39s ribosomal protein mitochondrial, maker-scaffold180_size281610-snap-gene-0.40 (gene) Tigriopus kingsejongensis

Overview
Name39s ribosomal protein mitochondrial
Unique Namemaker-scaffold180_size281610-snap-gene-0.40
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Match: EMLSAG00000004153 (supercontig:LSalAtl2s:LSalAtl2s219:347626:350474:1 gene:EMLSAG00000004153 transcript:EMLSAT00000004153 description:"maker-LSalAtl2s219-augustus-gene-3.25")

HSP 1 Score: 288.115 bits (736), Expect = 3.060e-93
Identity = 171/455 (37.58%), Postives = 248/455 (54.51%), Query Frame = 0
Query:    1 MRLTWVAWGRK---GINHWELLCHKHWNNRWQLGRHQRIKNRDFARRIAERGIPVLTPEDVMHYPTLPPMPTYEGVEWATEPS--REPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTFEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPR-HEFFTKCEYDQGLPTLEAYNPKTFTTLLGLYLQ 449
            MRLT V + RK     NH       ++NN WQ GR   + + D  + +   GIPV++P+DV+    + P   YE  E+    S  RE     + HPL++D PVHT    + F    +LD AK+LTK+VE+  GLP  ++ +I +  L       ++  I+ET MFDA+Q  LP    VP IGW PV D+M    PYP    SWQ K AR++GIP  R + NLTRGL R  D    +  ++L R   E   L Q+F+RL       + +P  +  P  + P+ D+   +++  L +PD+ P+     +WP +VYR+ N  P++D      +  +    +P  +   NE  +AA SL  SF  ALGQA + +GS+ + VLPEP++V FI T+G +   +AFQLNTL+L+ + GVKN+FWHE      +  CEY QG P  E+ N   F  LL +Y +
Sbjct:    1 MRLTRVLFRRKLPVRRNH-----PINFNNAWQEGRTLPLTDTDDQKVLTSMGIPVVSPQDVIQSSYVMP---YEVPEYDPPKSIIRENLPKDESHPLWKDRPVHTFGDRTYFPVNHQLDLAKNLTKTVELDVGLPSRLIQSIEKTSLSEEALSSVEDMIKETQMFDAIQKKLPFNYKVPFIGWHPVNDRMSSKTPYPV-TMSWQYKEARKYGIPLPRSTLNLTRGLFRLLDQFCPEAKDILHRVNHEKQILRQYFNRLGSYTRVSVHLPFSVWSPHLIKPYADTNTTKSSISLKLPDIHPMEPQVGLWPINVYREENNLPIMDGSLLRAHTLVNNYTNPVPDLA-NEDQFAANSLMLSFASALGQAXLLYGSEFSDVLPEPITVHFINTDGKKFHISAFQLNTLELSTNDGVKNIFWHEKEMSSLYDVCEYVQGRPMFESLNSSLFKKLLAMYAE 445          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|288559136|sp|A4FUC0.1|RM37_BOVIN (RecName: Full=39S ribosomal protein L37, mitochondrial; Short=L37mt; Short=MRP-L37; Flags: Precursor)

HSP 1 Score: 95.1301 bits (235), Expect = 5.247e-20
Identity = 92/378 (24.34%), Postives = 155/378 (41.01%), Query Frame = 0
Query:   88 KDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLA-AIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTF--EYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLE-----------AYNPKTFTTLLGLYLQGV 451
            ++HPLY+DE  +  H   + ++G  + QA  LTK+  ++ GLP+ VL+ A         QDER+   I    ++ + +  +P+R       + PV+                                      L++ C +  + +P L  R   + N L+  + R    +    S    +    PL P     EVEAT+   +    P++   S+   H+Y D N       G+  P  H  +  +      + F      A+ +  +F  AL QAR+ +G+D   VL +PV V+ + T+G    F   QLNT DL  + G+KN+ W +     +   ++   LP ++            + P+TF   L LYL G 
