BLAST of retinoid x receptor vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19")

HSP 1 Score: 72.4034 bits (176), Expect = 4.917e-14
Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 0

Query:   68 CSICGDRASGKH--YGVYSCEGCKGFFKRTVR----KELVYACRENKACIIDKRQRNRCQYCRYMKCLATGMRREAVQEERNRGGHKGA 150
            C ICG+ A GKH  YG   C  C+ FF+R+V+    K+ +  C + K CII+ + R  CQ CR+ KC++ GMR   V  +R R   K A
Sbjct:  107 CQICGEVA-GKHVYYGGQCCTSCRAFFRRSVQNNSYKQFI-CCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSKKSA 193          

BLAST of retinoid x receptor vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3")

HSP 1 Score: 72.0182 bits (175), Expect = 6.069e-14
Identity = 31/72 (43.06%), Postives = 39/72 (54.17%), Query Frame = 0

Query:   68 CSICGDRASGK-HYGVYSCEGCKGFFKRTVRKELVYACRENKACIIDKRQRNRCQYCRYMKCLATGMRREAV 138
            C IC D A+   HYG  +C  C+ FF+R V     Y C  +K C I K  R  CQ+CR+ KCL  GM+   V
Sbjct:   63 CHICSDTANDHIHYGAIACXSCRAFFRRAVICNAEYHCSRDKTCFITKETRKHCQFCRFNKCLEAGMKNTWV 134          

BLAST of retinoid x receptor vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22")

HSP 1 Score: 66.2402 bits (160), Expect = 4.708e-12
Identity = 34/88 (38.64%), Postives = 48/88 (54.55%), Query Frame = 0

Query:   68 CSICGDRASGKH--YGVYSCEGCKGFFKRTVRK---ELVYACRENKACIIDKRQRNRCQYCRYMKCLATGMRREAVQEERNRGGHKGA 150
            C ICG+ A GKH  YG   C  C+ FF+R+V+    +    C + + CII+ + R  CQ CR+ KC++ GMR   V  +  R   K A
Sbjct:  106 CQICGEVA-GKHVYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERRSKKSA 192          

BLAST of retinoid x receptor vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5")

HSP 1 Score: 62.3882 bits (150), Expect = 9.533e-11
Identity = 34/85 (40.00%), Postives = 42/85 (49.41%), Query Frame = 0

Query:   68 CSICGDRAS-GKHYGVYSCEGCKGFFKRTVRK--ELVYAC-----RENKACIIDKRQRNRCQYCRYMKCLATGMRREAVQEERNR 144
            C ICGD A    HYG  +C  C+ FF RTV K  +  + C      E+  C+I K  R  CQ+CRY  CL+ GM    V     R
Sbjct:  137 CRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTTAEER 221          

BLAST of retinoid x receptor vs. L. salmonis genes
Match: EMLSAG00000007233 (supercontig:LSalAtl2s:LSalAtl2s405:178614:197434:1 gene:EMLSAG00000007233 transcript:EMLSAT00000007233 description:"maker-LSalAtl2s405-snap-gene-2.21")

HSP 1 Score: 53.5286 bits (127), Expect = 4.188e-8
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0

Query:   99 ELVYACRENKA-CIIDKRQRNRCQYCRYMKCLATGMRREAVQEER 142
            +L+Y C+     C+IDK  RN+CQ CR  KCL  GM ++AVQ ER
Sbjct:   60 KLIYRCQAGTGMCVIDKAHRNQCQACRLRKCLHMGMNKDAVQNER 104          

HSP 2 Score: 50.8322 bits (120), Expect = 3.352e-7
Identity = 43/155 (27.74%), Postives = 76/155 (49.03%), Query Frame = 0

Query:  236 IKLIRAGWNELLIAGCAFRSMNQEDGILWADSQFIKRENAHLAGVGDIFDRVLVELVGKMKEMKMDKAELGCLRAIILFNPDAKGLEQDPALQVESFREKVYATLEEYCRTN--------HENEPSRFAKLLLRLPALRSIGLKCVEHLFFYKLI 382
            + L+   W+EL +      SM  E   L++    +     + + + +  D VL  ++G+ K   ++ AE  C++AI+LF P+ +GL +D AL VE+ +++    L  +  T          +   SRF +LLL L  LR      +E L+F ++I
Sbjct:  240 VTLLEESWSELFLLCAIQWSMPLEKPSLFS----LPNPELYPSEIVNYVD-VLTGILGRYKRTAVNPAEFACMKAILLFKPETQGL-KDHAL-VENLQDQALVMLNNHVETTLPGGGGGRGQLSSSRFGRLLLLLSNLRQSNSFKIEKLYFDRII 387          

