39s ribosomal protein mitochondrial, maker-scaffold180_size281610-snap-gene-0.40 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Match: EMLSAG00000004153 (supercontig:LSalAtl2s:LSalAtl2s219:347626:350474:1 gene:EMLSAG00000004153 transcript:EMLSAT00000004153 description:"maker-LSalAtl2s219-augustus-gene-3.25") HSP 1 Score: 288.115 bits (736), Expect = 3.060e-93 Identity = 171/455 (37.58%), Postives = 248/455 (54.51%), Query Frame = 0 Query: 1 MRLTWVAWGRK---GINHWELLCHKHWNNRWQLGRHQRIKNRDFARRIAERGIPVLTPEDVMHYPTLPPMPTYEGVEWATEPS--REPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTFEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPR-HEFFTKCEYDQGLPTLEAYNPKTFTTLLGLYLQ 449 MRLT V + RK NH ++NN WQ GR + + D + + GIPV++P+DV+ + P YE E+ S RE + HPL++D PVHT + F +LD AK+LTK+VE+ GLP ++ +I + L ++ I+ET MFDA+Q LP VP IGW PV D+M PYP SWQ K AR++GIP R + NLTRGL R D + ++L R E L Q+F+RL + +P + P + P+ D+ +++ L +PD+ P+ +WP +VYR+ N P++D + + +P + NE +AA SL SF ALGQA + +GS+ + VLPEP++V FI T+G + +AFQLNTL+L+ + GVKN+FWHE + CEY QG P E+ N F LL +Y + Sbjct: 1 MRLTRVLFRRKLPVRRNH-----PINFNNAWQEGRTLPLTDTDDQKVLTSMGIPVVSPQDVIQSSYVMP---YEVPEYDPPKSIIRENLPKDESHPLWKDRPVHTFGDRTYFPVNHQLDLAKNLTKTVELDVGLPSRLIQSIEKTSLSEEALSSVEDMIKETQMFDAIQKKLPFNYKVPFIGWHPVNDRMSSKTPYPV-TMSWQYKEARKYGIPLPRSTLNLTRGLFRLLDQFCPEAKDILHRVNHEKQILRQYFNRLGSYTRVSVHLPFSVWSPHLIKPYADTNTTKSSISLKLPDIHPMEPQVGLWPINVYREENNLPIMDGSLLRAHTLVNNYTNPVPDLA-NEDQFAANSLMLSFASALGQAXLLYGSEFSDVLPEPITVHFINTDGKKFHISAFQLNTLELSTNDGVKNIFWHEKEMSSLYDVCEYVQGRPMFESLNSSLFKKLLAMYAE 445
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|288559136|sp|A4FUC0.1|RM37_BOVIN (RecName: Full=39S ribosomal protein L37, mitochondrial; Short=L37mt; Short=MRP-L37; Flags: Precursor) HSP 1 Score: 95.1301 bits (235), Expect = 5.247e-20 Identity = 92/378 (24.34%), Postives = 155/378 (41.01%), Query Frame = 0 Query: 88 KDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLA-AIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTF--EYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLE-----------AYNPKTFTTLLGLYLQGV 451 ++HPLY+DE + H + ++G + QA LTK+ ++ GLP+ VL+ A QDER+ I ++ + + +P+R + PV+ L++ C + + +P L R + N L+ + R + S + PL P EVEAT+ + P++ S+ H+Y D N G+ P H + + + F A+ + +F AL QAR+ +G+D VL +PV V+ + T+G F QLNT DL + G+KN+ W + + ++ LP ++ + P+TF L LYL G Sbjct: 94 QEHPLYKDEVCYIFHQRCRLLEG--VKQALWLTKTKLIE-GLPEKVLSLADNPRNHIENQDERVLNVISHARLWHSTE-DIPKRET-----YCPVI-----------------------------------VDSLIQLCKSQILKHPSLARRICAQKNMLSTTWKRESTLIQVHGSSGAQLNAKDPLPPIASREEVEATKNHVLETFSPISPTISLQECHIY-DVNDDTGFREGYPYPCPHTLYLLESANLRAHRFQPDQLRAKMILFAFGNALAQARLLYGND-PKVLEQPVVVQSVGTDGRVFQFLVLQLNTTDLASEEGIKNLVWVDSDQLLY---QHFWCLPVIKKKVVVEPVGPTGFQPETFRKFLALYLHGA 422
