GD   S
Sbjct:   28 RHGSKAVTRHRRVMHFQRQKLMAITE--YIPPRPAVS------PRCLPPPPKPPKEESG-LIRLLRRDIAAVFRDNRMIAVCQNVALSAEDKLLLRHQLRKHKIFIKVFPSQVLKPFLEDSKYQNLLPLF---VGHNLLLVSEEPKVKEMVRILKSVPFLPLLGGCIDDTILSRQGFVEYAKLPSLDRLQGELVGGLTHLTAQTRYLLQHQPVQLTSLLDQYVRQQHEGDCATS 249
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BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|215274216|sp|Q7Z7H8.3|RM10_HUMAN (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; AltName: Full=39S ribosomal protein L8, mitochondrial; Short=L8mt; Short=MRP-L8; AltName: Full=Mitochondrial large ribosomal subunit protein uL10m; Flags: Precursor)

HSP 1 Score: 61.2326 bits (147), Expect = 7.703e-10
Identity = 40/170 (23.53%), Postives = 83/170 (48.82%), Query Frame = 0 
Query:   92 KIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTV 261
            ++  RE+  + + + M+ +     L+           R+ ++ +K +  Q+ +  L  +K++NLL  +   V    L   +E  VK+M++  +  P L ++G  +DD I+ R   +  + L +L  ++G+L   L     +T SL+   P  L+  L+QY+++Q    +V
Sbjct:   80 RLLRREIAAVFQDNRMIAVCQNVALSAEDKLLMRHQLRKHKILMKVFPNQVLKPFLEDSKYQNLLPLF---VGHNMLLVSEEPKVKEMVRILRTVPFLPLLGGCIDDTILSRQGFINYSKLPSLPLVQGELVGGLTCLTAQTHSLLQHQPLQLTTLLDQYIREQREKDSV 246
[Close]
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1209689703|gb|OWR44560.1| (putative mitochondrial ribosomal protein L10 [Danaus plexippus plexippus])

HSP 1 Score: 104.76 bits (260), Expect = 3.078e-23
Identity = 57/229 (24.89%), Postives = 119/229 (51.97%), Query Frame = 0 
Query:   28 AGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256
            A R   + +IQ P  P F++  LL +++P +     +   ++  C +   L +  E++  NP+E+I ARE       S MV   H N+++       +   ++  + L++Y  +I     +GT++E + + +      Q + FGQ  N  +M +  KK P + ++  +++D+++ + E+++ + L +L+  R QLCS+LQ  A      + ++ Q L  +LE++++ Q+
Sbjct:   18 AKRFRGKVNIQKPRKPHFEKQLLLDLTKPHYGPKKSSLPDIFL-CDKGKVLFSKEEID--NPFERILARECLNWFNTSKMVVFLHMNSISMEDKTPVFAALKKNNMNLRTYGKKIVSMATKGTRYEAVNHLF---TCHQNIIFGQPENAAKMFKILKKTPQMVVMAGIINDKLLSKNELVQFSKLPSLEVARSQLCSVLQSAASCLVGQLNQNQQVLVSHLEKHIEVQN 240
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BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1274098225|ref|XP_022834372.1| (39S ribosomal protein L10, mitochondrial [Spodoptera litura])