BLAST of retinoid x receptor vs. SwissProt
Match: gi|1350911|sp|P28702.2|RXRB_HUMAN (RecName: Full=Retinoic acid receptor RXR-beta; AltName: Full=Nuclear receptor subfamily 2 group B member 2; AltName: Full=Retinoid X receptor beta)

HSP 1 Score: 371.703 bits (953), Expect = 9.214e-124
Identity = 193/326 (59.20%), Postives = 230/326 (70.55%), Query Frame = 0

Query:   65 KHFCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELVYACRENKACIIDKRQRNRCQYCRYMKCLATGMRREAVQEERNRGGHKGAEAAEPVESSTGAGGLGGEMAIDRIVAAEHISEQGGAFSRQESDDLQAHMPGGFDGDQPNKR------KMLQQLVEWAKHIPHFTDLKIEDRIKLIRAGWNELLIAGCAFRSMNQEDGILWADSQFIKRENAHLAGVGDIFDRVLVELVGKMKEMKMDKAELGCLRAIILFNPDAKGLEQDPALQVESFREKVYATLEEYCRTNHENEPSRFAKLLLRLPALRSIGLKCVEHLFFYKLIKD 384
            K  C+ICGDR+SGKHYGVYSCEGCKGFFKRT+RK+L Y+CR+NK C +DKRQRNRCQYCRY KCLATGM+REAVQEER RG  K  +      +         EM +DRI+ AE   EQ    S Q  +        G   + P         K L  LVEWAK IPHF+ L ++D++ L+RAGWNELLIA  + RS++  DGIL A    + R +AH AGVG IFDRVL ELV KM++M+MDK ELGCLRAIILFNPDAKGL  +P+ +VE  REKVYA+LE YC+  +  +  RFAKLLLRLPALRSIGLKC+EHLFF+KLI D
Sbjct:  202 KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPE-------EMPVDRILEAELAVEQK---SDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLS-NPS-EVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGD 515          

BLAST of retinoid x receptor vs. SwissProt
Match: gi|1710720|sp|P49743.1|RXRB_RAT (RecName: Full=Retinoic acid receptor RXR-beta; AltName: Full=Nuclear receptor coregulator 1; AltName: Full=Nuclear receptor subfamily 2 group B member 2; AltName: Full=Retinoid X receptor beta)

HSP 1 Score: 367.081 bits (941), Expect = 6.201e-123
Identity = 195/326 (59.82%), Postives = 231/326 (70.86%), Query Frame = 0

Query:   65 KHFCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELVYACRENKACIIDKRQRNRCQYCRYMKCLATGMRREAVQEERNRGGHKGAEAAEPVESSTGAGGLGGEMAIDRIVAAEHISEQGGAFSRQESDDLQAHMPGGFDGDQPNKR------KMLQQLVEWAKHIPHFTDLKIEDRIKLIRAGWNELLIAGCAFRSMNQEDGILWADSQFIKRENAHLAGVGDIFDRVLVELVGKMKEMKMDKAELGCLRAIILFNPDAKGLEQDPALQVESFREKVYATLEEYCRTNHENEPSRFAKLLLRLPALRSIGLKCVEHLFFYKLIKD 384
            K  C+ICGDR+SGKHYGVYSCEGCKGFFKRT+RK+L Y+CR+NK C +DKRQRNRCQYCRY KCLATGM+REAVQEER RG  K  +      +         EM +DRI+ AE   EQ    S Q  +   A   GG   + P         K L  LVEWAK IPHF+ L ++D++ L+RAGWNELLIA  + RS++  DGIL A    + R +AH AGVG IFDRVL ELV KM++M+MDK ELGCLRAIILFNPDAKGL  +P  +VE  REKVYA+LE YC+  +  +  RFAKLLLRLPALRSIGLKC+EHLFF+KLI D
Sbjct:  127 KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGDGAGGAPE-------EMPVDRILEAELAVEQK---SDQGVEGPGATGGGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLS-NPG-EVEILREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGD 440          