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|81884465|sp|Q6AXT0.1|RM37_RAT (RecName: Full=39S ribosomal protein L37, mitochondrial; Short=L37mt; Short=MRP-L37; Flags: Precursor) HSP 1 Score: 88.9669 bits (219), Expect = 5.281e-18 Identity = 99/425 (23.29%), Postives = 177/425 (41.65%), Query Frame = 0 Query: 58 VMHYPTLPPMPTYEG----VEWATEPSREPF----LDRKDH--------PLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQ-VELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTF---EYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEA-----------YNPKTFTTLLGLYLQGV 451 V P L P+ TYEG V W +P P+ +D + H PLY+++P + H + ++G + QA LTK+ ++ GLP+ VL+ + Q++R+ I + ++ + + +P+R + + PL + LL+ C + + +P L R ++ L ++R + + + +++ PL P EVEATR + P++ + HVY + G+ P+ H + + + + E++ A+ L +F AL QAR+ +G + A VL +P+ V+ + T+G F QLNT DL GVKN+ W + + ++ P ++ + P+TF L LYL G Sbjct: 49 VYEIPGLEPI-TYEGKKHFVPWLAKPIFPPWERGWIDPRFHRAAPIHEQPLYKEQPCYIFHQRCRLLEG--MKQALWLTKTKLIE-GLPKKVLSLVDDPTNHIENQEQRVLDIISHSRLWHSTE-DIPKR-------------ETYCPL---------------------------IVDNLLQLCKSQIIKHPSLARRTSAQNCSLATTWNRESLLLQVRGTSSTMLSAKDPLPPIASREEVEATRSHVLETFYPISPTIDLQECHVY-EVKEDTGFREGYPYPHPHTLYILEKANLRPQRFLPEQL-RAKMLLFAFANALAQARLLYG-NTARVLEQPIVVQSVGTDGRVFQFLVLQLNTTDLTSSEGVKNLVWTDSDQLLY---QHFWCRPVIKKKVVVEPVGPVDFQPETFKKFLALYLHGA 422
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|152083350|sp|Q9BZE1.2|RM37_HUMAN (RecName: Full=39S ribosomal protein L37, mitochondrial; Short=L37mt; Short=MRP-L37; AltName: Full=39S ribosomal protein L2, mitochondrial; Short=L2mt; Short=MRP-L2; AltName: Full=Mitochondrial large ribosomal subunit protein mL37; Flags: Precursor) HSP 1 Score: 83.9593 bits (206), Expect = 2.594e-16 Identity = 86/378 (22.75%), Postives = 158/378 (41.80%), Query Frame = 0 Query: 89 DHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAI--PQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTF--EYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEA-----------YNPKTFTTLLGLYLQGV 451 +HPLY+D+ + H + ++G + QA LTK+ ++ GLP+ VL+ + P+ + QDE + I ++ + +P+R + PV+ L++ C + + +P L R ++++ + ++R + + S ++ PL E+EAT+ + P++ + ++Y D G+ P H + D + A+ + +F AL QAR+ +G+D A VL +PV V+ + T+G F FQLNT DL+ + GVKN+ W + + ++ LP ++ + P+TF L LYL G Sbjct: 95 EHPLYKDQACYIFHHRCRLLEG--VKQALWLTKTKLIE-GLPEKVLSLVDDPRNHI-ENQDECVLNVISHARLWQTTE-EIPKRET-----YCPVI-----------------------------------VDNLIQLCKSQILKHPSLARRICVQNSTFSATWNRESLLLQVRGSGGARLSTKDPLPTIASREEIEATKNHVLETFYPISPIIDLHECNIY-DVKNDTGFQEGYPYPYPHTLYLLDKANLRPHRLQPDQLRAKMILFAFGSALAQARLLYGND-AKVLEQPVVVQSVGTDGRVFHFLVFQLNTTDLDCNEGVKNLAWVDSDQLLY---QHFWCLPVIKKRVVVEPVGPVGFKPETFRKFLALYLHGA 422