HSP 1 Score: 104.76 bits (260), Expect = 3.821e-23
Identity = 66/232 (28.45%), Postives = 114/232 (49.14%), Query Frame = 0 
Query:   28 AGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPH---PTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256
            A R   + +IQ P  P F+R  L+ +++P++  P    P T      C R  +  A    E  NP+E+I A E       S MV   H N ++       +    +  + L++Y  +I      GT++E + + +    S Q + FGQ  NV +M +  KKAP L I+  ++ DR++ + E++E + + N+D  R QLC++L          + +  QAL  +LE++++ QS
Sbjct:   18 AKRFRGKINIQRPKKPHFERQLLIDLAKPKYGTPKYLLPDTVL----CDRGEKRYAR---EIDNPFERILANECLNWFNTSKMVIFLHVNAISMEDKMPVFAALNKNNMHLRTYGKKIVSMATTGTRYEAVNHLF---TSHQNIIFGQPENVAKMFKIMKKAPQLVIMAGIIQDRLMSKNELLEYSQMQNIDVARSQLCAVLDSAGSCLVRQLTQGQQALVGHLEKHVELQS 239
[Close]
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|907686510|ref|XP_013107263.1| (PREDICTED: 39S ribosomal protein L10, mitochondrial [Stomoxys calcitrans])

HSP 1 Score: 104.375 bits (259), Expect = 4.437e-23
Identity = 68/237 (28.69%), Postives = 113/237 (47.68%), Query Frame = 0 
Query:   30 RASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLT---YYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTVSK 263
            R   + +IQ P  P ++R K+L V+ PR+  P P T T +    R+ +          NPY  I ARE+   L  S MV ++H N++    ++ AR       +  ++LK Y  +I +  + GT++E +L  +E   S   + F  E  V Q+L+  +K P + ++  ++DD ++ R E ME A L  L   + +L   L M A      +  H +     L+ Y K +S  +  SK
Sbjct:   24 RYRGKINIQRPRQPHYERAKMLAVTAPRYPEP-PKTTTCFEKRTRQIQ---------ENPYNDIIAREVHNWLLNSKMVAIFHLNSIKSDDFFEARVMLH---KQNMQLKMYGQKIVKKAVEGTRFEAILPLFE---SQPCIVFSPEAKVSQLLKITRKIPQMILMAGIVDDTLLSRSEFMEYAQLPGLQSAQAELVHTLNMAASTLVQNLEAHQKNFVNVLDVYAKGESEGSPESK 244
[Close]
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|498988355|ref|XP_004531332.1| (39S ribosomal protein L10, mitochondrial [Ceratitis capitata])

HSP 1 Score: 104.375 bits (259), Expect = 4.817e-23
Identity = 68/245 (27.76%), Postives = 118/245 (48.16%), Query Frame = 0 
Query:   26 TSAGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTE-----TLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLT---YYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTVS 262
            T + R   + +IQ P  P ++R K+L V++   S+P    E     T ++   RET +         NPY  I ARE+R  L  S M+G YH N++     +P R       +  + LKSY  ++ +  + GT++E +L  +E   S+  + F  E  V Q+L+  ++ P + ++  ++D+R++ R E M  A L  L   +G+L   L M A      +  H +     L+ + K ++ D T +
Sbjct:   18 TQSQRFRGKINIQRPRAPHYERAKVLAVAQ---SIPAVVEEPKKKTTCFQSRRRETNME--------NPYLTIIAREVRNWLLHSRMIGFYHMNSIKQDDLFPVRVQLH---KQNMHLKSYGKEVVKKAVEGTQFEAILPLFE---SNNCIVFSTEQRVSQLLRITRRVPQMILMAGIVDERLLSRNEFMAYAQLPGLQAAQGELVQTLNMAASNLVQQLETHQKNFVNVLDVHAKGETNDGTTA 245
[Close]
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1048054070|ref|XP_017481104.1| (PREDICTED: 39S ribosomal protein L10, mitochondrial isoform X1 [Rhagoletis zephyria])