BLAST of retinoid x receptor vs. SwissProt
Match: gi|1350912|sp|P28704.2|RXRB_MOUSE (RecName: Full=Retinoic acid receptor RXR-beta; AltName: Full=MHC class I regulatory element-binding protein H-2RIIBP; AltName: Full=Nuclear receptor subfamily 2 group B member 2; AltName: Full=Retinoid X receptor beta)

HSP 1 Score: 365.925 bits (938), Expect = 9.350e-122
Identity = 195/326 (59.82%), Postives = 231/326 (70.86%), Query Frame = 0

Query:   65 KHFCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELVYACRENKACIIDKRQRNRCQYCRYMKCLATGMRREAVQEERNRGGHKGAEAAEPVESSTGAGGLGGEMAIDRIVAAEHISEQGGAFSRQESDDLQAHMPGGFDGDQPNKR------KMLQQLVEWAKHIPHFTDLKIEDRIKLIRAGWNELLIAGCAFRSMNQEDGILWADSQFIKRENAHLAGVGDIFDRVLVELVGKMKEMKMDKAELGCLRAIILFNPDAKGLEQDPALQVESFREKVYATLEEYCRTNHENEPSRFAKLLLRLPALRSIGLKCVEHLFFYKLIKD 384
            K  C+ICGDR+SGKHYGVYSCEGCKGFFKRT+RK+L Y+CR+NK C +DKRQRNRCQYCRY KCLATGM+REAVQEER RG  K  +      +         EM +DRI+ AE   EQ    S Q  +   A   GG   + P         K L  LVEWAK IPHF+ L ++D++ L+RAGWNELLIA  + RS++  DGIL A    + R +AH AGVG IFDRVL ELV KM++M+MDK ELGCLRAIILFNPDAKGL  +P  +VE  REKVYA+LE YC+  +  +  RFAKLLLRLPALRSIGLKC+EHLFF+KLI D
Sbjct:  189 KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGDGAGGAPE-------EMPVDRILEAELAVEQK---SDQGVEGPGATGGGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLS-NPG-EVEILREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGD 502          

BLAST of retinoid x receptor vs. SwissProt
Match: gi|52783418|sp|Q90417.1|RXRBB_DANRE (RecName: Full=Retinoic acid receptor RXR-beta-B; AltName: Full=Nuclear receptor subfamily 2 group B member 2-B; AltName: Full=Retinoic acid receptor RXR-delta; AltName: Full=Retinoid X receptor beta-B; AltName: Full=Retinoid X receptor delta)

HSP 1 Score: 361.688 bits (927), Expect = 2.562e-121
Identity = 198/401 (49.38%), Postives = 253/401 (63.09%), Query Frame = 0

Query:    6 AHSLMEGGVPPTPPLAGLAHPPQSPLELKPDVSLLLNAHSPALPRPTSPAVHYPPLSGS------KHFCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELVYACRENKACIIDKRQRNRCQYCRYMKCLATGMRREAVQEERNRGGHKGAEAAEPVESSTGAGGLGGEMAIDRIVAAEHISEQGGAFSRQESDDLQAHMPGGFDGDQPN----KRKMLQQLVEWAKHIPHFTDLKIEDRIKLIRAGWNELLIAGCAFRSMNQEDGILWAD--------------SQFIKRENAHLAGVGDIFDRVLVELVGKMKEMKMDKAELGCLRAIILFNPDAKGLEQDPALQVESFREKVYATLEEYCRTNHENEPSRFAKLLLRLPALRSIGLKCVEHLFFYKLI 382
            + S+   GVP TP    + + P S  ++   +S+    H+ +      P      +SGS      K  C+ICGDR+SGKHYGVYSCEGCKGFFKRTVRK+L Y CR+NK C++DKRQRNRCQYCRY KCLA GM+REAVQEER +   +  +     E S+ A     EM +++I+ AE   E           DL +   G  +    N      K L  LVEWAK +PHF+D+ ++D++ L+RAGWNELLIA  + RS++ +D IL A                 F  RE++H A VG +FDRVL ELV KM++M+MDK ELGCLRAI+LFNPDAKGL      +VE  REKVYA+LE YC+  + ++  RFAKLLLRLPALRSIGLKC+EHLFF+KLI
Sbjct:   26 SSSIGSPGVPGTP---SIGYGPISNSQINSSMSVS-RLHAVSSSDDVKPPFGLKSVSGSGPMLSQKRMCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKECLVDKRQRNRCQYCRYQKCLAMGMKREAVQEERQKNKERDGD----YECSSSA---NEEMPVEKILEAETAVEH--------RTDLHSDATGSPNDPVTNICQAADKQLFTLVEWAKRVPHFSDVPLDDQVILLRAGWNELLIAAFSHRSISVKDEILLATGLHVPKESTHNLGVEAFFDRESSHSAEVGALFDRVLTELVCKMRDMQMDKTELGCLRAIVLFNPDAKGLTSSS--EVELLREKVYASLESYCKQKYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLI 405          

