39s ribosomal protein mitochondrial, maker-scaffold180_size281610-snap-gene-0.40 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Match: EMLSAG00000004153 (supercontig:LSalAtl2s:LSalAtl2s219:347626:350474:1 gene:EMLSAG00000004153 transcript:EMLSAT00000004153 description:"maker-LSalAtl2s219-augustus-gene-3.25") HSP 1 Score: 288.115 bits (736), Expect = 3.060e-93 Identity = 171/455 (37.58%), Postives = 248/455 (54.51%), Query Frame = 0 Query: 1 MRLTWVAWGRK---GINHWELLCHKHWNNRWQLGRHQRIKNRDFARRIAERGIPVLTPEDVMHYPTLPPMPTYEGVEWATEPS--REPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTFEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPR-HEFFTKCEYDQGLPTLEAYNPKTFTTLLGLYLQ 449 MRLT V + RK NH ++NN WQ GR + + D + + GIPV++P+DV+ + P YE E+ S RE + HPL++D PVHT + F +LD AK+LTK+VE+ GLP ++ +I + L ++ I+ET MFDA+Q LP VP IGW PV D+M PYP SWQ K AR++GIP R + NLTRGL R D + ++L R E L Q+F+RL + +P + P + P+ D+ +++ L +PD+ P+ +WP +VYR+ N P++D + + +P + NE +AA SL SF ALGQA + +GS+ + VLPEP++V FI T+G + +AFQLNTL+L+ + GVKN+FWHE + CEY QG P E+ N F LL +Y + Sbjct: 1 MRLTRVLFRRKLPVRRNH-----PINFNNAWQEGRTLPLTDTDDQKVLTSMGIPVVSPQDVIQSSYVMP---YEVPEYDPPKSIIRENLPKDESHPLWKDRPVHTFGDRTYFPVNHQLDLAKNLTKTVELDVGLPSRLIQSIEKTSLSEEALSSVEDMIKETQMFDAIQKKLPFNYKVPFIGWHPVNDRMSSKTPYPV-TMSWQYKEARKYGIPLPRSTLNLTRGLFRLLDQFCPEAKDILHRVNHEKQILRQYFNRLGSYTRVSVHLPFSVWSPHLIKPYADTNTTKSSISLKLPDIHPMEPQVGLWPINVYREENNLPIMDGSLLRAHTLVNNYTNPVPDLA-NEDQFAANSLMLSFASALGQAXLLYGSEFSDVLPEPITVHFINTDGKKFHISAFQLNTLELSTNDGVKNIFWHEKEMSSLYDVCEYVQGRPMFESLNSSLFKKLLAMYAE 445
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|288559136|sp|A4FUC0.1|RM37_BOVIN (RecName: Full=39S ribosomal protein L37, mitochondrial; Short=L37mt; Short=MRP-L37; Flags: Precursor) HSP 1 Score: 95.1301 bits (235), Expect = 5.247e-20 Identity = 92/378 (24.34%), Postives = 155/378 (41.01%), Query Frame = 0 Query: 88 KDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLA-AIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTF--EYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLE-----------AYNPKTFTTLLGLYLQGV 451 ++HPLY+DE + H + ++G + QA LTK+ ++ GLP+ VL+ A QDER+ I ++ + + +P+R + PV+ L++ C + + +P L R + N L+ + R + S + PL P EVEAT+ + P++ S+ H+Y D N G+ P H + + + F A+ + +F AL QAR+ +G+D VL +PV V+ + T+G F QLNT DL + G+KN+ W + + ++ LP ++ + P+TF L LYL G Sbjct: 94 QEHPLYKDEVCYIFHQRCRLLEG--VKQALWLTKTKLIE-GLPEKVLSLADNPRNHIENQDERVLNVISHARLWHSTE-DIPKRET-----YCPVI-----------------------------------VDSLIQLCKSQILKHPSLARRICAQKNMLSTTWKRESTLIQVHGSSGAQLNAKDPLPPIASREEVEATKNHVLETFSPISPTISLQECHIY-DVNDDTGFREGYPYPCPHTLYLLESANLRAHRFQPDQLRAKMILFAFGNALAQARLLYGND-PKVLEQPVVVQSVGTDGRVFQFLVLQLNTTDLASEEGIKNLVWVDSDQLLY---QHFWCLPVIKKKVVVEPVGPTGFQPETFRKFLALYLHGA 422