HSP 1 Score: 102.834 bits (255), Expect = 1.521e-22
Identity = 68/248 (27.42%), Postives = 115/248 (46.37%), Query Frame = 0 
Query:   16 VAWGSSAGLSTSAGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTVSK 263
            VA  S     T + R   + +IQ P  P ++R K+L V++   ++  P  +     C +  +  A+ E    NPY  + ARE+R  LE S ++G YH N++             +  + LKSY  QI    + GT++E +L  +E   S   + F  E  V Q+L+  ++ P + ++  ++D+R++ R E M  A L  L   +G+L   L M A      +  H +     L+ Y K +   T  +K
Sbjct:    8 VALLSCRTPITQSQRFRGKINIQRPRAPHYERAKVLAVAQTLPALEEPEKQI---TCFQRRQREADVE----NPYVAVIAREVRNWLEHSRLIGFYHLNSIKQDDLFEVRVKLHKQNMHLKSYGKQIVHKAVEGTRFEAILPLFE---SKNCIVFSTEQRVGQLLRITRRVPQMILLAGIVDERLLSRNEFMAYAQLPGLQAAQGELVQTLNMAASNVVQQLETHQKNFVNVLDVYAKGEPETTGPAK 245
[Close]
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1048054072|ref|XP_017481105.1| (PREDICTED: 39S ribosomal protein L10, mitochondrial isoform X2 [Rhagoletis zephyria])

HSP 1 Score: 102.449 bits (254), Expect = 1.798e-22
Identity = 65/238 (27.31%), Postives = 112/238 (47.06%), Query Frame = 0 
Query:   26 TSAGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTVSK 263
            T + R   + +IQ P  P ++R K+L V++   ++  P  +     C +  +  A+ E    NPY  + ARE+R  LE S ++G YH N++             +  + LKSY  QI    + GT++E +L  +E   S   + F  E  V Q+L+  ++ P + ++  ++D+R++ R E M  A L  L   +G+L   L M A      +  H +     L+ Y K +   T  +K
Sbjct:   17 TQSQRFRGKINIQRPRAPHYERAKVLAVAQTLPALEEPEKQI---TCFQRRQREADVE----NPYVAVIAREVRNWLEHSRLIGFYHLNSIKQDDLFEVRVKLHKQNMHLKSYGKQIVHKAVEGTRFEAILPLFE---SKNCIVFSTEQRVGQLLRITRRVPQMILLAGIVDERLLSRNEFMAYAQLPGLQAAQGELVQTLNMAASNVVQQLETHQKNFVNVLDVYAKGEPETTGPAK 244
[Close]
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|910330285|ref|XP_013168434.1| (PREDICTED: 50S ribosomal protein L10 [Papilio xuthus])

HSP 1 Score: 101.679 bits (252), Expect = 3.190e-22
Identity = 61/232 (26.29%), Postives = 117/232 (50.43%), Query Frame = 0 
Query:   28 AGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDT 259
            A R   + +IQ P  P F+R  L+ +++P +  P  T   +      +TE     + E  NP+E+I A+E  +    S MV   H N+++       +   ++  + L+ Y  +I +    GT++E +   +    S Q + FG   +  +M +  KKAP L ++  +++DR++ + E++E + L NLD  R QLC +LQ  A      + +  Q L  +LE++++ ++ ++
Sbjct:   18 ARRFRGKINIQKPRKPHFERQLLIDLTKPYYGPPKYTLPDIVLCDKAKTE----QKKEIDNPFERILAKECLDWFNTSKMVVFLHLNSISMEDKTPIFAALKKNNMHLRVYGKKIVKMATTGTRYEVVNCLFN---SHQNIIFGHPESADKMFKILKKAPQLVVLAGIIEDRLMSKNELVEFSKLPNLDMARSQLCGVLQSAASCLVGQLNQSQQTLVSHLEKHVEIKNSES 242
[Close]
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1247029422|gb|PCG66889.1| (hypothetical protein B5V51_7115 [Heliothis virescens])