Sbjct:   94 QEHPLYKDEVCYIFHQRCRLLEG--VKQALWLTKTKLIE-GLPEKVLSLADNPRNHIENQDERVLNVISHARLWHSTE-DIPKRET-----YCPVI-----------------------------------VDSLIQLCKSQILKHPSLARRICAQKNMLSTTWKRESTLIQVHGSSGAQLNAKDPLPPIASREEVEATKNHVLETFSPISPTISLQECHIY-DVNDDTGFREGYPYPCPHTLYLLESANLRAHRFQPDQLRAKMILFAFGNALAQARLLYGND-PKVLEQPVVVQSVGTDGRVFQFLVLQLNTTDLASEEGIKNLVWVDSDQLLY---QHFWCLPVIKKKVVVEPVGPTGFQPETFRKFLALYLHGA 422          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|81884465|sp|Q6AXT0.1|RM37_RAT (RecName: Full=39S ribosomal protein L37, mitochondrial; Short=L37mt; Short=MRP-L37; Flags: Precursor)

HSP 1 Score: 88.9669 bits (219), Expect = 5.281e-18
Identity = 99/425 (23.29%), Postives = 177/425 (41.65%), Query Frame = 0
Query:   58 VMHYPTLPPMPTYEG----VEWATEPSREPF----LDRKDH--------PLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQ-VELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTF---EYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEA-----------YNPKTFTTLLGLYLQGV 451
            V   P L P+ TYEG    V W  +P   P+    +D + H        PLY+++P +  H   + ++G  + QA  LTK+  ++ GLP+ VL+ +         Q++R+   I  + ++ + +  +P+R             + + PL                           +   LL+ C +  + +P L  R   ++  L   ++R    +  + +   +++   PL P     EVEATR   +    P++    +   HVY +         G+  P+ H  +  +      + +  E++  A+ L  +F  AL QAR+ +G + A VL +P+ V+ + T+G    F   QLNT DL    GVKN+ W +     +   ++    P ++            + P+TF   L LYL G 
Sbjct:   49 VYEIPGLEPI-TYEGKKHFVPWLAKPIFPPWERGWIDPRFHRAAPIHEQPLYKEQPCYIFHQRCRLLEG--MKQALWLTKTKLIE-GLPKKVLSLVDDPTNHIENQEQRVLDIISHSRLWHSTE-DIPKR-------------ETYCPL---------------------------IVDNLLQLCKSQIIKHPSLARRTSAQNCSLATTWNRESLLLQVRGTSSTMLSAKDPLPPIASREEVEATRSHVLETFYPISPTIDLQECHVY-EVKEDTGFREGYPYPHPHTLYILEKANLRPQRFLPEQL-RAKMLLFAFANALAQARLLYG-NTARVLEQPIVVQSVGTDGRVFQFLVLQLNTTDLTSSEGVKNLVWTDSDQLLY---QHFWCRPVIKKKVVVEPVGPVDFQPETFKKFLALYLHGA 422          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|152083350|sp|Q9BZE1.2|RM37_HUMAN (RecName: Full=39S ribosomal protein L37, mitochondrial; Short=L37mt; Short=MRP-L37; AltName: Full=39S ribosomal protein L2, mitochondrial; Short=L2mt; Short=MRP-L2; AltName: Full=Mitochondrial large ribosomal subunit protein mL37; Flags: Precursor)

HSP 1 Score: 83.9593 bits (206), Expect = 2.594e-16
Identity = 86/378 (22.75%), Postives = 158/378 (41.80%), Query Frame = 0
Query:   89 DHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAI--PQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTF--EYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEA-----------YNPKTFTTLLGLYLQGV 451