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|81884465|sp|Q6AXT0.1|RM37_RAT (RecName: Full=39S ribosomal protein L37, mitochondrial; Short=L37mt; Short=MRP-L37; Flags: Precursor) HSP 1 Score: 88.9669 bits (219), Expect = 5.281e-18 Identity = 99/425 (23.29%), Postives = 177/425 (41.65%), Query Frame = 0 Query: 58 VMHYPTLPPMPTYEG----VEWATEPSREPF----LDRKDH--------PLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQ-VELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTF---EYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEA-----------YNPKTFTTLLGLYLQGV 451 V P L P+ TYEG V W +P P+ +D + H PLY+++P + H + ++G + QA LTK+ ++ GLP+ VL+ + Q++R+ I + ++ + + +P+R + + PL + LL+ C + + +P L R ++ L ++R + + + +++ PL P EVEATR + P++ + HVY + G+ P+ H + + + + E++ A+ L +F AL QAR+ +G + A VL +P+ V+ + T+G F QLNT DL GVKN+ W + + ++ P ++ + P+TF L LYL G Sbjct: 49 VYEIPGLEPI-TYEGKKHFVPWLAKPIFPPWERGWIDPRFHRAAPIHEQPLYKEQPCYIFHQRCRLLEG--MKQALWLTKTKLIE-GLPKKVLSLVDDPTNHIENQEQRVLDIISHSRLWHSTE-DIPKR-------------ETYCPL---------------------------IVDNLLQLCKSQIIKHPSLARRTSAQNCSLATTWNRESLLLQVRGTSSTMLSAKDPLPPIASREEVEATRSHVLETFYPISPTIDLQECHVY-EVKEDTGFREGYPYPHPHTLYILEKANLRPQRFLPEQL-RAKMLLFAFANALAQARLLYG-NTARVLEQPIVVQSVGTDGRVFQFLVLQLNTTDLTSSEGVKNLVWTDSDQLLY---QHFWCRPVIKKKVVVEPVGPVDFQPETFKKFLALYLHGA 422
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|152083350|sp|Q9BZE1.2|RM37_HUMAN (RecName: Full=39S ribosomal protein L37, mitochondrial; Short=L37mt; Short=MRP-L37; AltName: Full=39S ribosomal protein L2, mitochondrial; Short=L2mt; Short=MRP-L2; AltName: Full=Mitochondrial large ribosomal subunit protein mL37; Flags: Precursor) HSP 1 Score: 83.9593 bits (206), Expect = 2.594e-16 Identity = 86/378 (22.75%), Postives = 158/378 (41.80%), Query Frame = 0 Query: 89 DHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAI--PQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTF--EYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEA-----------YNPKTFTTLLGLYLQGV 451 +HPLY+D+ + H + ++G + QA LTK+ ++ GLP+ VL+ + P+ + QDE + I ++ + +P+R + PV+ L++ C + + +P L R ++++ + ++R + + S ++ PL E+EAT+ + P++ + ++Y D G+ P H + D + A+ + +F AL QAR+ +G+D A VL +PV V+ + T+G F FQLNT DL+ + GVKN+ W + + ++ LP ++ + P+TF L LYL G Sbjct: 95 EHPLYKDQACYIFHHRCRLLEG--VKQALWLTKTKLIE-GLPEKVLSLVDDPRNHI-ENQDECVLNVISHARLWQTTE-EIPKRET-----YCPVI-----------------------------------VDNLIQLCKSQILKHPSLARRICVQNSTFSATWNRESLLLQVRGSGGARLSTKDPLPTIASREEIEATKNHVLETFYPISPIIDLHECNIY-DVKNDTGFQEGYPYPYPHTLYLLDKANLRPHRLQPDQLRAKMILFAFGSALAQARLLYGND-AKVLEQPVVVQSVGTDGRVFHFLVFQLNTTDLDCNEGVKNLAWVDSDQLLY---QHFWCLPVIKKRVVVEPVGPVGFKPETFRKFLALYLHGA 422