HSP 1 Score: 101.679 bits (252), Expect = 4.879e-22
Identity = 63/237 (26.58%), Postives = 115/237 (48.52%), Query Frame = 0 
Query:   28 AGRASSRPSIQHPHHPSFDRLKLLTVSEP-----RHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDT 259
            + R   + +IQ P  P F+R  L+ +S+P     +H++P  T       C R  +       E  NP+E+I A E       S MV   H N+++       +    +  + L++Y  +I      GT++E + + +    S Q + FGQ  NV +M +  KKAP L I+  ++ DR++ + E++E + + N+D  R QLC++L          + +  Q L  +L+++++ Q+  T
Sbjct:   18 SKRFRGKINIQKPRKPHFERQLLIDISKPVYGPPKHTLPDITL------CDRGEKRFVK---EIDNPFERILANECLNWFNTSKMVIFLHVNSISMEDKTPVFAALAKNNMHLRTYGKKIVSMATTGTRYEAVNHLF---TSHQNIIFGQPENVAKMFKIMKKAPQLVIMAGIIQDRLMSKNELVEYSQMQNIDTARSQLCAVLDSAGSNLVRQLQQGQQTLVAHLDRHVELQNTPT 242
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BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1321316774|ref|XP_023300672.1| (39S ribosomal protein L10, mitochondrial [Lucilia cuprina] >gi|906460316|gb|KNC23107.1| hypothetical protein FF38_07183 [Lucilia cuprina])

HSP 1 Score: 100.908 bits (250), Expect = 6.746e-22
Identity = 65/237 (27.43%), Postives = 114/237 (48.10%), Query Frame = 0 
Query:   30 RASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLT---YYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTVSK 263
            R   + +IQ P  P ++R +++ V+ PR+  P P T T +    R  E          NPY  I +RE+R  L+ S MV ++H N++    ++  R       +  ++LK Y  +I    + G+++E +L  +E   S Q + F  E  V Q+L+  +K P + ++  ++D+ ++ R E M  A L +L   + +L   L   A      +  H       L+ Y K  SG+++VSK
Sbjct:   23 RYRGKINIQRPKQPHYERARVVAVTTPRYPEP-PKTSTCFEKRTRTVE---------ENPYNDIISREVRNWLDHSKMVAIFHLNSINSDDFFDVRVQLH---KQNMQLKMYGPKIVRKAVEGSRYEAILPLFE---SQQCIVFSPEQKVSQLLKITRKVPQMLLLAGIVDNTLLSRNEFMNYAQLPSLQSAQAELVHTLNTAASTLVQNLEAHQNNFVNVLDVYAK--SGESSVSK 241
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BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|914577709|gb|KOB79349.1| (putative mitochondrial ribosomal protein, L10, partial [Operophtera brumata])

