39s ribosomal protein mitochondrial, maker-scaffold170_size291898-snap-gene-1.44 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Match: EMLSAG00000005614 (supercontig:LSalAtl2s:LSalAtl2s3012:1:1104:1 gene:EMLSAG00000005614 transcript:EMLSAT00000005614 description:"maker-LSalAtl2s3012-augustus-gene-0.6") HSP 1 Score: 113.235 bits (282), Expect = 7.064e-32 Identity = 56/125 (44.80%), Postives = 86/125 (68.80%), Query Frame = 0 Query: 133 LELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256 +ELK YN + +AVL GTKWE L+F E+ ++QY+TFG +I + +++FEKK P L +IGA+ D+I+ R +++++++L ++ L QL SIL P R+T S +G LSQNL Q++KDQS Sbjct: 1 MELKDYNRRSCKAVLPGTKWEKCLHFVESCRTNQYMTFGSDIETLPNLIKFEKKTPELILIGAVAYDKILRRQDVLQISSLPDIQVLYSQLASILTSPQRQTLSYLGSGASGLSQNLSQFLKDQS 125
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|121995499|sp|Q29NV5.1|RM10_DROPS (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor) HSP 1 Score: 87.0409 bits (214), Expect = 3.397e-19 Identity = 59/235 (25.11%), Postives = 114/235 (48.51%), Query Frame = 0 Query: 30 RASSRPSIQHPHHPSFDRLKLLTVSEPRH-SVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFG-QEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTVS 262 R + +IQ P P ++R +++ V++P++ +P R C + +LE NPY +I ARE+R L S +V ++H N++T + L LKSY +I + + GT +E ++ + S+ + F + + +L+ ++ P + ++G +++ ++ R E+M A + NL + QL L + A + + H L Q L+ + K +GDT + Sbjct: 23 RFRGKINIQRPKEPHYERARVVAVTQPKYPELPKA------RSCFQTRAERTKEQLE--NPYNEIIAREVRNWLNHSQLVAIFHLNSITADEIFRVRVQLHKQNLHLKSYGRKIIDQAVTGTPYEAIMPLFH---SNHCIVFSPNQQQIGALLKITRRVPQMVLLGGIVEKTLLSRNELMAYAQMPNLQGAQAQLVQTLNLAAGQLVQHLQTHQANLVQVLDVHAKG-NGDTNTN 245
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|74870265|sp|Q9VPL3.1|RM10_DROME (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor) HSP 1 Score: 75.8702 bits (185), Expect = 4.197e-15 Identity = 53/234 (22.65%), Postives = 114/234 (48.72%), Query Frame = 0 Query: 30 RASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPH-PTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEI-NVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSIL-QMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTT 260 R + +IQ P P ++R +++ V++P++ P P ++ ++ A + + NPY +I ARE+R L+ S +V +H +++T + L LKSY +I E ++ T++E ++ + S+ + F + +L+ ++ P + ++G ++++ ++ R +++ A + L ++ QL L Q P L H + Q L+ + K+Q + T Sbjct: 23 RFRGKINIQRPKAPHYERARVVAVTQPKY--PELPKAKSCFKT------RAERTQQQQENPYNEIIAREVRNWLDHSRLVAFFHLSSITADDIFRVRVQLHKQNLHLKSYGSKIIEQAVKNTRYEAIVPLFH---SNHCIVFSPDPEKTAALLRIVRRVPQMVLLGGIVEETMLSRNQLVAYAQMPGLHAVQAQLVQTLSQAPGHLIQQLQA-HQNSFVQVLDVHAKNQMNEET 244