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|81879838|sp|Q921S7.1|RM37_MOUSE (RecName: Full=39S ribosomal protein L37, mitochondrial; Short=L37mt; Short=MRP-L37; Flags: Precursor) HSP 1 Score: 83.5741 bits (205), Expect = 3.981e-16 Identity = 101/425 (23.76%), Postives = 175/425 (41.18%), Query Frame = 0 Query: 58 VMHYPTLPPMPTYEG----VEWATEPSREPFLDRKDHP------------LYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQ-VELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVY--RDANTFPVVDSGHAAPNVHLGFGFDPTF---EYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEP-----RHEFFTKCEYDQGLPTLEA----YNPKTFTTLLGLYLQGV 451 V P L P+ TYEG V W P P+ + P LY++EP + H + ++G + QA LTK+ ++ GLP+ VL+ + Q++R+ I ++ + + +P+R + + PL + L++ C + + +P L R ++ L ++R + + + +++ PL EVEATR + P++ + HVY +D F G+ P+ H + + + + E++ A+ L +F AL QAR+ +G + A VL +P+ V+ + T+G F QLNT DL GVKN+ W + RH F+ + + + + P+TF L LYL GV Sbjct: 49 VYEIPGLEPI-TYEGKKHFVPWLARPIFPPWERGWNDPRFHRAAPIHEQTLYKEEPCYIFHQRCRLLEG--MKQALWLTKTKLIE-GLPKKVLSLVDDPANHIENQEQRVLDIISHARLWHSTE-DIPKR-------------ETYCPL---------------------------IVDSLIQLCKSQILKHPSLARRTSAQNCTLATTWNRESLLLQVRGTSSTILSAKDPLPVIASREEVEATRSHVLETFYPISPTIDLQECHVYEVKDDTGF---QEGYPYPHPHTLYFLEKANLRPQRFLPEQL-RAKMLLFAFANALAQARLLYG-NTAKVLEQPIVVQSVGTDGRVFQFLVLQLNTTDLASSEGVKNLVWTDSDQLLYRH-FWCRPVIKKKVVVEPVGPVDFQPETFRKFLALYLHGV 422
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|88932614|sp|Q5ZI69.2|RM37_CHICK (RecName: Full=39S ribosomal protein L37, mitochondrial; Short=L37mt; Short=MRP-L37; Flags: Precursor) HSP 1 Score: 82.0333 bits (201), Expect = 1.181e-15 Identity = 93/389 (23.91%), Postives = 158/389 (40.62%), Query Frame = 0 Query: 78 EPSREPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVL--AAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPTFEY--YFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLE-----------AYNPKTFTTLLGLYLQGV 451 EP P +D PL ++ H + ++G + QA+ LTK+ VQ GLP VL A P +L Q+E + + +++ +V PRR + PV L L+ C ++SV YP L R + + + + R + + IL+ P+ P E+ AT++ + P++ + +VY++ N D G+ + H + + + F A+ L +F AL +A++ +G+D VL +P+ V+ + T+G F FQLNT DL + G+KN+ W + + E Q +P ++ P+TF L LYL G Sbjct: 90 EPWHSPGPRYEDMPLRKERGCFICHQRVRMLEG--VRQAQWLTKTKLVQ-GLPAKVLSIAENPAYQL-QEQEEAVHRAVAHARLWETTEVS-PRREK-----YCPV-----------------------------------LFEDLIHLCRSMSVKYPSLARRMLARNYRIAATWERESTLLQIRGLNGILMNSMTPIPPVASKEEILATKDHVLETFYPISPTIDLQEVNVYQELNDTGFKD-GYPYSHPHTLYFLESANKRPNRFRPEQLRAKMLMFAFGNALAKAKVLYGND-PQVLEQPIVVQSVGTDGQLFQFLVFQLNTTDLVSNDGIKNLVWIDSDQNLY---ESAQCVPEVKKRVVTKPTGIYGLQPETFKKFLALYLHGT 428