HSP 1 Score: 100.138 bits (248), Expect = 1.049e-21
Identity = 62/240 (25.83%), Postives = 118/240 (49.17%), Query Frame = 0 
Query:   26 TSAGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQY--MKDQSGDTTVSK 263
            T A R   + +IQ P  P F+R  L+ +++P +  P  +   +   C +E     + + E  NP+E+I ARE       S MV   H N+++       +    + ++ L+ Y  +I      GT++E + + +    S Q + FGQ  N  ++ +  KK P L ++  ++ DR++ + E++E + L +LD  R QLC++L        + + +  Q L  +L+++  +K+Q    T +K
Sbjct:    9 TIAKRFRGKINIQRPRAPHFERQLLIDLAKPVYGPPKWSVPQIVV-CEKEN---TSVKKEIDNPFERILARECLNWFNTSKMVVFLHLNSISMEEKTPIFAALTKNKMHLRCYGKKIVSMATTGTRYEAVNHLF---TSHQNIIFGQPENAAKLFKILKKTPQLVVMAGIIQDRLMSKNELVEFSQLPSLDAARSQLCAVLDSAGSCIVNQLNQSQQTLVSHLDKHVELKNQPAAVTENK 241
The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000056147.064e-3244.80supercontig:LSalAtl2s:LSalAtl2s3012:1:1104:1 gene:... [more]
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BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
gi|121995499|sp|Q29NV5.1|RM10_DROPS3.397e-1925.11RecName: Full=39S ribosomal protein L10, mitochond... [more]
gi|74870265|sp|Q9VPL3.1|RM10_DROME4.197e-1522.65RecName: Full=39S ribosomal protein L10, mitochond... [more]
gi|82178554|sp|Q5BJB7.1|RM10_DANRE1.989e-1424.81RecName: Full=39S ribosomal protein L10, mitochond... [more]
gi|124053348|sp|Q3TBW2.2|RM10_MOUSE1.923e-1231.85RecName: Full=39S ribosomal protein L10, mitochond... [more]
gi|124053346|sp|Q3MHY7.2|RM10_BOVIN2.362e-1225.00RecName: Full=39S ribosomal protein L10, mitochond... [more]
gi|124053349|sp|P0C2C4.1|RM10_RAT5.269e-1224.79RecName: Full=39S ribosomal protein L10, mitochond... [more]
gi|215274216|sp|Q7Z7H8.3|RM10_HUMAN7.703e-1023.53RecName: Full=39S ribosomal protein L10, mitochond... [more]
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BLAST of 39s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1209689703|gb|OWR44560.1|3.078e-2324.89putative mitochondrial ribosomal protein L10 [Dana... [more]
gi|1274098225|ref|XP_022834372.1|3.821e-2328.4539S ribosomal protein L10, mitochondrial [Spodopte... [more]
gi|907686510|ref|XP_013107263.1|4.437e-2328.69PREDICTED: 39S ribosomal protein L10, mitochondria... [more]
gi|498988355|ref|XP_004531332.1|4.817e-2327.7639S ribosomal protein L10, mitochondrial [Ceratiti... [more]
gi|1048054070|ref|XP_017481104.1|1.521e-2227.42PREDICTED: 39S ribosomal protein L10, mitochondria... [more]
gi|1048054072|ref|XP_017481105.1|1.798e-2227.31PREDICTED: 39S ribosomal protein L10, mitochondria... [more]
gi|910330285|ref|XP_013168434.1|3.190e-2226.29PREDICTED: 50S ribosomal protein L10 [Papilio xuth... [more]
gi|1247029422|gb|PCG66889.1|4.879e-2226.58hypothetical protein B5V51_7115 [Heliothis viresce... [more]
gi|1321316774|ref|XP_023300672.1|6.746e-2227.4339S ribosomal protein L10, mitochondrial [Lucilia ... [more]