BLAST of retinoid x receptor vs. SwissProt
Match: gi|18202151|sp|O76202.1|USP_CHOFU (RecName: Full=Protein ultraspiracle homolog; AltName: Full=Nuclear receptor subfamily 2 group B member 4)

HSP 1 Score: 338.191 bits (866), Expect = 1.690e-111
Identity = 189/393 (48.09%), Postives = 240/393 (61.07%), Query Frame = 0

Query:   27 PQSPLELKPDVSLLLNAHSPALPRPTSPAVHYPP---LSGSKHFCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELVYACRENKACIIDKRQRNRCQYCRYMKCLATGMRREAVQEERNRGGHKGAEAAEPVESSTGAGGLGGEMAIDRIVAAEHISEQGGAFSRQESDDLQAHMPGGFDGDQPNKR-----------KMLQQLVEWAKHIPHFTDLKIEDRIKLIRAGWNELLIAGCAFRSM-----NQEDG-----------ILWADSQFIKRENAHLAGVGDIFDRVLVELVGKMKEMKMDKAELGCLRAIILFNPDAKGLEQDPALQVESFREKVYATLEEYCRTNHENEPSRFAKLLLRLPALRSIGLKCVEHLFFYKLIKDDGPNG 389
            P SP E+KPD ++L      A   P     +YPP   LSGSKH CSICGDRASGKHYGVYSCEGCKGFFKRTVRK+L YACRE + CIIDKRQRNRCQYCRY KCLA GM+REAVQEER R   +GAE A P  S      +  E++I+R+   E +           S++ Q    G      P  R           K +  LV WA+ IPHF  L+++D++ LI+A WNELL+   A+RSM      +E+G           +       + R +A  AGVG IFDRVL EL  KM+ ++MD+AE   L+AI+L NPD KGL+     +V+  REK+++ L++YCR +  NE  RFA LLLRLPALRSI LK  EHL+F+ L+ +   +G
Sbjct:   77 PMSPPEMKPDTAMLDGLRDDATSPPNFK--NYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREERNCIIDKRQRNRCQYCRYQKCLACGMKREAVQEERQRNA-RGAEDAHPSSSVQ----VSDELSIERLTEMESLVA-------DPSEEFQFLRVGPDSNVPPRYRAPVSSLCQIGNKQIAALVVWARDIPHFGQLELDDQVVLIKASWNELLLFAIAWRSMEYLEDERENGDGTRSTTQPQLMCLMPGMTLHRNSAQQAGVGAIFDRVLSELSLKMRTLRMDQAEYVALKAIVLLNPDVKGLKNRQ--EVDVLREKMFSCLDDYCRRSRSNEEGRFASLLLRLPALRSISLKSFEHLYFFHLVAEGSISG 453          

BLAST of retinoid x receptor vs. nr
Match: gi|1005940533|ref|XP_015788497.1| (PREDICTED: retinoic acid receptor RXR-alpha-B-like [Tetranychus urticae])

HSP 1 Score: 405.986 bits (1042), Expect = 3.602e-136
Identity = 208/350 (59.43%), Postives = 245/350 (70.00%), Query Frame = 0