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1339083618|ref|XP_023702863.1| (39S ribosomal protein L37, mitochondrial [Cryptotermes secundus] >gi|1339083620|ref|XP_023702864.1| 39S ribosomal protein L37, mitochondrial [Cryptotermes secundus] >gi|1339083622|ref|XP_023702865.1| 39S ribosomal protein L37, mitochondrial [Cryptotermes secundus] >gi|1330923619|gb|PNF38453.1| hypothetical protein B7P43_G04033 [Cryptotermes secundus] >gi|1330923620|gb|PNF38454.1| hypothetical protein B7P43_G04033 [Cryptotermes secundus] >gi|1330923621|gb|PNF38455.1| hypothetical protein B7P43_G04033 [Cryptotermes secundus]) HSP 1 Score: 186.808 bits (473), Expect = 1.100e-50 Identity = 137/458 (29.91%), Postives = 215/458 (46.94%), Query Frame = 0 Query: 1 MRLTWVAWGRKGINHWELLCHKHWNNRWQLGRHQRIKNRDFARRIAERGIPVLTPEDVMHYPTLPPMPTYEGVEWATEPSREPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCD-ALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLG-FGFDPT-----FEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLYLQGV 451 MRLT V + H E + KHW +L + + + + RGIP+ P D++ + VE R P HP Y + H H+ ++G LDQAK LTK+VE++ GLP + + + P QD +Q I + +FDA+QV LP+ + RP +W R +GI R++ L+ LL+ CD A + RA+++D + + + F+L++ L+ PL + ++ EVE T+ + +PDL P+ ++ ++Y+ N FPV+ G P +H ++ T +E + E R+L SF +A A+ RFG +V LPEP++++ + T+G F FQLNTLDLN G KN+FW PR F+ C Y +G P +E YNP+ F L G+ Sbjct: 1 MRLTAVLCKQ----HIERMFKKHW----RLQKTRVPYPTEAESEMEARGIPIYEPNDIIE-----ERREFVKVEVKRHEPR-PIPRDHTHPFYHERICHMYRDHNVLLKG--LDQAKILTKTVEIKTGLPVEIENLVGS-QCLPDQDALVQRCIMKAHVFDAMQVKLPK------------IHDPQRP--------AWN--FPRVYGITDKRRNDLLSSKLLQLCDFACENSADAVSSRALVQDETVFVPLEKDGDLIQFELTVNFLLNSGIPLPIYANAEEVEGTKVIPLPDLYPIKHTVTLERENIYQTKNIFPVL-QGSQFPYIHTAVIHYNETEVKNIYETHVTEEQILGRTLLKSFAIAAAYAQQRFGVNVKD-LPEPITIQCVQTDGRLFHFAVFQLNTLDLNGIDGKKNIFWMLPRIPLFSSCMYVKGKPCVEGYNPEVFCRFLAFCSNGL 417
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1228020327|ref|XP_021942026.1| (39S ribosomal protein L37, mitochondrial isoform X1 [Zootermopsis nevadensis] >gi|1228020329|ref|XP_021942027.1| 39S ribosomal protein L37, mitochondrial isoform X1 [Zootermopsis nevadensis] >gi|1228020331|ref|XP_021942028.1| 39S ribosomal protein L37, mitochondrial isoform X1 [Zootermopsis nevadensis]) HSP 1 Score: 186.422 bits (472), Expect = 1.676e-50 Identity = 135/452 (29.87%), Postives = 216/452 (47.79%), Query Frame = 0 Query: 18 LLCHKHWNNRWQLGRHQRIKNRDF------ARRIAERGIPVLTPEDVMHYPTLPPMPTYEGVEWATEPSREPFLDRK-----DHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCD-ALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLG-FGFDPT-----FEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLYLQGV 451 +LC +H ++ H RI+++ I RGIPV P D++ E + + +P + + HPLY + H H+ ++G LDQ K LTK+VE++ GLP + + V P QD +Q I ++ +FDA+QV LP+ + RP +W R +GI R++ L+ L++ C+ A +L RAV++D + F + + +L++ ++ PL + D+ EV+ T+++ +PDL P+ ++ ++Y+ N FPV+ G P +H F + T +E E R+L SF +A A+ RFG +V LPEP++V+ + T+G F FQLNTLDL+ G KN+FW PR FT C Y +G P LE YN + F+ LL G+ Sbjct: 6 VLCKQHIGRMFKY--HWRIQSKRIPVDTKAESEIQARGIPVYEPNDIIE----------EHRQLVQVTTAKPLVPKPIPRDLTHPLYHERICHMYRDHNVLLKG--LDQGKILTKTVEIKTGLPVEI-ENLLGVHCLPDQDILVQRCILKSHVFDAMQVKLPK------------IRDPQRP--------AWN--FPRGYGITDKRRTNLLSPKLIQLCEFACGNSTDAVLGRAVVQDETVFVPFEKDGDLIQLELTVNFMLNSAAPLPLYADADEVQGTQDIPLPDLYPIKHTITLEKENIYQIRNVFPVL-KGSKFPYIHTAIFHCNETEVKNIYETPVTEEQVQGRTLLKSFAVAAAHAQQRFGVNVKD-LPEPITVQCVQTDGRLFHFAVFQLNTLDLDGTEGKKNIFWMLPRIPLFTSCMYVKGRPLLEGYNSEVFSRLLAFCSNGL 418