gi|914577709|gb|KOB79349.1|1.049e-2125.83putative mitochondrial ribosomal protein, L10, par... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold170_size291898supercontigscaffold170_size291898:152598..154620 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteC:ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold170_size291898-snap-gene-1.44-mRNA-1maker-scaffold170_size291898-snap-gene-1.44-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold170_size291898:152598..154620+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold170_size291898-snap-gene-1.44 ID=maker-scaffold170_size291898-snap-gene-1.44|Name=39s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=2023bp|location=Sequence derived from alignment at scaffold170_size291898:152598..154620+ (Tigriopus kingsejongensis)
TCTCATGCCCTCGATTGTCCCAAGTCGGAGGTAACCCGTCAAGATGGCTT
CACGTGAGTGTCCCACCCGTTTGGGTGACGAGTGGATCCGCTCTCAGTCT
GGTCCATTTCAGTTTCCGCCGCCCTCATTCTGCGGGCTCGGCCGGGCGTG
GCGTGGGGTTCGAGTGCCGGTCTCAGCACGAGTGCGGGTCGAGCCTCGTC
CCGTCCGTCTATCCAGCATCCTCATCACCCCTCTTTCGATCGCCTCAAGC
TGCTGACTGTGAGTGAGCCCCGTCATTCGGTCCCTCATCCCACCACGGAG
ACGCTCTACCGCGACTGTCCTCGTGAAACCGAACTAGCGGCCAATGCGGA
ATTGGAGTCAGCCAATCCTTATGAAAAGATTTTCGCCCGCGAATTGCGGG
AGCTCCTCGAGCAGAGTCCCATGGTGGGCCTGTACCACGCCAACAACCTC
ACTTACTACCCTGCTCGAACCGTGAGTTGACCCCAGCCAATGACTGGACC
ATGGGCCGTCCGCAAGGGCCGCTGGGGACTCGGGCTAAATGGGAACAGTG
GTCCCATCTGGCCTATACGTATACTGATCGACACAGATTATTCGGGAAAA
GTTTCAGGCACACTCGCCACCTTTCCAGCCTTTGAGGTCGCGAGGATGTC
AACCATCCGGGTCTATGTACTGTTATGGAGTGGCCTTTCAGGGGGTGGCC
AGCGATCCCTGATCAGGCCATTGGGCCCGGAAATGAGCTCATCGAGCACC
TATCCTGGCTGGCTTAGCGTTGGCTGAGAACCCAACCTGTGAAAGATGCA
CCTTTATCCAATTGGCAGGCTGTACTTATCAGTCCATAGCATATGGACTG
AAAAGACAGCCCTCCGGAATCGAAAGCGGGCAATTTGGAGATATGCCTGC
CTGCTATGACACTGAGTTGGTCTCAAAAACTGTCCAATCAGGGGCAATCC
AACGCTAATGGGTGACAGATTGACACTCACGACCCTGGTTAAGTAAGTTA
GCTACATAGCAGTACATAACTCAGTCTCGTTGGCATCCCGGCGATCGTGG
TCCAGTGCGACCATGGTTGTTCTTTAGGGGGTAGGAATTTGCCCGATTAG
TATACGTATAGGCATAACTGTATCACCCGGGAGTCTGGAACCAACTAAGT
TATGAGACAATGAGTCCTTTCACCGGACCATTACTCATTGTAACTAGGGG
TCGGAAAGCATTTTGAAACACTTATTGCAAGTCCAGTTTTGAATTCAGTC
GCACTTTGGCAAACTTGAGCCAACTTGAATGCCATTTCTTACCAATTTTC
CTTTGCGGCTGGACTCCTGCCTCCGTTTGGTCCAGCTTGTTTTACTCATC
ACAACTCGTGCTCCATTCTTGTCCTTTGGTTTTTTTGCATCTAGTCGGCT
GATGAAAATATGCCGAATTGCCAGGCATTTAATTTTTTTGAATATCTCGC
GGAATAAAACCTACTGCTTTTTCATTTATAAAAGGGAAGCCCAGTTTGAA
TTCTGGGTTGTCTCTTCCTAGGCTTATCAAAATGCCCGGCGTTGTCAACT
GGAACTCAAATCGTACAATTATCAGATTGGCGAAGCGGTTTTGCGGGGGA
CCAAATGGGAGAATCTGCTGTACTTTTGGGAGACGGGTGTCTCGGACCAA
TACTTGACCTTTGGCCAGGAGATCAATGTCAAGCAAATGCTTCAATTCGA
AAAGAAAGCTCCCGCGCTCTTCATCATCGGTAATTAATACCCCTTCCAAC
CTCACCGTGAAGGCAAATTCAGCCGCTACGCTATTTTGCAGGTGCCCTAC
TGGACGATCGGATAGTGGACCGTGGTGAAATCATGGAATTGGCCGCACTG
TCCAACCTGGACGACCTTCGAGGTCAATTGTGCTCGATCTTGCAGATGCC
GGCCAGGAAAACGTCTTCCCTCATCGGTCGCCATCCGCAAGCTCTATCTC
AGAATCTGGAGCAATATATGAAAGATCAATCGGGGGACACCACTGTCTCG
AAATAAACCCGCACTCCCGGCTG
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Synonyms
The feature '39s ribosomal protein mitochondrial' has the following synonyms
Synonym
Tk03011
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