            +HPLY+D+  +  H   + ++G  + QA  LTK+  ++ GLP+ VL+ +  P+  +   QDE +   I    ++   +  +P+R       + PV+                                      L++ C +  + +P L  R  ++++  +  ++R    +  + S    ++   PL       E+EAT+   +    P++    +   ++Y D         G+  P  H  +  D      +        A+ +  +F  AL QAR+ +G+D A VL +PV V+ + T+G    F  FQLNT DL+ + GVKN+ W +     +   ++   LP ++            + P+TF   L LYL G 
Sbjct:   95 EHPLYKDQACYIFHHRCRLLEG--VKQALWLTKTKLIE-GLPEKVLSLVDDPRNHI-ENQDECVLNVISHARLWQTTE-EIPKRET-----YCPVI-----------------------------------VDNLIQLCKSQILKHPSLARRICVQNSTFSATWNRESLLLQVRGSGGARLSTKDPLPTIASREEIEATKNHVLETFYPISPIIDLHECNIY-DVKNDTGFQEGYPYPYPHTLYLLDKANLRPHRLQPDQLRAKMILFAFGSALAQARLLYGND-AKVLEQPVVVQSVGTDGRVFHFLVFQLNTTDLDCNEGVKNLAWVDSDQLLY---QHFWCLPVIKKRVVVEPVGPVGFKPETFRKFLALYLHGA 422          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|81879838|sp|Q921S7.1|RM37_MOUSE (RecName: Full=39S ribosomal protein L37, mitochondrial; Short=L37mt; Short=MRP-L37; Flags: Precursor)

HSP 1 Score: 83.5741 bits (205), Expect = 3.981e-16
Identity = 101/425 (23.76%), Postives = 175/425 (41.18%), Query Frame = 0
Query:   58 VMHYPTLPPMPTYEG----VEWATEPSREPFLDRKDHP------------LYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQ-VELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVY--RDANTFPVVDSGHAAPNVHLGFGFDPTF---EYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEP-----RHEFFTKCEYDQGLPTLEA----YNPKTFTTLLGLYLQGV 451
            V   P L P+ TYEG    V W   P   P+    + P            LY++EP +  H   + ++G  + QA  LTK+  ++ GLP+ VL+ +         Q++R+   I    ++ + +  +P+R             + + PL                           +   L++ C +  + +P L  R   ++  L   ++R    +  + +   +++   PL       EVEATR   +    P++    +   HVY  +D   F     G+  P+ H  +  +      + +  E++  A+ L  +F  AL QAR+ +G + A VL +P+ V+ + T+G    F   QLNT DL    GVKN+ W +      RH F+ +    + +         + P+TF   L LYL GV
Sbjct:   49 VYEIPGLEPI-TYEGKKHFVPWLARPIFPPWERGWNDPRFHRAAPIHEQTLYKEEPCYIFHQRCRLLEG--MKQALWLTKTKLIE-GLPKKVLSLVDDPANHIENQEQRVLDIISHARLWHSTE-DIPKR-------------ETYCPL---------------------------IVDSLIQLCKSQILKHPSLARRTSAQNCTLATTWNRESLLLQVRGTSSTILSAKDPLPVIASREEVEATRSHVLETFYPISPTIDLQECHVYEVKDDTGF---QEGYPYPHPHTLYFLEKANLRPQRFLPEQL-RAKMLLFAFANALAQARLLYG-NTAKVLEQPIVVQSVGTDGRVFQFLVLQLNTTDLASSEGVKNLVWTDSDQLLYRH-FWCRPVIKKKVVVEPVGPVDFQPETFRKFLALYLHGV 422          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|88932614|sp|Q5ZI69.2|RM37_CHICK (RecName: Full=39S ribosomal protein L37, mitochondrial; Short=L37mt; Short=MRP-L37; Flags: Precursor)

HSP 1 Score: 82.0333 bits (201), Expect = 1.181e-15
Identity = 93/389 (23.91%), Postives = 158/389 (40.62%), Query Frame = 0