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1228020333|ref|XP_021942029.1| (39S ribosomal protein L37, mitochondrial isoform X2 [Zootermopsis nevadensis]) HSP 1 Score: 179.489 bits (454), Expect = 2.516e-48 Identity = 122/389 (31.36%), Postives = 193/389 (49.61%), Query Frame = 0 Query: 75 WATEPSREPFLDRK-----DHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCD-ALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLG-FGFDPT-----FEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLYLQGV 451 WA + +P + + HPLY + H H+ ++G LDQ K LTK+VE++ GLP + + V P QD +Q I ++ +FDA+QV LP+ + RP +W R +GI R++ L+ L++ C+ A +L RAV++D + F + + +L++ ++ PL + D+ EV+ T+++ +PDL P+ ++ ++Y+ N FPV+ G P +H F + T +E E R+L SF +A A+ RFG +V LPEP++V+ + T+G F FQLNTLDL+ G KN+FW PR FT C Y +G P LE YN + F+ LL G+ Sbjct: 11 WAEVTTAKPLVPKPIPRDLTHPLYHERICHMYRDHNVLLKG--LDQGKILTKTVEIKTGLPVEI-ENLLGVHCLPDQDILVQRCILKSHVFDAMQVKLPK------------IRDPQRP--------AWN--FPRGYGITDKRRTNLLSPKLIQLCEFACGNSTDAVLGRAVVQDETVFVPFEKDGDLIQLELTVNFMLNSAAPLPLYADADEVQGTQDIPLPDLYPIKHTITLEKENIYQIRNVFPVL-KGSKFPYIHTAIFHCNETEVKNIYETPVTEEQVQGRTLLKSFAVAAAHAQQRFGVNVKD-LPEPITVQCVQTDGRLFHFAVFQLNTLDLDGTEGKKNIFWMLPRIPLFTSCMYVKGRPLLEGYNSEVFSRLLAFCSNGL 372
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|646634633|gb|KDQ71517.1| (39S ribosomal protein L37, mitochondrial [Zootermopsis nevadensis]) HSP 1 Score: 180.644 bits (457), Expect = 3.462e-48 Identity = 135/463 (29.16%), Postives = 216/463 (46.65%), Query Frame = 0 Query: 18 LLCHKHWNNRWQLGRHQRIKNRDF------ARRIAERGIPVLTPEDVMHYPTLPPMPTYEGVEWATEPSREPFLDRK-----DHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFN-----------LTRGLLRYCD-ALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLG-FGFDPT-----FEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLYLQGV 451 +LC +H ++ H RI+++ I RGIPV P D++ E + + +P + + HPLY + H H+ ++G LDQ K LTK+VE++ GLP + + V P QD +Q I ++ +FDA+QV LP+ + RP +W R +GI R++ L+ L++ C+ A +L RAV++D + F + + +L++ ++ PL + D+ EV+ T+++ +PDL P+ ++ ++Y+ N FPV+ G P +H F + T +E E R+L SF +A A+ RFG +V LPEP++V+ + T+G F FQLNTLDL+ G KN+FW PR FT C Y +G P LE YN + F+ LL G+ Sbjct: 6 VLCKQHIGRMFKY--HWRIQSKRIPVDTKAESEIQARGIPVYEPNDIIE----------EHRQLVQVTTAKPLVPKPIPRDLTHPLYHERICHMYRDHNVLLKG--LDQGKILTKTVEIKTGLPVEI-ENLLGVHCLPDQDILVQRCILKSHVFDAMQVKLPK------------IRDPQRP--------AWN--FPRGYGITDKRRTITCVALPYLIYNLLSPKLIQLCEFACGNSTDAVLGRAVVQDETVFVPFEKDGDLIQLELTVNFMLNSAAPLPLYADADEVQGTQDIPLPDLYPIKHTITLEKENIYQIRNVFPVL-KGSKFPYIHTAIFHCNETEVKNIYETPVTEEQVQGRTLLKSFAVAAAHAQQRFGVNVKD-LPEPITVQCVQTDGRLFHFAVFQLNTLDLDGTEGKKNIFWMLPRIPLFTSCMYVKGRPLLEGYNSEVFSRLLAFCSNGL 429
