wd repeat and hmg-box dna-binding protein 1, maker-scaffold1959_size23944-snap-gene-0.6 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. L. salmonis genes
Match: EMLSAG00000000659 (supercontig:LSalAtl2s:LSalAtl2s1105:15895:22907:-1 gene:EMLSAG00000000659 transcript:EMLSAT00000000659 description:"maker-LSalAtl2s1105-augustus-gene-0.32") HSP 1 Score: 627.861 bits (1618), Expect = 0.000e+0 Identity = 396/1058 (37.43%), Postives = 601/1058 (56.81%), Query Frame = 0 Query: 12 LSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTAL-AVSGDGRYLLA-GSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDG--LAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYE-LAIMDSQGYWGLIDKMTFVEDNEEQDVEEEEDVTKTTHDEGDLDADQLAALMEDDDDNENSFSIRKIKRDTGF------LSEDDSNMSKPHFRGEDQ-------ERGVEPVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPR----ASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRGSEPLAEVEETQSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQEEQEQQ---RAQSQMSHADMFEDQGGDEQAEEEEEDDTNAPSNPILEAKMKRNLLGSGGRSRTIIPD--SQGDAGRNPFARKSVPNTP-SGAIRKGDTVFDDMTLKSQSSRNRGSFGDRKFKPGTGIKVKPAFGKQSTIVLKKTVPAKDNGAQ-----ALSPLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDKDQYRSPRVP--------KRKSEDELTASPASK 1027 +S +++ H EG ++Y P + T G+DGEVR ++ +DDD+ SHL GDETLA+AV F+ +A+ TN + Y + +G + ++ RFTAD T L V +G+ L+A GSDDM VK+++ ++K+ +F+GHEA ILSV LDP+ + VS+SCDG++ +WNIA E +I+ + L + +D ++K+ V +P G A+ ++ + Y +G T+V + K+E + V+ W +G+++ TS+G+I IW + D S+ + R GI +AW PSK E ++ ++ + YWG++ + E+NE++ E + + + ++ + DDD+EN+FSI+KIK GF L D N+S RG D+ E+ + + P AP+ D + +Q FQP +TP LSSRFM WNS+G+VK N ++E++I++EFHDT+IHH+FH+ N H ++MA LS +V A+E ++ AS++ ASSD + EWSI+MP EE+L IC G W+AA TD+R LRIF+ G Q + +L GP++ L+GH +++ + H G L + S+ AV D+ + +RH FTPLP P++ L W GFSDEGTP DS G VR+ WT++C+ S K KSD HF++G+SE+E VR I CKG YP T P PTV ++P LPLC+ +EK LEE+ K +L+ + + +A ET +IKLFALA+K+D E RALEICKLM+ T+ +A++YAS R++QLA ++++LA ++E+E++ R + S DMFE Q +EQ E +D NP+L AK+K+ I D SQGD RNPF + + NTP +G+IR G VFD ++ SQ+S+ + S + F T +K KQ I +V +N + L GF LWL EN I + GL++WK+L K +KD+Y+ PR P KR ED + + S+ Sbjct: 190 ISDLKYTHREGNCIIKYAPSSGKIYTGGADGEVREFKNMDDDESKSHLIGDETLALAVGKTHFYTSATNTNRVMSYKIEDGSEDCIVIRFTADVTTLDIVEKEGKILIAAGSDDMIVKVMNLNSHKEFIFKGHEASILSVCLDPKNLDK--VVSTSCDGSIILWNIADE-KIKKIHNSVLPRFSDFQSSKTLSQVVWNPADGSTFAVAHQNGIYFYNSTNG-TEVKNFQMNNSDDKNEYLSVLDWFINGEYIVGGTSSGKIIIWAYKDGSIHYNNTPGRSNGIRSIAWSPSKIEEISFLNKEAYWGIL-TVDLQEENEDRLEGANEMLNEN-------EMMRVFEENDGDDDDENAFSIKKIKASAGFQEDQEGLDVFDPNISS---RGIDEKVGEILMEKNISKAENP------APLSSFD----MKLQDTFQPASTPVHLSSRFMVWNSIGIVKAQNLDDESAIDIEFHDTSIHHAFHLPNPHGYTMACLSNLAVVFAAEADGEEEDEDHIASKLNVHYFASSDYNKEWSIDMPKGEEILCICIGSSWIAAGTDKRNLRIFTLAGMQKNVFSLNGPLVTLSGHGDYIFIVTHFGAPLVHNQSLYVAVLDI-SNYKRHLISHFTPLPLTPSSSLTWAGFSDEGTPTFSDSVGVVRIFDYS-SHQWTEVCNMSSYCKGKSDSHFMLGLSEKEEIVRAIKCKGTKYPVTVPKPTVTVLPMQLPLCDQGSEKTTLEEKYLKGEILN---KNEDDIAATNET----IIKLFALAIKSDQERRALEICKLMNMDTLKIAVKYASKLRKLQLANKVNELARQISEKEEERRDKLRLSTLCSQNDMFETQEEEEQEENGHQDSA-LQDNPLLNAKIKK----KNNVPLKCISDTQSQGDT-RNPFKKTLLKNTPQAGSIRTG-LVFDSISQSSQNSQIKSSQDN--FPNKTIVKKSE---KQRLITHSSSVRQGNNDINKETQSSYKQLKGFLLWLXENPQDSNNIVKNKE-------LGLKIWKELPKVEKDKYKVPRTPLSIVSTNRKRSLEDHIVRNTDSQ 1194
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. L. salmonis genes
Match: EMLSAG00000001111 (supercontig:LSalAtl2s:LSalAtl2s1186:117586:119588:-1 gene:EMLSAG00000001111 transcript:EMLSAT00000001111 description:"maker-LSalAtl2s1186-snap-gene-1.40") HSP 1 Score: 62.3882 bits (150), Expect = 3.197e-10 Identity = 62/277 (22.38%), Postives = 123/277 (44.40%), Query Frame = 0 Query: 7 RGSATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDD--DDPIS-HLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKD-HVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKY-LAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLA 278 R + +L HT+G S+++++P+G + + +D ++++ D + IS H G +A + +D R V+AS T++ + L+ G+ + + + +++GS D +V++ D +T K H P+ +V + + VSSS DG RIW+ A QC+ L ++ + V P GKY LA +++++ ++ G K S K + + G ++ S + ++IW+ K + Sbjct: 17 RPNYSLKFTLAGHTKGVSAVKFSPNGEWLASSSADKLIKVWGSYDGKFEKTISGHKLGISDVAWS-SDSRLLVSASDDKTLKIWELSSGKCLKTLKGHSNYVFCCNFNPQSNLVVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFN---RDGSLIVSSSYDGXCRIWDTASG---QCLKTLIDNDNPPVS----FVKFSPNGKYILAATLDNTLKLWEYSKG--KCLKTYSGHRNEKYCVFANFS-VTGGKWIVSGSEDNMVYIWNLQTKEIV 279
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. L. salmonis genes
Match: EMLSAG00000006041 (supercontig:LSalAtl2s:LSalAtl2s327:367648:370815:1 gene:EMLSAG00000006041 transcript:EMLSAT00000006041 description:"maker-LSalAtl2s327-augustus-gene-3.42") HSP 1 Score: 53.5286 bits (127), Expect = 1.343e-7 Identity = 50/204 (24.51%), Postives = 96/204 (47.06%), Query Frame = 0 Query: 25 SLRYTPDGSTVVTCGSDGEVRLY--QGIDDDDPISHLAGDETLAVAVTDERFFVAASGTN-TIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVD-TQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLA-IPMESSVVIYA 223 ++ ++PD T+++ + G+V +Y + + + G L++A + + ++A+ T+ I +S+ G+ + +LA S D + LL GSDD +KL + + GH + +LSV P + E VS S D +V++W QCV +D A S P G+ +A + ++S+++Y+ Sbjct: 113 TVAFSPDSETLISGANAGKVNIYCVETGQNKQQLLDTRGKFILSIAYSPDGKYIASGATDGIINIFSMPTGKQXHALEGHALPIRSLAFSKDSKRLLTGSDDGHMKLYEVSHGSLIGTLSGHTSWVLSVQFSP---DNEXFVSGSSDRSVKVWE---STTKQCVHTFTDHSDQVWAAS-----YSPNGRKIATVSEDASILMYS 305