Query:   78 EPSREPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVL--AAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTFEY--YFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLE-----------AYNPKTFTTLLGLYLQGV 451
            EP   P    +D PL ++      H   + ++G  + QA+ LTK+  VQ GLP  VL  A  P  +L   Q+E +   +    +++  +V  PRR       + PV                                   L   L+  C ++SV YP L  R +  +  +   + R    +  +    IL+    P+ P     E+ AT++  +    P++    +   +VY++ N     D G+   + H  +  +   +    F      A+ L  +F  AL +A++ +G+D   VL +P+ V+ + T+G    F  FQLNT DL  + G+KN+ W +     +   E  Q +P ++              P+TF   L LYL G 
Sbjct:   90 EPWHSPGPRYEDMPLRKERGCFICHQRVRMLEG--VRQAQWLTKTKLVQ-GLPAKVLSIAENPAYQL-QEQEEAVHRAVAHARLWETTEVS-PRREK-----YCPV-----------------------------------LFEDLIHLCRSMSVKYPSLARRMLARNYRIAATWERESTLLQIRGLNGILMNSMTPIPPVASKEEILATKDHVLETFYPISPTIDLQEVNVYQELNDTGFKD-GYPYSHPHTLYFLESANKRPNRFRPEQLRAKMLMFAFGNALAKAKVLYGND-PQVLEQPIVVQSVGTDGQLFQFLVFQLNTTDLVSNDGIKNLVWIDSDQNLY---ESAQCVPEVKKRVVTKPTGIYGLQPETFKKFLALYLHGT 428          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|676460063|ref|XP_009055501.1| (hypothetical protein LOTGIDRAFT_228627 [Lottia gigantea] >gi|556105227|gb|ESO93879.1| hypothetical protein LOTGIDRAFT_228627 [Lottia gigantea])

HSP 1 Score: 147.517 bits (371), Expect = 5.707e-36
Identity = 113/415 (27.23%), Postives = 202/415 (48.67%), Query Frame = 0
Query:   47 ERGIPVLTP--EDVMHYPTLPPMPTYEGVEWATEPSREPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELL-DRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPV-VDSGHAAPNVHLGFGFDPTFEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLP---------TLEAYNPKTFTTLLGLYL 448
            ++ IP++ P  E+ +     PP+P  + +++   P+       K++P Y + P +      +  +G  + QA  LTKSV+ + G PQ + + I ++ +   +++ +Q  I ++ ++D+  V LP+R  + ++G+                      K  RE+GIP  R+     +GL+R C   S+ YP +L DR ++ D+ L   +   ++RV F+     L+   RP+  F D  +VE ++E  +PD+ P++   S+   H Y   N   +  D  H+ P  H  F  +  F   + E    A ++  +F  A+  A+  +G DV  VLPEPV V+ +  +   ++FT FQLNTLDL++  G+KN  W +  +  F   +Y    P            ++NP+ F  LL ++L
Sbjct:   42 QKEIPIIDPLKEEAVKEEWKPPVP--DDLQFKQAPTV------KEYPNYNENPAYIYIRSCRLTEG--MKQACILTKSVQCE-GFPQPIQSLIGKIHI-DNEEKLLQRCIMQSQVWDSTHVKLPKRGDLENVGF----------------------KFTREYGIPRARRMDVFVQGLMRLCQLTSLQYPSVLTDRYIVSDSYLTSNYLFKEKRVSFEGKCKYLVLSDRPMLRFADVDQVEESKEHELPDMYPISPLISLQKRHDYTLQNIAGLEKDFTHSHP--HTIFLMNTNF---WTESQRQASAMMFAFGHAVASAKNLYGEDVK-VLPEPVCVQCVNASETTLNFTFFQLNTLDLSNSDGIKNFVWFDTSNHLF---QYQLRQPWKGPDYLSTIYHSFNPEGFHKLLAVFL 413          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|987913523|ref|XP_015432607.1| (PREDICTED: 39S ribosomal protein L37, mitochondrial [Dufourea novaeangliae] >gi|987913525|ref|XP_015432608.1| PREDICTED: 39S ribosomal protein L37, mitochondrial [Dufourea novaeangliae] >gi|987913527|ref|XP_015432609.1| PREDICTED: 39S ribosomal protein L37, mitochondrial [Dufourea novaeangliae])