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1325314302|ref|XP_023338824.1| (uncharacterized protein LOC111709401 [Eurytemora affinis]) HSP 1 Score: 161.77 bits (408), Expect = 4.540e-42 Identity = 101/303 (33.33%), Postives = 155/303 (51.16%), Query Frame = 0 Query: 149 RIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVL-FKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGFDPT-FEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPR-HEFFTKCEYDQGLPTLEAYNPKTFTTLLGLYL 448 ++++ I+ + DA QV LP+ VP IGW V M Y +SW R + RE+GIP RK NL RGL + + D+ LE N + QF R D +++ F L +P +IT +P L+S +++ ++ +PD+ PLN A + +VY N FPV+ S P +H F + F A+ L ++ A+GQAR+ +GSD++G L P+++ I TNG + T FQLN+LDLN S N+F + P + F C Y++G N TF+ L + + Sbjct: 30 KVESLIQSCWTGDATQVLLPKNFKVPFIGWHAVESTMKPRNQYDWKAFSWGRNMPREYGIPNQRKIMNLNRGLFKQMG--NQHNIRFQDQHFLEGNKIRQFIRRPDGKLVRFFLDVPFIITSSKP----LESIDLDISQCSGIPDVAPLNPVAGLQEENVYELKNNFPVLSSQFIHPYIHTVFRHNSGHIAPKFLPDKEKAKCLIQAYAAAIGQARLLYGSDISGDLRTPITINSISTNGSKYMVTKFQLNSLDLN--SSKPNIFTYNPDILDLFEFCGYEEGRVAFSGLNTDTFSLLEAMMI 324
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|936593925|ref|XP_014210280.1| (39S ribosomal protein L37, mitochondrial isoform X1 [Copidosoma floridanum]) HSP 1 Score: 161.384 bits (407), Expect = 3.604e-41 Identity = 127/413 (30.75%), Postives = 204/413 (49.39%), Query Frame = 0 Query: 43 RRIAERGIPVLTPEDVMHYPTLPPMPTYEGVEWATEPSREPFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERI-QTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQF-FSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFGF-DPT-----FEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLY 447 + +A +GI VL PEDV+ P P ++ R P D K+HP + D P T + G L QA+ +TK+V + LP+AV + I E P + + Q TI+ + +FDA Q LP+ V P+ P +++ R + GI +RK NL++ L++ C+ ++ PE+ + + DN L F F R F L++ +++ +PL P E E + +P+L PL+C + ++Y+ N P+V SG+ ++H + DP+ E E R+L +F A AR RFG DV LPEP++V+ I+++G F+ +QLNTLD+ +G+KN +W P+ + + Y +G P LE YNP+ T+L Y Sbjct: 35 KTLAAKGIQVLDPEDVLKKPH--GKPKFDFTSLNLLEKRPPTRD-KNHPDWHDRPCLTYKDNDLLTLG--LPQAQDITKTVVFENQLPEAVESLI---EDIPEEYHNLAQKTIKTSVIFDAHQELLPK-VKDPN-----------------RPAFNFPRLM----GITDVRKISNLSKKLIQLCEC--INGPEVSETRSMLDNVLLSFPFEREFDLHQFVLTMDMMLMCEKPLTPSGHFNE-EVINSMEIPNLHPLHCSIGLDEENIYKLNNFHPLV-SGYHKSHIHTIIAYYDPSKVKHKSELSSTESQTLGRALLKAFTAAASSARQRFGLDVKE-LPEPITVQCIHSDGKWFYFSVYQLNTLDIEGKNGIKNYYWMLPKLDLYKVGGYVRGTPVLEGYNPEVLKTMLAFY 412