Query:   35 PDVSLLLNAHSPALPRPTSPAVHYPPLSGSKHFCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELVYACRENKACIIDKRQRNRCQYCRYMKCLATGMRREAVQEERNRGGHKGAEAAEPVESSTGAGGLGGEMAIDRIVAAEHISEQGGAFSRQESDDLQAHMPGGFDGDQPNKRKMLQQLVEWAKHIPHFTDLKIEDRIKLIRAGWNELLIAGCAFRSMNQEDGILWADSQFIKRENAHLAGVGDIFDRVLVELVGKMKEMKMDKAELGCLRAIILFNPDAKGLEQDPALQVESFREKVYATLEEYCRTNHENEPSRFAKLLLRLPALRSIGLKCVEHLFFYKLIKD 384
            P  S+ L +   A P PT       PLSGSKH CSICGDRASGKHYGVYSCEGCKGFFKRTVRK+L YACRE K CIIDKRQRNRCQYCRY KCL  GM+REAVQEER R   K     E   +S        +M I+RI+ AE  SE      R ++ DL   +P  +        + L QL+EWAKHIPHF DL IED+I L+++GWNELLIAG +  SMN +DGI+ A    + R +AH AGVG IFDRVL ELV KM+E+KMDK ELGCLR+I+LFNP+AK L+     Q+E  REKVYA  E+YC++ +  +  RFAKLLLRLPALRSIGLKC+EHLFF+KLI D
Sbjct:   81 PSNSISLPSTPVASPSPTPRYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLTYACREEKNCIIDKRQRNRCQYCRYQKCLIMGMKREAVQEERQRNKDKNDNEVESTSTS------HNDMPIERILEAELRSE-----PRNDNLDLNDSIPNIWQAAD----RQLYQLIEWAKHIPHFCDLPIEDQIVLLKSGWNELLIAGFSHASMNVKDGIVLATGLVVHRNSAHQAGVGAIFDRVLTELVAKMRELKMDKTELGCLRSIVLFNPEAKHLKS--ISQIELLREKVYAVFEDYCKSTYPEQAGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGD 413          

BLAST of retinoid x receptor vs. nr
Match: gi|1059423579|ref|XP_017784458.1| (PREDICTED: retinoic acid receptor RXR-alpha-B isoform X2 [Nicrophorus vespilloides])

HSP 1 Score: 404.445 bits (1038), Expect = 6.894e-136
Identity = 222/414 (53.62%), Postives = 266/414 (64.25%), Query Frame = 0

Query:   27 PQSPLELKPDVSLLLNA---------HSP-----ALPRPTSPAVH----------YPP---LSGSKHFCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELVYACRENKACIIDKRQRNRCQYCRYMKCLATGMRREAVQEERNRGGHKGAEAAEPVESSTGAGGLGGEMAIDRIVAAEHISEQGGAFSRQESDDLQAHMPGGFDGDQPNKRKMLQQLVEWAKHIPHFTDLKIEDRIKLIRAGWNELLIAGCAFRS--MNQEDGILWADSQFIKRENAHLAGVGDIFDRVLVELVGKMKEMKMDKAELGCLRAIILFNPDAKGLEQDPALQVESFREKVYATLEEYCRTNHENEPSRFAKLLLRLPALRSIGLKCVEHLFFYKLIKDDGPNGNGADVNDVAAQSLELFIKEILE 411
            PQSPL++KPD + L+++         HSP     A     SP             YPP   LSGSKH CSICGDRASGKHYGVYSCEGCKGFFKRTVRK+L YACRE+K C IDKRQRNRCQYCRY KCLA GM+REAVQEER R   +     E   +      +  EM I+RI+ AE  +E     S+ E  +L+  +            K L QLVEWAKHIPHFT L + D++ L+RAGWNELLIA  + R+   + ++GI+ A    I R +AH  GVG IFDRVL ELV KM+EMKMDK E+GCLR IILFN D +GL+     +VE  REKVYA LEEY RT H NEP RFAKLLLRLPALRSIGLKC+EHLFF++LI++                 ++ F+KE+LE
Sbjct:   24 PQSPLDMKPDTATLISSGQFSPQGGPHSPGSFSMAHSNILSPGGGGGGAKGVGSPYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREDKNCTIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKERDTSEVESTST------INSEMPIERILEAERRTE----CSKSEKPELENAVTNICQATN----KQLYQLVEWAKHIPHFTGLPVMDQVLLLRAGWNELLIAAFSHRTTEFDAKEGIVLATGLTIHRNSAHQIGVGGIFDRVLTELVSKMREMKMDKTEIGCLRCIILFNSDVRGLKS--INEVEILREKVYAVLEEYTRTKHPNEPGRFAKLLLRLPALRSIGLKCLEHLFFFRLIRN---------------VPIDTFLKEMLE 406          