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|81879838|sp|Q921S7.1|RM37_MOUSE (RecName: Full=39S ribosomal protein L37, mitochondrial; Short=L37mt; Short=MRP-L37; Flags: Precursor) HSP 1 Score: 83.5741 bits (205), Expect = 3.981e-16 Identity = 101/425 (23.76%), Postives = 175/425 (41.18%), Query Frame = 0 Query: 58 VMHYPTLPPMPTYEG----VEWATEPSREPFLDRKDHP------------LYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQ-VELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVY--RDANTFPVVDSGHAAPNVHLGFGFDPTF---EYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEP-----RHEFFTKCEYDQGLPTLEA----YNPKTFTTLLGLYLQGV 451 V P L P+ TYEG V W P P+ + P LY++EP + H + ++G + QA LTK+ ++ GLP+ VL+ + Q++R+ I ++ + + +P+R + + PL + L++ C + + +P L R ++ L ++R + + + +++ PL EVEATR + P++ + HVY +D F G+ P+ H + + + + E++ A+ L +F AL QAR+ +G + A VL +P+ V+ + T+G F QLNT DL GVKN+ W + RH F+ + + + + P+TF L LYL GV Sbjct: 49 VYEIPGLEPI-TYEGKKHFVPWLARPIFPPWERGWNDPRFHRAAPIHEQTLYKEEPCYIFHQRCRLLEG--MKQALWLTKTKLIE-GLPKKVLSLVDDPANHIENQEQRVLDIISHARLWHSTE-DIPKR-------------ETYCPL---------------------------IVDSLIQLCKSQILKHPSLARRTSAQNCTLATTWNRESLLLQVRGTSSTILSAKDPLPVIASREEVEATRSHVLETFYPISPTIDLQECHVYEVKDDTGF---QEGYPYPHPHTLYFLEKANLRPQRFLPEQL-RAKMLLFAFANALAQARLLYG-NTAKVLEQPIVVQSVGTDGRVFQFLVLQLNTTDLASSEGVKNLVWTDSDQLLYRH-FWCRPVIKKKVVVEPVGPVDFQPETFRKFLALYLHGV 422
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|88932614|sp|Q5ZI69.2|RM37_CHICK (RecName: Full=39S ribosomal protein L37, mitochondrial; Short=L37mt; Short=MRP-L37; Flags: Precursor) HSP 1 Score: 82.0333 bits (201), Expect = 1.181e-15 Identity = 93/389 (23.91%), Postives = 158/389 (40.62%), Query Frame = 0 Query: 78 EPSREPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVL--AAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTFEY--YFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLE-----------AYNPKTFTTLLGLYLQGV 451 EP P +D PL ++ H + ++G + QA+ LTK+ VQ GLP VL A P +L Q+E + + +++ +V PRR + PV L L+ C ++SV YP L R + + + + R + + IL+ P+ P E+ AT++ + P++ + +VY++ N D G+ + H + + + F A+ L +F AL +A++ +G+D VL +P+ V+ + T+G F FQLNT DL + G+KN+ W + + E Q +P ++ P+TF L LYL G Sbjct: 90 EPWHSPGPRYEDMPLRKERGCFICHQRVRMLEG--VRQAQWLTKTKLVQ-GLPAKVLSIAENPAYQL-QEQEEAVHRAVAHARLWETTEVS-PRREK-----YCPV-----------------------------------LFEDLIHLCRSMSVKYPSLARRMLARNYRIAATWERESTLLQIRGLNGILMNSMTPIPPVASKEEILATKDHVLETFYPISPTIDLQEVNVYQELNDTGFKD-GYPYSHPHTLYFLESANKRPNRFRPEQLRAKMLMFAFGNALAKAKVLYGND-PQVLEQPIVVQSVGTDGQLFQFLVFQLNTTDLVSNDGIKNLVWIDSDQNLY---ESAQCVPEVKKRVVTKPTGIYGLQPETFKKFLALYLHGT 428