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|998517239|ref|XP_015519436.1| (PREDICTED: 39S ribosomal protein L37, mitochondrial [Neodiprion lecontei]) HSP 1 Score: 160.614 bits (405), Expect = 5.671e-41 Identity = 113/372 (30.38%), Postives = 189/372 (50.81%), Query Frame = 0 Query: 83 PFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPEL-LDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGFG-FDP-----TFEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLY 447 P K HP ++D+P + H+ ++G E QAK LTK+VE+ GLP++V I E R +E + T+ + ++DA Q LP+ G+ MF P PY GI +RK+ NL++ LL+ C++LS P++ +R ++ + ++ + ++++ F+L +L+T PL P E ++ +P+L P++ ++ ++Y N +P++ + NVH F F+P +E E RSL SF + AR RFG++V L EPV+V+ I ++G F+ QLNTLDLN G +N++W P + K Y+ G+PT++ YNP+ F + Y Sbjct: 69 PLPKDKTHPNWKDKPCLSYRDHNVLLEGVE--QAKVLTKTVEIVDGLPESVNNLI--TEHDERVEELVLRTVYNSTIYDAYQERLPKPKDPERPGF------MF-PRPY---------------GISAIRKARNLSQKLLQLCESLS--GPQVAFERNLIYNGVVSLPIEKDEKQLQFELRADMLVTSTSPLKPMASKGE---GNDIQLPNLHPIDSTITLEKENIYTLRNFYPIMKNSQWM-NVHTIFAHFNPREVKNIYETPVTESQILGRSLLKSFAVGAACARQRFGNEVLS-LSEPVTVQCIQSDGKMFHFSVLQLNTLDLNGSGGERNIWWSAPNINLYEKAGYEGGIPTVQNYNPEVFRRIFAFY 407
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|665792137|ref|XP_008543658.1| (PREDICTED: 39S ribosomal protein L37, mitochondrial [Microplitis demolitor]) HSP 1 Score: 156.377 bits (394), Expect = 2.089e-39 Identity = 116/439 (26.42%), Postives = 196/439 (44.65%), Query Frame = 0 Query: 27 RWQLGRHQRIKNRDFARRIAERGIPVLTPEDVMHYPTLPPMPTYEGVEWATEPSREPFLDR----------KDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRV--AVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQF-FSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSG-----HAAPNVHLGFGFDPTFEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLY 447 W Q + + + GIPV PE++++ P T+ F DR + HP +++ P L+ + + G+E QA+ LTK++ V+ GLP + +I ++ ++ + + +FDA Q LP+R+ A P G R++G+ +RKS NL + +L C+ L P ++ L NG+ Q + + V+F +++ ++IT + L P E ++L +P++ PLN H+Y + +PV S H H E + ARSL SF A A +FG+++ LPEP++V+ + +NG F+ FQLNTL+++ GVKN++W P + F K EY++G P +E YNP+ F + Y Sbjct: 19 NWFFHTKQILAESGSESTLTKMGIPVFDPEEILNPP-------------KTKIDVTQFFDRVVYPRPIPIDETHPSWKERPCFKLNTNDLLVMGTE--QAQVLTKTLLVKDGLPDKIEESIKDTS--DEVNKIVERFVYASNIFDAHQEKLPKRIDPARPAFGS------------------------PRDYGLTDVRKSRNLLQKMLHLCELLC--GPSVVSDRQLVHNGITQIPLEKDNDLVMFNMTVDMMITANKSLTPV---GSFENVKDLTLPNIYPLNPIIYFPEEHIYEQEHLYPVPTSSPWVNPHTIFIYHDQVKVQNITELPVTKNQLLARSLIKSFTAAASCAYQKFGTNIKD-LPEPITVQCVQSNGQSFHFSVFQLNTLNISGTEGVKNLWWSMPEIDLFKKAEYEEGKPIVEGYNPEVFKRISAFY 410
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|218083864|ref|NP_001136159.1| (mitochondrial ribosomal protein L37 [Nasonia vitripennis]) HSP 1 Score: 154.836 bits (390), Expect = 9.603e-39 Identity = 106/373 (28.42%), Postives = 181/373 (48.53%), Query Frame = 0 Query: 83 PFLDRKDHPLYQDEPVHTLHCHSKFIQGSELDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLD-RAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRE-LAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGF-GFDPT-----FEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLY 447 P ++HP + D P H +QG L QA+ +TK+V + LP V A Q+ L D +Q I + +FDA Q LP+ W R+ GI RK NL++ L++ CD LS P++ R+++E+ L F + +++F L++ +++ +PL P + +V+ + + +P L P+ M ++Y+ N +P++ SG+ N+H F +D T E E R++ +F A AR ++G+DV LPEP++V+ I ++G + F+ +QLNTLD++ ++G+KN W P+ + Y+ G P +E YNP+ F +L Y Sbjct: 71 PIPKDQNHPDWHDRPCLVYEDHELLVQG--LAQAQQITKTVVFENVLPANVEALTEQLNLPQETDTLVQRIIENSVIFDAHQELLPKLKDPSRPAWN----------------------FPRQMGITDQRKISNLSKKLIQLCDCLSG--PQVASTRSIIENALLCYPFEKEFDQLMFTLTMDVVLMSEKPLKP---AGQVKKDHDSMTLPILYPMTPTVGMRKQNIYKLQNLYPLI-SGYHQKNIHTVFIYYDKTSVKNITELETEETQVFGRAMMKAFTAAASTARQKYGTDVKE-LPEPITVQCIQSDGKQFYFSVYQLNTLDIDGENGMKNYCWTLPKLNLYNVGGYENGKPVVEGYNPEVFRRILAFY 412
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1061135338|ref|XP_017891628.1| (PREDICTED: 39S ribosomal protein L37, mitochondrial [Ceratina calcarata] >gi|1061135341|ref|XP_017891629.1| PREDICTED: 39S ribosomal protein L37, mitochondrial [Ceratina calcarata]) HSP 1 Score: 154.066 bits (388), Expect = 1.565e-38 Identity = 109/341 (31.96%), Postives = 166/341 (48.68%), Query Frame = 0 Query: 113 LDQAKSLTKSVEVQAGLPQAVLAAIPQVELFPRQDERIQTTIRETFMFDALQVPLPRRVAVPHIGWTPVVDQMFRPLPYPEPKYSWQRKLAREFGIPTMRKSFNLTRGLLRYCDALSVDYPELLDRAVLEDNGLNQFFSRLDRRVLFKLSIPILITDPRPLAPFLDSAEVEATRELAVPDLDPLNCFASMWPNHVYRDANTFPVVDSGHAAPNVHLGF-GFDPT-----FEYYFNERVYAARSLTSSFLLALGQARMRFGSDVAGVLPEPVSVKFIYTNGFRMSFTAFQLNTLDLNDDSGVKNVFWHEPRHEFFTKCEYDQGLPTLEAYNPKTFTTLLGLY 447 + QA LTK+V+V+ LP+ V I V D ++ +R + ++D QV LP+ W YP R FG+ + RK NL + LL+ C++LS +R ++ D L+ F + +R + F + I++T PLAP A+V EL +P++ PL+ A + + +Y + +P+ + NVH F +DP+ E E ARSLT SF A AR RFG DV LPEPV V+ I ++G F+ +QLNTLD++ + G++N +W EP + + Y +G P L+ YN F LL Y Sbjct: 93 VQQASLLTKTVQVEDKLPKKVTDLITDVPC--NIDTLVERFVRSSVIYDPEQVKLPKIKDPERPSWV-----------YP-----------RVFGLSSTRKVHNLFKKLLQLCESLS-GLSIAQNRFIVSDGLLSTFIEKENRFLNFSTKMDIMMTSMMPLAPI---ADVNIHNELKMPNIYPLHSTAGLTKSEIYDSTDLYPI-NKESPLMNVHTIFVNYDPSKVKNLTELPVTENQIHARSLTQSFTTAATYARQRFGKDVKA-LPEPVVVQCIQSDGQNFYFSVYQLNTLDIDGEEGIRNFWWAEPTIKLYEFAGYKEGQPYLDGYNSDVFKRLLAFY 403 The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 5
BLAST of 39s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold180_size281610:77826..79504- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold180_size281610-snap-gene-0.40 ID=maker-scaffold180_size281610-snap-gene-0.40|Name=39s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=1679bp|location=Sequence derived from alignment at scaffold180_size281610:77826..79504- (Tigriopus kingsejongensis)back to top Synonyms
The feature '39s ribosomal protein mitochondrial' has the following synonyms
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