HSP 1 Score: 145.591 bits (366), Expect = 1.891e-35
Identity = 121/444 (27.25%), Postives = 206/444 (46.40%), Query Frame = 0
Query:   19 LCHKHWNNR-----WQLGRHQRIKNRDFARRIAERGIPVLTPEDVMHYPTLPPMPTYEGVEWATEPSREPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAV---LAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTFEY-------YFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLY 447
            + HKH   R     WQ GR + +   +    +  +G  V    +V+     PP P +  V+  +    +P    ++  +Y++   H LH  +         QA  LTK++++   +P  V   +A IP+       D+ +Q  +  + ++DA QV LP+            +    RP        SW     R++GI + RK  N+T+  L+ C++L        +R+++ D  L+    +    + F L + +++T   PL P +D+    A  EL +PD+ PL+C   +   + Y++ + +P+V +     N+H  F  +   E         F ++++A RSL  SF  A   AR RFG DV   LPEPV V+ I ++     F+ +QLNTLD++   G+KN +W  P  + + K +Y+ G P L  YN + F   L  Y
Sbjct:    6 VLHKHHLGRAIRMMWQTGRTRPVPVTNAEEILVSQGFKVEDALEVIK----PPKP-FPRVDVPSIEHVDPDWKERNCLIYKEH--HLLHGGTS--------QALQLTKTLKIDDEIPSRVKDLIADIPE-----HIDDIVQRNVYTSTIYDAQQVKLPK------------LKDPNRP--------SWV--FPRQYGITSTRKMHNITKKFLQLCESLC-GLNIAQNRSMVHDGILSMCIDKELDVINFSLKMDLIMTSLMPLTPIVDA---RANSELEIPDIHPLHCTVGIVQTNSYKNEDIYPIV-TNSVMKNIHTIFINNNPEEVKNITELPVFEDQIHA-RSLIESFTAAGTYARQRFGLDVKE-LPEPVVVQCIQSDNQNFHFSVYQLNTLDVDGVQGIKNFWWSAPTLKLYEKSKYENGKPCLYEYNNEVFKRFLAFY 400          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1080044429|ref|XP_018563370.1| (39S ribosomal protein L37, mitochondrial [Anoplophora glabripennis])

HSP 1 Score: 143.665 bits (361), Expect = 9.533e-35
Identity = 127/433 (29.33%), Postives = 206/433 (47.58%), Query Frame = 0
Query:   23 HWNNRWQLGRHQRIKNRDFARRIAERGIPVLTPEDVMHYPTLPPMPTYEGVEWATEPSREPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDER-IQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQF-FSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFG------FDPTFEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLY 447
            H+   W++   ++  N    + + ER IP   PED++    +     +E VE     ++ P +  K HP + D PV +   ++  ++G  L QAK LTKSVEV+ GLP+ ++     +E  P+  ++ ++  I  + +FDA Q  LP ++  P            RP        +W     R +GI   R +  L   LL+  ++ +    +L++   L ++ L  F F R    + F+LS   +IT  +PL+P        +T  L +PD+ P+    ++  +++Y+   +FP + S  +  + H  F           FE    E     RSL  +F ++   AR +FG DV G LP+PV+V+ + T+G    F  FQLNTLDL +   VKNV++  P    + KC Y  G PTLE YN +    L   Y