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|82178554|sp|Q5BJB7.1|RM10_DANRE (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor) HSP 1 Score: 73.9442 bits (180), Expect = 1.989e-14 Identity = 65/262 (24.81%), Postives = 113/262 (43.13%), Query Frame = 0 Query: 4 LSAALILRARPGVAWGSSAGLSTSAGRASSRPSIQHPHHPSFDRLKLLTVSE---PRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENL--LYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTT 260 ++A L R P W T + R S+ +H F + KLL V+E P S P + E+ LA + ++L L ++ M+ + N ++ ++ + +K + Q+ + L + + N+ L F ET L +E VK+MLQ + P + ++GA +++ + I+ + L ++ +RG+L S L M KT S++ HP LS L+QY+K QS T Sbjct: 1 MAATLCCRLLPKAGWVPL----TQSVRHGSKAVTRHKKPVHFQKQKLLAVTEYIPPTLSAPPAALAPRVKKTGEESSLAV------------MLRKDLENLFQEYKMIAVAQNNAISAEDMIHLKHRLKKHAINVKFFPNQVTRSFLNSSIYGNMSPLIFGET-----VLLASKEPKVKEMLQALRHNPQIVLLGACIENTLFSYQGILSYSKLPSIAIIRGELVSGLTMMTSKTVSMLHHHPAHLSALLQQYVKQQSSADT 241
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|124053348|sp|Q3TBW2.2|RM10_MOUSE (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor) HSP 1 Score: 68.5514 bits (166), Expect = 1.923e-12 Identity = 43/135 (31.85%), Postives = 73/135 (54.07%), Query Frame = 0 Query: 129 RRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS-GDTTVS 262 R+ ++ +K + Q+ + L +K+ NLL + V L +E VK+M++ K P L ++G +DD I+ R +++ A L +LD L+GQL L +T L+ P L+ L+QY+K+Q+ GD S Sbjct: 117 RKHKIFIKVFPSQVLKPFLENSKYRNLLPLF---VGHNLLLVSEEPKVKEMVRVLKSVPFLPLLGGCVDDTILSRQGLVDYAKLPSLDQLQGQLVGGLTHLMAQTRYLLQHQPVQLTSLLDQYVKEQNEGDCATS 248
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|124053346|sp|Q3MHY7.2|RM10_BOVIN (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; Flags: Precursor) HSP 1 Score: 68.1662 bits (165), Expect = 2.362e-12 Identity = 64/256 (25.00%), Postives = 109/256 (42.58%), Query Frame = 0 Query: 15 GVAWGSSAGLSTSAGRA--------SSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQ-SGDTTV 261 VA GL AGR S+ +H F+R KL+ V+E + P P PR + E ++ RE+ + + M+ + ++ R+ ++ +K + QI + L +K++NLL + V L +E VK+M++ K P L ++G +DD I+ R + + L +L +G+L L + +T SL+ HP L+ L+QY + Q GD V Sbjct: 4 AVAGMLRGGLLPQAGRLPTHQFIRYGSKAVTRHRRVMHFERQKLMAVTE--YIAPKPVVN------PRCLPPPPSPPQEETG-LIRLLRREIAAVFRDNRMIAVCQNVAMSAEDKLLMRHQLRKHKILMKVFPNQILKPFLEDSKYQNLLPLF---VGHNLLLVSEEPKVKEMVRILKSVPFLPLLGGCIDDTILSRQGFINYSKLPSLALAQGELVGGLTLLTARTHSLLQHHPLQLTALLDQYARQQHEGDPVV 247
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|124053349|sp|P0C2C4.1|RM10_RAT (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; AltName: Full=MRP-L8; Flags: Precursor) HSP 1 Score: 67.3958 bits (163), Expect = 5.269e-12 Identity = 58/234 (24.79%), Postives = 103/234 (44.02%), Query Frame = 0 Query: 30 RASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQ-SGDTTVS 262 R S+ +H F R KL+ ++E + P P PR E + ++ R++ + + M+ + L+ R+ ++ +K + Q+ + L +K++NLL + V L +E VK+M++ K P L ++G +DD I+ R +E A L +LD L+G+L L +T L+ P L+ L+QY++ Q GD S Sbjct: 28 RHGSKAVTRHRRVMHFQRQKLMAITE--YIPPRPAVS------PRCLPPPPKPPKEESG-LIRLLRRDIAAVFRDNRMIAVCQNVALSAEDKLLLRHQLRKHKIFIKVFPSQVLKPFLEDSKYQNLLPLF---VGHNLLLVSEEPKVKEMVRILKSVPFLPLLGGCIDDTILSRQGFVEYAKLPSLDRLQGELVGGLTHLTAQTRYLLQHQPVQLTSLLDQYVRQQHEGDCATS 249