BLAST of retinoid x receptor vs. nr
Match: gi|805758577|ref|XP_012149394.1| (PREDICTED: retinoic acid receptor RXR-alpha-B isoform X4 [Megachile rotundata])

HSP 1 Score: 403.675 bits (1036), Expect = 1.248e-135
Identity = 217/387 (56.07%), Postives = 257/387 (66.41%), Query Frame = 0

Query:   27 PQSPLELKPDVSLLLNA--HSPALPRP--------------TSPA------VHYPP---LSGSKHFCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELVYACRENKACIIDKRQRNRCQYCRYMKCLATGMRREAVQEERNRGGHKGAEAAEPVESSTGAGGLGGEMAIDRIVAA----EHISEQGGAFSRQESDDLQAHMPGGFDGDQPNKRKMLQQLVEWAKHIPHFTDLKIEDRIKLIRAGWNELLIAGCAFRSMNQEDGILWADSQFIKRENAHLAGVGDIFDRVLVELVGKMKEMKMDKAELGCLRAIILFNPDAKGLEQDPALQVESFREKVYATLEEYCRTNHENEPSRFAKLLLRLPALRSIGLKCVEHLFFYKLIKD 384
            PQSPL++KPD + L+NA   SP+ P                TSP+        YPP   LSGSKH CSICGDRASGKHYGVYSCEGCKGFFKRTVRK+L YACRE K+CIIDKRQRNRCQYCRY KCLA GM+REAVQEER R   +     E   S      L  +M I+RI+ A    E+  EQ G +    S    A              K L QLV WAKHIPHFT L +ED++ L+RAGWNELLIA  + RS++ +DGI+ A    + R +A  AGVG IFDRVL ELV KM+EMKMD+ ELGCLR+IILFNP+ +GL+     +V   REK+YA LE YCR    ++P RFAKLLLRLPA+RSIGLKC+EHLFF+K+I D
Sbjct:   22 PQSPLDMKPDTASLINAGNFSPSGPNSPGSFNAGCHSNLLSTSPSGQNKAVAPYPPNHPLSGSKHLCSICGDRASGKHYGVYSCEGCKGFFKRTVRKDLSYACREEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKERDQSEVESTSS------LHSDMPIERILEAEKRVEYKMEQQGNYENAVSHICNA------------TNKQLFQLVAWAKHIPHFTSLPLEDQVLLLRAGWNELLIASFSHRSIDVKDGIVLATGITVHRNSAQQAGVGTIFDRVLSELVSKMREMKMDRTELGCLRSIILFNPEVRGLKS--IQEVTLLREKIYAALEGYCRVAWPDDPGRFAKLLLRLPAIRSIGLKCLEHLFFFKMIGD 388          

BLAST of retinoid x receptor vs. nr
Match: gi|1325306801|ref|XP_023335012.1| (retinoic acid receptor RXR-like [Eurytemora affinis])

HSP 1 Score: 402.905 bits (1034), Expect = 1.374e-135
Identity = 208/369 (56.37%), Postives = 256/369 (69.38%), Query Frame = 0