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|676460063|ref|XP_009055501.1| (hypothetical protein LOTGIDRAFT_228627 [Lottia gigantea] >gi|556105227|gb|ESO93879.1| hypothetical protein LOTGIDRAFT_228627 [Lottia gigantea]) HSP 1 Score: 147.517 bits (371), Expect = 5.707e-36 Identity = 113/415 (27.23%), Postives = 202/415 (48.67%), Query Frame = 0 Query: 47 ERGIPVLTP--EDVMHYPTLPPMPTYEGVEWATEPSREPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELL-DRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPV-VDSGHAAPNVHLGFGFDPTFEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLP---------TLEAYNPKTFTTLLGLYL 448 ++ IP++ P E+ + PP+P + +++ P+ K++P Y + P + + +G + QA LTKSV+ + G PQ + + I ++ + +++ +Q I ++ ++D+ V LP+R + ++G+ K RE+GIP R+ +GL+R C S+ YP +L DR ++ D+ L + ++RV F+ L+ RP+ F D +VE ++E +PD+ P++ S+ H Y N + D H+ P H F + F + E A ++ +F A+ A+ +G DV VLPEPV V+ + + ++FT FQLNTLDL++ G+KN W + + F +Y P ++NP+ F LL ++L Sbjct: 42 QKEIPIIDPLKEEAVKEEWKPPVP--DDLQFKQAPTV------KEYPNYNENPAYIYIRSCRLTEG--MKQACILTKSVQCE-GFPQPIQSLIGKIHI-DNEEKLLQRCIMQSQVWDSTHVKLPKRGDLENVGF----------------------KFTREYGIPRARRMDVFVQGLMRLCQLTSLQYPSVLTDRYIVSDSYLTSNYLFKEKRVSFEGKCKYLVLSDRPMLRFADVDQVEESKEHELPDMYPISPLISLQKRHDYTLQNIAGLEKDFTHSHP--HTIFLMNTNF---WTESQRQASAMMFAFGHAVASAKNLYGEDVK-VLPEPVCVQCVNASETTLNFTFFQLNTLDLSNSDGIKNFVWFDTSNHLF---QYQLRQPWKGPDYLSTIYHSFNPEGFHKLLAVFL 413
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|987913523|ref|XP_015432607.1| (PREDICTED: 39S ribosomal protein L37, mitochondrial [Dufourea novaeangliae] >gi|987913525|ref|XP_015432608.1| PREDICTED: 39S ribosomal protein L37, mitochondrial [Dufourea novaeangliae] >gi|987913527|ref|XP_015432609.1| PREDICTED: 39S ribosomal protein L37, mitochondrial [Dufourea novaeangliae]) HSP 1 Score: 145.591 bits (366), Expect = 1.891e-35 Identity = 121/444 (27.25%), Postives = 206/444 (46.40%), Query Frame = 0 Query: 19 LCHKHWNNR-----WQLGRHQRIKNRDFARRIAERGIPVLTPEDVMHYPTLPPMPTYEGVEWATEPSREPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAV---LAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTFEY-------YFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLY 447 + HKH R WQ GR + + + + +G V +V+ PP P + V+ + +P ++ +Y++ H LH + QA LTK++++ +P V +A IP+ D+ +Q + + ++DA QV LP+ + RP SW R++GI + RK N+T+ L+ C++L +R+++ D L+ + + F L + +++T PL P +D+ A EL +PD+ PL+C + + Y++ + +P+V + N+H F + E F ++++A RSL SF A AR RFG DV LPEPV V+ I ++ F+ +QLNTLD++ G+KN +W P + + K +Y+ G P L YN + F L Y Sbjct: 6 VLHKHHLGRAIRMMWQTGRTRPVPVTNAEEILVSQGFKVEDALEVIK----PPKP-FPRVDVPSIEHVDPDWKERNCLIYKEH--HLLHGGTS--------QALQLTKTLKIDDEIPSRVKDLIADIPE-----HIDDIVQRNVYTSTIYDAQQVKLPK------------LKDPNRP--------SWV--FPRQYGITSTRKMHNITKKFLQLCESLC-GLNIAQNRSMVHDGILSMCIDKELDVINFSLKMDLIMTSLMPLTPIVDA---RANSELEIPDIHPLHCTVGIVQTNSYKNEDIYPIV-TNSVMKNIHTIFINNNPEEVKNITELPVFEDQIHA-RSLIESFTAAGTYARQRFGLDVKE-LPEPVVVQCIQSDNQNFHFSVYQLNTLDVDGVQGIKNFWWSAPTLKLYEKSKYENGKPCLYEYNNEVFKRFLAFY 400