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|215274216|sp|Q7Z7H8.3|RM10_HUMAN (RecName: Full=39S ribosomal protein L10, mitochondrial; Short=L10mt; Short=MRP-L10; AltName: Full=39S ribosomal protein L8, mitochondrial; Short=L8mt; Short=MRP-L8; AltName: Full=Mitochondrial large ribosomal subunit protein uL10m; Flags: Precursor) HSP 1 Score: 61.2326 bits (147), Expect = 7.703e-10 Identity = 40/170 (23.53%), Postives = 83/170 (48.82%), Query Frame = 0 Query: 92 KIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTV 261 ++ RE+ + + + M+ + L+ R+ ++ +K + Q+ + L +K++NLL + V L +E VK+M++ + P L ++G +DD I+ R + + L +L ++G+L L +T SL+ P L+ L+QY+++Q +V Sbjct: 80 RLLRREIAAVFQDNRMIAVCQNVALSAEDKLLMRHQLRKHKILMKVFPNQVLKPFLEDSKYQNLLPLF---VGHNMLLVSEEPKVKEMVRILRTVPFLPLLGGCIDDTILSRQGFINYSKLPSLPLVQGELVGGLTCLTAQTHSLLQHQPLQLTTLLDQYIREQREKDSV 246
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1199392521|ref|XP_021191296.1| (39S ribosomal protein L10, mitochondrial [Helicoverpa armigera]) HSP 1 Score: 99.7525 bits (247), Expect = 1.946e-21 Identity = 62/234 (26.50%), Postives = 114/234 (48.72%), Query Frame = 0 Query: 28 AGRASSRPSIQHPHHPSFDRLKLLTVSEP-----RHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256 + R + +IQ P P F+R L+ +S+P +H++P T C R + A E NP+E+I A E S MV H N+++ + + + L+ Y +I GT++E + + + S Q + FGQ N+ +M + KKAP L I+ ++ DR++ + E++E + + N+D R QLC++L + + Q L +L+++++ Q+ Sbjct: 18 SKRFRGKINIQKPRKPHFERQLLIDLSKPFYGPPKHTIPDITL------CDRGEKRFAK---EIDNPFERILANECLNWFNTSKMVIFLHVNSISMEDKFPVFAALTKNNMHLRCYGKKIVSMATTGTRYEAVNHLF---TSHQNILFGQPENIAKMFKIMKKAPQLVIMAGIIQDRLMSKNELVEYSQMQNIDTARSQLCAVLDSAGSHLVRQLQQGQQTLVAHLDKHVELQN 239
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|751467350|ref|XP_011188754.1| (PREDICTED: 39S ribosomal protein L10, mitochondrial [Zeugodacus cucurbitae]) HSP 1 Score: 98.5969 bits (244), Expect = 4.869e-21 Identity = 64/235 (27.23%), Postives = 114/235 (48.51%), Query Frame = 0 Query: 30 RASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRD-CPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTVSK 263 R + +IQ P P ++R K+L ++ +P E + C + + A+ E NPY + ARE+ LE S MVG YH N++ + + + LKSY +I + + GT++E +L +E S+ + F + V Q+L+ ++ P + ++ ++D+R++ R E ME A L L +GQL L M A + H + L+ Y K ++ ++ +K Sbjct: 22 RFRGKINIQRPRAPHYERAKVLAAAQ---YLPAEVEEPKKKSACFQRRQRDADIE----NPYIAVIAREVSNWLEHSHMVGFYHLNSIKDDELFSVRVQLHKQNMHLKSYGKKIVQKAVEGTRFEAILPLFE---SNNCVVFSTQQQVPQLLRITRRVPQMLLLAGIVDERLLSRNEFMEYAKLPGLQAAQGQLVQTLNMAAGNVVQQLETHQKNFVNVLDVYAKGETNESVPAK 246