Query:   51 PTSPAVHYPP---LSGSKHFCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELVYACRENKACIIDKRQRNRCQYCRYMKCLATGMRREAVQEERNRGGHKGAEAAEPVESSTGAGGLGGEMAIDRIVAAE-----HISEQGGAFSRQESDDLQAHMPGGFDGDQPNKRKMLQQLVEWAKHIPHFTDLKIEDRIKLIRAGWNELLIAGCAFRSMNQEDGILWADSQFIKRENAHLAGVGDIFDRVLVELVGKMKEMKMDKAELGCLRAIILFNPDAKGLEQDPALQVESFREKVYATLEEYCRTNHENEPSRFAKLLLRLPALRSIGLKCVEHLFFYKLIKDDGPNGNGADVNDVAAQSLELFIKEILE 411
            PT+P   YPP   LS +KH CSICGDRASGKHYGV+SCEGCKGFFKRTVRKEL YACRE K C +DKRQRNRCQYCRYMKCL+ GM+REAVQEER+ G     ++ + ++  +     G E+ I+ I+ AE     H +E   + S Q   D+   M G +   +      LQ LVEWA+HIPHF  L I+D++ L+R GWNEL+I G A RS+   +GI+ AD  F  RE AH AGVG ++DRVLVELVGKM EMKMD++ELGCLR I+LFNPDAKGL +    +VE  RE+ YATLEEY R    N+  RFAKLLLRLPALRSIGL+C EHLFF+K+I D+          D+ + +LE  +KE+LE
Sbjct:   32 PTTPQGGYPPGHPLSNAKHMCSICGDRASGKHYGVFSCEGCKGFFKRTVRKELSYACREEKNCTVDKRQRNRCQYCRYMKCLSMGMKREAVQEERSLGKGGKDDSGDTMDGVS----YGNEIPIENILEAENRCDKHQAEILASLSLQ---DIDTSMEGKY---KLAANIQLQSLVEWARHIPHFNGLSIDDQVALLRNGWNELMIIGFAHRSVGNSEGIMLADGIFATRETAHEAGVGMVYDRVLVELVGKMTEMKMDRSELGCLRTIVLFNPDAKGLTEIG--KVEQIRERAYATLEEYTRNMSPNDNGRFAKLLLRLPALRSIGLRCDEHLFFFKMISDNQGE------FDIRSSTLEFTLKELLE 382          

BLAST of retinoid x receptor vs. nr
Match: gi|1269859024|gb|ATO74595.1| (ultra spiracle [Tetranychus cinnabarinus])

HSP 1 Score: 404.06 bits (1037), Expect = 2.149e-135
Identity = 207/350 (59.14%), Postives = 244/350 (69.71%), Query Frame = 0

Query:   35 PDVSLLLNAHSPALPRPTSPAVHYPPLSGSKHFCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELVYACRENKACIIDKRQRNRCQYCRYMKCLATGMRREAVQEERNRGGHKGAEAAEPVESSTGAGGLGGEMAIDRIVAAEHISEQGGAFSRQESDDLQAHMPGGFDGDQPNKRKMLQQLVEWAKHIPHFTDLKIEDRIKLIRAGWNELLIAGCAFRSMNQEDGILWADSQFIKRENAHLAGVGDIFDRVLVELVGKMKEMKMDKAELGCLRAIILFNPDAKGLEQDPALQVESFREKVYATLEEYCRTNHENEPSRFAKLLLRLPALRSIGLKCVEHLFFYKLIKD 384
            P  S+ L +   A P PT       PLSGSKH CSICGDRASGKHYG YSCEGCKGFFKRTVRK+L YACRE K CIIDKRQRNRCQYCRY KCL  GM+REAVQEER R   K     E   +S        +M I+RI+ AE  SE      R ++ DL   +P  +        + L QL+EWAKHIPHF DL IED+I L+++GWNELLIAG + RSMN +DGI+ A    + R +AH AGVG IFDRVL ELV KM+E+KMDK ELGCLR+I+ FNP+AK L+     Q+E  REKVYA  E+YC++ +  +  RFAKLLLRLPALRSIGLKC+EHLFF+KLI D
Sbjct:   81 PSNSISLPSTPVASPSPTPRYPPNHPLSGSKHLCSICGDRASGKHYGAYSCEGCKGFFKRTVRKDLTYACREEKNCIIDKRQRNRCQYCRYQKCLIMGMKREAVQEERQRNKDKNDNEVESTSTS------HNDMPIERILEAELRSE-----PRNDNLDLNDSIPNIWQAAD----RQLYQLIEWAKHIPHFCDLPIEDQIVLLKSGWNELLIAGFSHRSMNVKDGIVLATGLVVHRNSAHQAGVGAIFDRVLTELVAKMRELKMDKTELGCLRSIVPFNPEAKHLKS--ISQIELLREKVYAVFEDYCKSTYPEQAGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGD 413