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1080044429|ref|XP_018563370.1| (39S ribosomal protein L37, mitochondrial [Anoplophora glabripennis]) HSP 1 Score: 143.665 bits (361), Expect = 9.533e-35 Identity = 127/433 (29.33%), Postives = 206/433 (47.58%), Query Frame = 0 Query: 23 HWNNRWQLGRHQRIKNRDFARRIAERGIPVLTPEDVMHYPTLPPMPTYEGVEWATEPSREPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDER-IQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQF-FSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFG------FDPTFEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLY 447 H+ W++ ++ N + + ER IP PED++ + +E VE ++ P + K HP + D PV + ++ ++G L QAK LTKSVEV+ GLP+ ++ +E P+ ++ ++ I + +FDA Q LP ++ P RP +W R +GI R + L LL+ ++ + +L++ L ++ L F F R + F+LS +IT +PL+P +T L +PD+ P+ ++ +++Y+ +FP + S + + H F FE E RSL +F ++ AR +FG DV G LP+PV+V+ + T+G F FQLNTLDL + VKNV++ P + KC Y G PTLE YN + L Y Sbjct: 15 HFEKHWRVQGKRKPLNTGAEKILKERNIPFCQPEDIIQEKRV-----FEKVEIVGFKNK-PVVFDKTHPDWHDRPVLSYKDNNVLLEG--LTQAKVLTKSVEVKEGLPENIV-----LEDIPKDIKKHVKNIILSSCVFDAEQKKLP-KIKDPE-----------RP--------AWN--FPRFYGITQNRANKLLMSRLLQLIES-TCGRDDLVNERYLFNDLLFSFPFERHGDLIQFQLSGDTVITSSKPLSPITGV----STESLELPDITPVKPTITLVKDNIYKLEKSFP-IKSFVSKLHPHTIFTRYNKEEVKNLFEEEVTEAQIFGRSLLKAFTVSASYARYQFGDDV-GQLPKPVTVQSVQTDGQFYHFGVFQLNTLDL-EKGDVKNVWYQTPLLYLYDKCCYVLGKPTLEGYNKEVVKHLYAFY 404
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|970911312|ref|XP_015121867.1| (PREDICTED: 39S ribosomal protein L37, mitochondrial isoform X2 [Diachasma alloeum] >gi|970911314|ref|XP_015121868.1| PREDICTED: 39S ribosomal protein L37, mitochondrial isoform X2 [Diachasma alloeum] >gi|970911316|ref|XP_015121869.1| PREDICTED: 39S ribosomal protein L37, mitochondrial isoform X2 [Diachasma alloeum] >gi|970911318|ref|XP_015121870.1| PREDICTED: 39S ribosomal protein L37, mitochondrial isoform X2 [Diachasma alloeum] >gi|970911320|ref|XP_015121871.1| PREDICTED: 39S ribosomal protein L37, mitochondrial isoform X2 [Diachasma alloeum]) HSP 1 Score: 143.28 bits (360), Expect = 1.470e-34 Identity = 117/445 (26.29%), Postives = 195/445 (43.82%), Query Frame = 0 Query: 17 ELLCHKHWNN----RWQLGRHQRIKNRDFARRIAERGIPVLTPEDVMHYPTLPPMPTYEGVEWAT----EPSREPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQF-FSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSG-----HAAPNVHLGFGFDPTFEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLY 447 + LC +H W + +R +A+ GIP++ P D+++ P E ++ + P++ P ++HP Y+ P + H +QG++ QA+ LTKS+ ++ LP+ V + + DE +Q IR + ++DA Q +P+R W YP R++G+ +RKS NLT +L+ C+ L + R ++ NGL Q + V F + + +L+T PL P +A+ + +P+L PL A + H Y +P+ H H E + ARSL +F AR ++G V LPEP++V+ ++ +G F+ FQLNTL++ + G N +W P+ F + +Y+ P LE YNP F LL Y Sbjct: 5 QALCRQHLGRMIKFNWFMATKKRPLETHTEFHLAKMGIPIVDPLDIVN-------PIKERIDVSQYFEHMPNQPPIPKDENHPDYKLRPCLKVMGHDLLVQGTQ--QAQVLTKSLLIKDSLPEKVESLLENTS--EEVDETVQRIIRSSNIYDAHQEKIPKRKNPEKPAWN-----------YP-----------RDYGLTDIRKSRNLTIKMLQLCETL-CGFNVAQQRQIIH-NGLVQVPLVKDGDLVEFSMKMDLLMTSMIPLTPMGSTADAA---DKTLPELYPLLSTAGLRRYHFYDLKLLYPIAQGSPWSTPHTIFIYHDCQRVKNLTEIPVEQDQLFARSLIEAFATTATYARQKYGDSVED-LPEPLAVQCVHVDGQNFHFSVFQLNTLNIEEKEGKMNYWWCSPQISLFEQAKYENARPVLEGYNPDVFKRLLAFY 410
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1028711457|ref|XP_008183902.2| (PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L37, mitochondrial [Acyrthosiphon pisum]) HSP 1 Score: 142.895 bits (359), Expect = 2.220e-34 Identity = 110/434 (25.35%), Postives = 199/434 (45.85%), Query Frame = 0 Query: 27 RWQLGRHQRIKNRDFARRIAERGIPVLTPEDVMHYPTLPPMP--TYEGVEWATEPSR-EPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVY-RDANTFPVVDSGHAAPNVHLGF-GFDPT-----FEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLYLQG 450 +W++ R + + + + + R IP++ + +H P E P + EP L+ HPL+ D+P H+ + G L+QAK T ++E + GLP+ + + P QDE IQ I + ++DA+Q LP R W K R++GIP R++ + +L+ C++ + ++ + +D L + + + + +L P P +D + + +PDL PL+ S+ ++Y +D P+ + NVH F ++ T +E E RSL + A+ A+ ++G +V LPEP++++ + TN F+ FQLN+LD +++G+KN++W P + KC +D+G+P L+ YNP+ F +L Y+ G Sbjct: 19 QWRVQRKKTLIETNAEKVLTSRSIPIIDAKQFLHEPLFEAQKQDVKEIFNNIVGPIKLEPKLNNT-HPLWNDDPCLVYGDHNVLVHG--LEQAKVFTNAIEPEPGLPK-YFKELYEAYRLPNQDEHIQRIIIASILYDAVQEKLPIRKDPKRPAW----------------------KFPRDYGIPDKRRNNLIVSRMLQLCESSVGNMSS--NKVIAKDVFLKCLCKEMHISLNLRADLLLLSDTSLP--PVMDDIQGD------LPDLSPLDYKISLDEINIYHKDEFISPITGKFN---NVHTAFIHYNETEVKNLYETPVLETQIMGRSLMKCYAFAVANAKSKYGENVKE-LPEPITLQCVQTNSQWFHFSIFQLNSLDGPEENGMKNIYWQTPLLNLYKKCVFDEGVPVLDDYNPEVFKNVLSFYMNG 412 The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 5
BLAST of 39s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold180_size281610:77826..79504- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold180_size281610-snap-gene-0.40 ID=maker-scaffold180_size281610-snap-gene-0.40|Name=39s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=1679bp|location=Sequence derived from alignment at scaffold180_size281610:77826..79504- (Tigriopus kingsejongensis)back to top Synonyms
The feature '39s ribosomal protein mitochondrial' has the following synonyms
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