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|929351128|ref|XP_014103203.1| (PREDICTED: 39S ribosomal protein L10, mitochondrial [Bactrocera oleae]) HSP 1 Score: 97.8265 bits (242), Expect = 1.214e-20 Identity = 60/240 (25.00%), Postives = 112/240 (46.67%), Query Frame = 0 Query: 26 TSAGRASSRPSIQHPHHPSFDRLKLLTVSE--PRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQSGDTTVSK 263 T + R + +IQ P P ++R K+L ++ P T ++ R+ ++ NPY + ARE+R E SPM+G YH N++ T + + LK+Y +I + + T++E +L +E S+ + F + V Q+L+ ++ P + ++ ++D+R++ R E A L L +G+L L M A + H + L+ Y K ++ + T +K Sbjct: 18 TQSQRFRGKINIQRPRAPHYERAKVLAAAQYSPAKVEDSKKNTTCFQRRQRDADIE--------NPYIAVIAREVRNWFEHSPMIGFYHLNSINADELFTIRVQLHKQNMHLKAYGKKIVQKAVEDTRFEAILPLFE---SNNCVVFSTQQQVSQLLRITRRVPQMLLMAGIVDERLLSRNEFTAYAQLPGLQAAQGELAQTLNMAAGNVVQQLETHQKNFVNVLDVYAKGEANENTPAK 246
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1005967645|ref|XP_015791676.1| (PREDICTED: 39S ribosomal protein L10, mitochondrial-like [Tetranychus urticae]) HSP 1 Score: 97.0561 bits (240), Expect = 1.584e-20 Identity = 64/222 (28.83%), Postives = 106/222 (47.75%), Query Frame = 0 Query: 30 RASSRPSIQHPHHPSFDRLKLLTVSEP--RHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHAN---NLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQ 246 R + +++ P P +++ LL EP R + PT+ C T+L E E +PY + A EL++ + +S +G YH N +L Y AR N+ ++ Y I + L+ TK++ LL F+ + FG +NVK +L+ EK AP L ++ + DR++ + E++E++ L NL L QL L +S + H LS Sbjct: 30 RTKKKLTLRSPQFPVYEKKLLLAACEPIMRRASEIPTS----MQCTNVTKL----EDEEPHPYIAVLADELKDFMNKSSFIGFYHLNSCADLDYRAARNTIINS---GFAVRLYQNNIADLALKSTKYDPLLKFFSRSCK-TVMVFGDNLNVKPLLKIEKTAPFLILMFGVYQDRVLRKDELIEISNLPNLSTLHAQLYHTLNTFGTSLTSTLDYHGNTLSN 239
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|913304800|ref|XP_013182847.1| (PREDICTED: 50S ribosomal protein L10 [Amyelois transitella]) HSP 1 Score: 96.2857 bits (238), Expect = 3.376e-20 Identity = 57/229 (24.89%), Postives = 112/229 (48.91%), Query Frame = 0 Query: 28 AGRASSRPSIQHPHHPSFDRLKLLTVSEPRHSVPHPTTETLYRDCPRETELAANAELESANPYEKIFARELRELLEQSPMVGLYHANNLTYYPARTAYQNARRCQLELKSYNYQIGEAVLRGTKWENLLYFWETGVSDQYLTFGQEINVKQMLQFEKKAPALFIIGALLDDRIVDRGEIMELAALSNLDDLRGQLCSILQMPARKTSSLIGRHPQALSQNLEQYMKDQS 256 R + +IQ P P F+R L+ +S+P + P + Y C + + ++ E NP+E+I ARE + S MV H N+++ + ++ + L++Y +I +GT++E + + S Q + FGQ +M + KKAP L ++ ++ D+ + + E++E + + ++D R QLC++L + + Q L LE++++ Q+ Sbjct: 18 VKRFRGKINIQRPRKPHFERQLLIDLSKPYYG-PRKNSLPDYALCDKSKQ---SSRTEIDNPFERILARECLDWFNTSKMVVFLHLNSISMEDKTPIFATLKKNDMHLRTYGKKIVSMATKGTRYEAVNQLF---TSHQNIIFGQPDKADKMFKILKKAPQLVVMAGIIQDKFMSKNELLEFSKMPSIDMARSQLCAVLDSAGCSLVRQLNQSQQMLVSYLEKHVELQN 239 The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 7
BLAST of 39s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold170_size291898:152598..154620+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold170_size291898-snap-gene-1.44 ID=maker-scaffold170_size291898-snap-gene-1.44|Name=39s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=2023bp|location=Sequence derived from alignment at scaffold170_size291898:152598..154620+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '39s ribosomal protein mitochondrial' has the following synonyms
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