Sbjct:   15 HFEKHWRVQGKRKPLNTGAEKILKERNIPFCQPEDIIQEKRV-----FEKVEIVGFKNK-PVVFDKTHPDWHDRPVLSYKDNNVLLEG--LTQAKVLTKSVEVKEGLPENIV-----LEDIPKDIKKHVKNIILSSCVFDAEQKKLP-KIKDPE-----------RP--------AWN--FPRFYGITQNRANKLLMSRLLQLIES-TCGRDDLVNERYLFNDLLFSFPFERHGDLIQFQLSGDTVITSSKPLSPITGV----STESLELPDITPVKPTITLVKDNIYKLEKSFP-IKSFVSKLHPHTIFTRYNKEEVKNLFEEEVTEAQIFGRSLLKAFTVSASYARYQFGDDV-GQLPKPVTVQSVQTDGQFYHFGVFQLNTLDL-EKGDVKNVWYQTPLLYLYDKCCYVLGKPTLEGYNKEVVKHLYAFY 404          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|970911312|ref|XP_015121867.1| (PREDICTED: 39S ribosomal protein L37, mitochondrial isoform X2 [Diachasma alloeum] >gi|970911314|ref|XP_015121868.1| PREDICTED: 39S ribosomal protein L37, mitochondrial isoform X2 [Diachasma alloeum] >gi|970911316|ref|XP_015121869.1| PREDICTED: 39S ribosomal protein L37, mitochondrial isoform X2 [Diachasma alloeum] >gi|970911318|ref|XP_015121870.1| PREDICTED: 39S ribosomal protein L37, mitochondrial isoform X2 [Diachasma alloeum] >gi|970911320|ref|XP_015121871.1| PREDICTED: 39S ribosomal protein L37, mitochondrial isoform X2 [Diachasma alloeum])

HSP 1 Score: 143.28 bits (360), Expect = 1.470e-34
Identity = 117/445 (26.29%), Postives = 195/445 (43.82%), Query Frame = 0
Query:   17 ELLCHKHWNN----RWQLGRHQRIKNRDFARRIAERGIPVLTPEDVMHYPTLPPMPTYEGVEWAT----EPSREPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQF-FSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSG-----HAAPNVHLGFGFDPTFEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLY 447
            + LC +H        W +   +R         +A+ GIP++ P D+++       P  E ++ +      P++ P    ++HP Y+  P   +  H   +QG++  QA+ LTKS+ ++  LP+ V + +         DE +Q  IR + ++DA Q  +P+R       W            YP           R++G+  +RKS NLT  +L+ C+ L   +     R ++  NGL Q    +    V F + + +L+T   PL P   +A+     +  +P+L PL   A +   H Y     +P+         H     H         E    +    ARSL  +F      AR ++G  V   LPEP++V+ ++ +G    F+ FQLNTL++ +  G  N +W  P+   F + +Y+   P LE YNP  F  LL  Y
Sbjct:    5 QALCRQHLGRMIKFNWFMATKKRPLETHTEFHLAKMGIPIVDPLDIVN-------PIKERIDVSQYFEHMPNQPPIPKDENHPDYKLRPCLKVMGHDLLVQGTQ--QAQVLTKSLLIKDSLPEKVESLLENTS--EEVDETVQRIIRSSNIYDAHQEKIPKRKNPEKPAWN-----------YP-----------RDYGLTDIRKSRNLTIKMLQLCETL-CGFNVAQQRQIIH-NGLVQVPLVKDGDLVEFSMKMDLLMTSMIPLTPMGSTADAA---DKTLPELYPLLSTAGLRRYHFYDLKLLYPIAQGSPWSTPHTIFIYHDCQRVKNLTEIPVEQDQLFARSLIEAFATTATYARQKYGDSVED-LPEPLAVQCVHVDGQNFHFSVFQLNTLNIEEKEGKMNYWWCSPQISLFEQAKYENARPVLEGYNPDVFKRLLAFY 410          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1028711457|ref|XP_008183902.2| (PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L37, mitochondrial [Acyrthosiphon pisum])