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. L. salmonis genes
Match: EMLSAG00000003862 (supercontig:LSalAtl2s:LSalAtl2s209:625539:633615:-1 gene:EMLSAG00000003862 transcript:EMLSAT00000003862 description:"maker-LSalAtl2s209-snap-gene-5.15") HSP 1 Score: 53.1434 bits (126), Expect = 3.389e-7 Identity = 60/269 (22.30%), Postives = 105/269 (39.03%), Query Frame = 0 Query: 8 GSATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRL---YQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDT-QTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDF 272 S +S + H+ + ++PD S +++C DG +RL Y+G H+ AV +F + QGY Y + D TV L T Q + +F GH + + +A P + S S D +VR+W+ N ++ + G A +ST +A P G++LA S V++ W L A + + +A+++DG+ LA +++ + +W F Sbjct: 389 NSGVVSRTLYGHSGPVYGISFSPDKSMLLSCSEDGTIRLWICYRG--------HM-------YAVWHVKF--------SPQGY----------------------------YFASAGHDKTVMLWSTEQHHSLRIFAGHFSDVDCIAFHP---NCNYIASGSSDRSVRVWDCVSGNCVRLMTGHKTA--VST------LAFSPDGRFLASGGRDSRVLF-----WDIAHGHLLADLSNHSQTVTALAFSRDGNILAXSSTDFXLAMWXF 590
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|28558055|sp|O13046.1|WDHD1_XENLA (RecName: Full=WD repeat and HMG-box DNA-binding protein 1; AltName: Full=Acidic nucleoplasmic DNA-binding protein 1; Short=And-1) HSP 1 Score: 551.206 bits (1419), Expect = 1.242e-177 Identity = 354/1078 (32.84%), Postives = 563/1078 (52.23%), Query Frame = 0 Query: 15 MRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQ-TYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTR----LSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKMTFVEDNEEQDVEEEEDVTKTTHDE---GDLDADQLAALM---------EDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDI----QPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSR-----ALRGSEP----LAEVEETQSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQEEQEQQRAQSQMSHADMFED-----------QGGDEQAEEEEEDD---------------------TNAPS-NPILEAKMKRNLLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIR--KGDTVFDDM--------------TLKSQSSRNRGSFGDRKFKPGTG-----IKVKPAFGKQSTIVLKKTVPAKDNGAQALS----PLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDK 1003 MR+ H EG + + + G+ +VTCGSDG++R+++ +DDDDP S G++ + A+ + + AAS N IQ ++ +G+ +G++TRFT + + + DG + AGS D VK++ + + + RGH AP+LSV+ DP++ + S+SCDG+VRIW I+ + + L K ND+ AKS +A PK GK++AIP+ +V +Y D + T ++ P + +VAW+ G +L + + G I W+ K+ K +GY IC LAWHP ++A D++G GL++ + + + +Q + +DE GD D D L M EDDDDN + + R R+ G + +DD + P + E V D + V Y + Q PFQ +TP L RFM WNSVGV++C+N+ ++N+I+VEFHDT+IHH+ H+TN+ NH++AD+S+ ++LA E E+ AS++ C +S D S EW ++MP E + AIC G+ W+A AT L+RIFS GG Q E+++L GP++ +A H L+V H GM G + + +L K ++ G PLP + + L W+GF+ EG+P +DS G VRLL+ G W IC+TR K KSDH+++VGI E QVR I CKG+ +P T P P VA++PF LP C+ TEKG +EE+ W+ + S + G E AE ++ Q L+K+FAL+ K + E R +E+ + M + LAI+YAS ++R+ LAQR+S++A + E+ ++ + + + F + GD +A+ ++D +N P+ NP ++ ++ S + I+ +QG NPF + +P+ A + ++ D+M T KS S + K K G ++ KP K T KK VP A ++ P +GFQLWL ENR + + ++G ++S I +G+ ++ L E++ Sbjct: 8 MRYGHPEGHTDVCFDDSGNFLVTCGSDGDIRIWESLDDDDPKSISIGEKAYSFALKNGKVVTAAS-NNAIQLHTFPDGEPDGILTRFTTNANHVVFNTDGTRIAAGSGDFLVKVLQVEDSTQQKTLRGHSAPVLSVSFDPKDI---YLASASCDGSVRIWKISDQTCEAVLPLLEKCNDVFNAKSICRLAWQPKSGKFVAIPVGKAVHLY-DRDSLKNICTLSDDFITQP-------VNIVAWSPCGQYLVAGSVDGCIVAWNIATKACLERIKHEKGYTICALAWHPHLPQIAYTDNEGNLGLLEDV--CQGDVKQPSAKVSSAETKDYDELFDGDDDEDFLNGDMIGHEGAVNDEDDDDNFTALTGRP--RNRGAIFDDDISSDVPSLKLVGNENPVVEDDQASSVQNFTSVASVKLSYNGPMPTPQQKPFQSGSTPVHLMHRFMVWNSVGVIRCYNDEQDNAIDVEFHDTSIHHAIHLTNSLNHTLADVSQEAVLLACETTEE--LASKLQCLHFSSWDTSKEWMVDMPKGENIQAICLGQGWVACATSALLIRIFSVGGVQKELISLFGPVVCMASHGEQLIVVYHRGMGFDGDQCLGVQLLELGKKKKQVLHGD--PLPLSRKSYLSWLGFTAEGSPCYVDSEGIVRLLNRSLGDTWVPICNTREHCKGKSDHYWVVGIHENPQQVRCIPCKGSRFPPTLPRPAVAVLPFNLPYCQITTEKGQMEEQYWRSQIFSNHSDYLSKHGYECDENFKAEAQKMQQELLMKMFALSCKLEREFRCMELAEFMTQNVMNLAIKYASRSKRLILAQRLSEMALEKAAEQASAEQNEEEDEEEEDFRSRLTAGYSRTATEWGDSRAKPVKQDQYEENNEEEMEEEEKEQEEALESNTPTANPFNKSVKTPDV--SESKLGAILSSNQGRV--NPFKVSASQKSPAFASNSSRSTSILDNMGKFPRKPSASGSPSTSKSDSVIIKPLAPKAKSKQGQATLFHSVQAKPIAKK--TTEEKKAVPTPPKAAADIAENKKPKTGFQLWLDENRPSILSE-NAGLDESEIIKEGMSRFRMLTSEER 1058
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|85541029|sp|P59328.2|WDHD1_MOUSE (RecName: Full=WD repeat and HMG-box DNA-binding protein 1; AltName: Full=Acidic nucleoplasmic DNA-binding protein 1; Short=And-1) HSP 1 Score: 530.791 bits (1366), Expect = 6.653e-170 Identity = 356/1100 (32.36%), Postives = 545/1100 (49.55%), Query Frame = 0 Query: 10 ATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQ-TYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTR-LSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKM---------TFVEDNEEQDVEEEEDVTKTTHDEGDLDADQ---------------------LAALMEDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVE--PVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRAL-----RGSEPLAEVE----ETQSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQEEQEQQ---------------------------RAQSQMSHADMFEDQGGDEQAEEEEE-----DDTNAPSNPILEAKMKRNLLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIRKGDT----VFDDMTLKSQ--SSRNRGSFGDRK-------FKPGTGIKVKPAFGKQSTIVLKKTVPAKDNGAQALS--------------PLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDKDQY 1006 AT MR+ HTEG + + + GS +VTCGSDG+VR+++ +DDDDP S G++ + A+ + + A S NT+Q Y+ EG +G++TRFT + + +G G + AGS D VK+VD + FRGH+AP+LS++ DP++ F S+SCDGTVR+WNI+ + L K+ND+ AKS +A PK GK LA+P+E SV +Y +E W+ + + + +V W+ G +LA+ G I +W+ K K +GY IC LAWHP+ + D +G G+++ + V E+D + D T+ GD D + A D D+ENS + +K D E D +DQ R + P+ P P+ Q PFQ ++TP LS RFM WNSVG+++C+N++++++I+VEFHDT+IHH+ H+ NA N++M LS ++LA E A D AS++ C +S D S EW ++MP E++ AIC G W AAAT LLR+F+ GG Q E+ LPGP++++AGH L + H G G + + +L + + G PLP + L W+GFS EGTP +DS G VR+L+ G G WT +C+ R K KSDH+++VGI E Q+R I CKG+ +P T P P VA++ F LP C+ +TEKG +EE+ W L L G + ++ + Q L+K+ AL+ K + E R +E+ LM + LAI+YAS +R++ LAQ++S+LA + E E Q R +SQ+ A+ ED +E+ E N+ P L +S + SQG NPF K V ++ A+ T + D M S+ +S NR ++ KP + ++ ++ T KT K+N + S P +GFQ+WL ENR Q+ + ++++ I +G+ ++ L E++ + Sbjct: 3 ATQKPMRYGHTEGHTEVCFDDSGSYIVTCGSDGDVRMWEDLDDDDPKSVNVGEKAFSCALKNGKLVTAVSN-NTVQVYTFPEGVPDGILTRFTTNANHVVFNGAGNKIAAGSSDFLVKVVDVMDNSQQQTFRGHDAPVLSLSFDPKDI---FLASASCDGTVRVWNISDQTCAVSWPVLQKSNDVVNAKSICRLAWQPKAGKLLAVPVEKSVKLYRRE-----TWSNPFDLSDSSISQTLNIVTWSPCGQYLAAGAINGLIVVWNVETKDCMERVKHEKGYAICGLAWHPTCSRICYTDVEGNLGVLENVCDLSGKVSSNKVSSRVEKDYNDLFDGDDTS-SAGDFLNDNAVEIPSFSKGIINEDDDNDDIMLAADHDLGDDENSVDVTMLKADLSHKEEGD----------DDQARSIHNLPLIRPQRPFYDGPM-------PTPRQKPFQSSSTPLHLSHRFMVWNSVGIIRCYNDDQDSAIDVEFHDTSIHHATHLLNAFNYTMGTLSHEAILLACESA--DELASKLHCLHFSSWDSSKEWMVDMPQNEDIEAICLGLGWAAAATTALLLRLFTIGGVQKEVFCLPGPVVSMAGHGEQLCIVYHRGTGFDGDQCLGVQLLELGRKKNQVLHGD--PLPLTRKSYLTWLGFSAEGTPCYVDSEGCVRMLNRGLGNTWTPVCNIREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQTSTEKGQMEEQFWHSVLFHNYLDYLAKNGYDYEESIKNQAVKEQQELLMKMLALSCKLEREFRCVELADLMTQNAVHLAIKYASRSRKLILAQKLSELAAEKAAELAETQSEEEKEEDFREKLNAGYSHTTTEWSRPRVRSQVEDAEDREDTVSEEKPESHNHGQNLFQSANSSDTPAL-------------KSGAVFSSSQGWV--NPF--KVVVSSKEPAVSANSTRSANILDSMNKSSRKSTSLNRMENNEKSPVIKPLTPKPRSKQASAASYFQKRTPQADKTEEVKENPKSSSSDAPAVCLQNSENQRPKTGFQMWLEENRSQILSDNPDISDETDIIKEGMIRFRVLSAEERKAW 1054