HSP 1 Score: 142.895 bits (359), Expect = 2.220e-34
Identity = 110/434 (25.35%), Postives = 199/434 (45.85%), Query Frame = 0
Query:   27 RWQLGRHQRIKNRDFARRIAERGIPVLTPEDVMHYPTLPPMP--TYEGVEWATEPSR-EPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVY-RDANTFPVVDSGHAAPNVHLGF-GFDPT-----FEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLYLQG 450
            +W++ R + +   +  + +  R IP++  +  +H P          E       P + EP L+   HPL+ D+P      H+  + G  L+QAK  T ++E + GLP+     + +    P QDE IQ  I  + ++DA+Q  LP R       W                      K  R++GIP  R++  +   +L+ C++   +     ++ + +D  L      +   +  +  + +L     P  P +D  + +      +PDL PL+   S+   ++Y +D    P+    +   NVH  F  ++ T     +E    E     RSL   +  A+  A+ ++G +V   LPEP++++ + TN     F+ FQLN+LD  +++G+KN++W  P    + KC +D+G+P L+ YNP+ F  +L  Y+ G
Sbjct:   19 QWRVQRKKTLIETNAEKVLTSRSIPIIDAKQFLHEPLFEAQKQDVKEIFNNIVGPIKLEPKLNNT-HPLWNDDPCLVYGDHNVLVHG--LEQAKVFTNAIEPEPGLPK-YFKELYEAYRLPNQDEHIQRIIIASILYDAVQEKLPIRKDPKRPAW----------------------KFPRDYGIPDKRRNNLIVSRMLQLCESSVGNMSS--NKVIAKDVFLKCLCKEMHISLNLRADLLLLSDTSLP--PVMDDIQGD------LPDLSPLDYKISLDEINIYHKDEFISPITGKFN---NVHTAFIHYNETEVKNLYETPVLETQIMGRSLMKCYAFAVANAKSKYGENVKE-LPEPITLQCVQTNSQWFHFSIFQLNSLDGPEENGMKNIYWQTPLLNLYKKCVFDEGVPVLDDYNPEVFKNVLSFYMNG 412          
The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000041533.060e-9337.58supercontig:LSalAtl2s:LSalAtl2s219:347626:350474:1... [more]
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BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
gi|288559136|sp|A4FUC0.1|RM37_BOVIN5.247e-2024.34RecName: Full=39S ribosomal protein L37, mitochond... [more]
gi|81884465|sp|Q6AXT0.1|RM37_RAT5.281e-1823.29RecName: Full=39S ribosomal protein L37, mitochond... [more]
gi|152083350|sp|Q9BZE1.2|RM37_HUMAN2.594e-1622.75RecName: Full=39S ribosomal protein L37, mitochond... [more]
gi|81879838|sp|Q921S7.1|RM37_MOUSE3.981e-1623.76RecName: Full=39S ribosomal protein L37, mitochond... [more]
gi|88932614|sp|Q5ZI69.2|RM37_CHICK1.181e-1523.91RecName: Full=39S ribosomal protein L37, mitochond... [more]
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BLAST of 39s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|676460063|ref|XP_009055501.1|5.707e-3627.23hypothetical protein LOTGIDRAFT_228627 [Lottia gig... [more]
gi|987913523|ref|XP_015432607.1|1.891e-3527.25PREDICTED: 39S ribosomal protein L37, mitochondria... [more]
gi|1080044429|ref|XP_018563370.1|9.533e-3529.3339S ribosomal protein L37, mitochondrial [Anoploph... [more]
gi|970911312|ref|XP_015121867.1|1.470e-3426.29PREDICTED: 39S ribosomal protein L37, mitochondria... [more]
gi|1028711457|ref|XP_008183902.2|2.220e-3425.35PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal prot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold180_size281610supercontigscaffold180_size281610:77826..79504 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold180_size281610-snap-gene-0.40-mRNA-1maker-scaffold180_size281610-snap-gene-0.40-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold180_size281610:77826..79504-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold180_size281610-snap-gene-0.40 ID=maker-scaffold180_size281610-snap-gene-0.40|Name=39s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=1679bp|location=Sequence derived from alignment at scaffold180_size281610:77826..79504- (Tigriopus kingsejongensis)
CTGGTCCATGTCAACACAGAGTGAACGGAACACTCAAGTCCACCTCGAGT CCATCCGGAGCACGCCATGGTCGCCCGAGTGGACTGAAGTGGGTGATCGA GAGTCAAGATGCGCCTGACGTGGGTGGCCTGGGGCCGAAAAGGGATCAAT CACTGGGAATTGCTTTGCCACAAACATTGGAACAACCGATGGCAATTGGG ACGGCATCAGCGAATCAAGAACCGGGACTTCGCTCGCCGGATCGCCGAGC GCGGGATCCCCGTCCTCACCCCCGAGGTGAGCCTCGGAGAAATGCCTAAT TCACGCCTACGCCAATGGATGGTAATGGGCAAGTGTCTGGACAATTACAG GATGTCATGCACTACCCCACTTTACCGCCCATGCCCACCTACGAAGGGGT GGAGTGGGCCACAGAGCCATCCCGCGAGCCTTTTCTCGACCGGAAGGACC ATCCACTCTACCAAGACGAGCCGGTTCACACGTTGCACTGCCACTCCAAG TTCATCCAGGGCAGTGAACTGGACCAGGCCAAGGTAGGGATTTTGCCCCA CCTCGAGGTGCGGTTACGACCGACCGCTGAACGCTGTTTAATTGCAGAGC TTAACCAAGTCGGTGGAGGTTCAAGCCGGCTTGCCTCAGGCGGTCCTGGC CGCCATTCCCCAGGTGGAGCTCTTCCCTCGTCAAGATGAGCGCATCCAGA CCACCATCCGGGAGACCTTCATGTTTGACGCCCTACAAGTCCCCCTGCCT CGCCGGGTGGCTGTGCCTCACATTGGTTGGACGCCCGTCGTGGATCAAAT GTTCCGCCCCTTGCCCTACCCGGAACCCAAATATTCGTGGCAGCGGAAAT TGGCCCGGGAATTCGGCATTCCCACCATGCGCAAAAGGTAATGGGTGGGA TCTAGGATCAGCTCCGACTGACGCGGTTCATGGCTTTTTCCGGTCCCATA GTTTCAACCTAACGCGGGGCCTCTTGCGCTACTGCGATGCGCTGTCCGTC GATTATCCGGAGCTCCTCGATCGTGCCGTTTTGGAAGATAATGGCCTCAA CCAATTCTTCTCGCGCCTCGACCGACGGGTTCTGTTCAAGCTCAGCATCC CCATCCTGATCACCGACCCCCGGCCGTTAGCTCCTTTTCTCGACTCGGCC GAGGTCGAAGCCACCCGGGAGCTGGCGGTCCCGGATTTGGATCCGCTCAA CTGCTTTGCCTCGATGTGGCCCAATCACGTGTACCGCGATGCCAACACAT TTCCCGTCGTCGACTCTGGTCATGCCGCGCCCAATGTCCATCTCGGATTC GGCTTTGATCCCACATTCGAGTACTACTTCAACGAGCGGGTCTATGCCGC CCGGAGTTTGACCAGCTCCTTTCTGCTAGCTTTGGGACAGGCCCGAATGC GCTTCGGGTCTGATGTGGCCGGGGTCCTGCCCGAGCCGGTTTCGGTGAAA TTCATCTACACCAATGGCTTCCGCATGAGCTTCACCGCCTTCCAACTGAA CACCTTGGATCTGAACGACGACTCGGGCGTCAAGAACGTGTTTTGGCACG AGCCCAGGCACGAATTCTTCACCAAGTGCGAATATGATCAAGGCTTGCCC ACGTTGGAGGCCTACAATCCGAAGACATTTACCACACTCCTCGGCTTGTA CTTGCAGGGAGTGAACAAACTCTAGTAGC
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Synonyms
The feature '39s ribosomal protein mitochondrial' has the following synonyms
Synonym
Tk11864
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