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|28558057|sp|O75717.1|WDHD1_HUMAN (RecName: Full=WD repeat and HMG-box DNA-binding protein 1; AltName: Full=Acidic nucleoplasmic DNA-binding protein 1; Short=And-1) HSP 1 Score: 525.398 bits (1352), Expect = 1.131e-167 Identity = 357/1106 (32.28%), Postives = 555/1106 (50.18%), Query Frame = 0 Query: 10 ATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQ-TYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKM---------TFVEDNEEQDVEEEEDVTKTTHDEGDLDAD------------------------------QLAALMEDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDI----QPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRGSEPLA----EVEET--------QSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQE----------------------------EQEQQRAQSQMSHADMFEDQGGDEQAEEEEEDDTNAPSNPILEAKMKRNLLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIR--KGDTVFDDM-------TLKSQSSRNRGSFGDRKFKPGTGIKVKPA---FGKQSTIVLKKTVPAKDNGAQALS---------------PLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDK 1003 AT MR+ HTEG + + + GS +VTCGSDG+VR+++ +DDDDP G++ + A+ + A S NTIQ ++ EG +G++TRFT + + +GDG + AGS D VK+VD + + FRGH+AP+LS++ DP++ F S+SCDG+VR+W I+ + L K ND+ AKS +A PK GK LAIP+E SV +Y +E W+ + + + + +V W+ G +LA+ + G I +W+ K K +GY IC LAWHP+ ++ D++G GL++ + + V E+D + D + + GD D Q + ++EDD ENS I +K + L E++ ED + G + L V P Y + Q PFQ +TP L+ RFM WNS+G+++C+N+ ++N+I+VEFHDT+IHH+ H++N N+++ADLS ++LA E D AS++ C +S D S EW I++P E++ AIC G+ W AAAT LLR+F+ GG Q E+ +L GP++++AGH L + H G G + + +L K ++ G PLP + L WIGFS EGTP +DS G VR+L+ G G WT IC+TR K KSDH+++VGI E Q+R I CKG+ +P T P P VA++ F LP C+ ATEKG +EE+ W+ + L + LA E EE+ Q L+K+ AL+ K + E R +E+ LM + LAI+YAS +R++ LAQ++S+LA + E E Q R ++Q+ ED +A++EE+ + + P N +S + SQG NPF + P+ ++ + + D+M T S+++ N S + P K A F K+++ K ++N LS P +GFQ+WL ENR + + ++++ I +G+ ++ L E++ Sbjct: 3 ATRKPMRYGHTEGHTEVCFDDSGSFIVTCGSDGDVRIWEDLDDDDPKFINVGEKAYSCALKSGKLVTAVSN-NTIQVHTFPEGVPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLVKIVDVMDSSQQKTFRGHDAPVLSLSFDPKDI---FLASASCDGSVRVWQISDQTCAISWPLLQKCNDVINAKSICRLAWQPKSGKLLAIPVEKSVKLYRRE-SWSH---QFDLSDNFISQTLNIVTWSPCGQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLAWHPTCGRISYTDAEGNLGLLENVCDPSGKTSSSKVSSRVEKDYNDLFDGDDMS-NAGDFLNDNAVEIPSFSKGIINDDEDDEDLMMASGRPRQRSHILEDD---ENSVDISMLKTGSSLLKEEE----------EDGQEG--------SIHNLPLVTSQRPFYDGPMPTPRQKPFQSGSTPLHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIHHATHLSNTLNYTIADLSHEAILLACE--STDELASKLHCLHFSSWDSSKEWIIDLPQNEDIEAICLGQGWAAAATSALLLRLFTIGGVQKEVFSLAGPVVSMAGHGEQLFIVYHRGTGFDGDQCLGVQLLELGKKKKQILHGD--PLPLTRKSYLAWIGFSAEGTPCYVDSEGIVRMLNRGLGNTWTPICNTREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQIATEKGQMEEQFWRSVIFHNHL---DYLAKNGYEYEESTKNQATKEQQELLMKMLALSCKLEREFRCVELADLMTQNAVNLAIKYASRSRKLILAQKLSELAVEKAAELTATQVEEEEEEEDFRKKLNAGYSNTATEWSQPRFRNQVE-----EDAEDSGEADDEEKPEIHKPGQNSFSKST--NSSDVSAKSGAVTFSSQGRV--NPFKVSASSKEPAMSMNSARSTNILDNMGKSSKKSTALSRTTNNEKSPIIKPLIPKPKPKQASAASYFQKRNSQTNKTEEVKEENLKNVLSETPAICPPQNTENQRPKTGFQMWLEENRSNILSDNPDFSDEADIIKEGMIRFRVLSTEER 1062
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|30913116|sp|Q9C107.1|MCL1_SCHPO (RecName: Full=Minichromosome loss protein 1; AltName: Full=DNA polymerase alpha accessory factor Mcl1) HSP 1 Score: 165.236 bits (417), Expect = 1.453e-40 Identity = 197/839 (23.48%), Postives = 341/839 (40.64%), Query Frame = 0 Query: 16 RFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLV-DTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVV----ALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGV--VAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYW----GLIDKMTFVEDNE-EQDVEEEEDVTKTTHDEGDL--DADQLAALMEDDDDN----ENSF-------SIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNN-EENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEV-LAICCGRDWLAAATDRRLLRIFSSGGNQWEI-LALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVR-LLHSGF--GACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLC-----EAATEKGVLEEELWKCNLLSRALRGS-----------EPLAEVEETQSRCLIKLFALAMKNDHETRALEICKLMDAAT-IGLAIRYASSNRRMQLAQRISKLANDA 806 R+AHT+G + L YT DG ++T GS+ +R +Q D++P S + + E +F S T+ Y + ++ R T +A S DG ++ SD+ VK+V T + + R +A V P + F SSC+G + ++ I+ + N +++ ++ + A HPK A+ V D W ++ L PK+ GV ++W+ +G ++A++ G I IWD + E + + LAW P + L+ +QG +I K E+N+ + + + +T+ + DL D+ + + D D N EN F S + D+ + E+D N++K + +R + LL Q I P +TP + + R++ N VG + + E N+I VEFHD H +H + MA L + AS E P I + EW++ +P + E + I + T +R+FS G I + P +A + ++ ++ + G++ G+ + +++ D+ + G LP P L + FSD G P + DS G + L+H A W + DT + KS ++ ++Q IL KGA+ P P F +P C +A+T VLEE + L L S +A +E + L++L A + R E+ K + T I A + A + +A++I L ++ Sbjct: 9 RYAHTDGLTRLAYTRDGKFLLTVGSNQVIRKFQVGSDEEPDSIDNHQDPITGIAVAENYFCTCSEDATVCVYPIDSPTEHTLLARTTLPIRDVAYSVDGNWIAIASDETAVKVVSSTDSSQIFSLRPAKASNKHVTYSPNGN---FLAVSSCNGILYFYDTQTRELIKFL-----TNTIASLEAESEICSKAAWHPKNGTFAVASTDHFVSVISPDDWLPLYKLL-----PKENHSGVTDISWSSNGMYIAASFKKGGILIWDTQSHEVVVELPYS---TVVALAWQPFENVLSFTTNQGILYSCPDVIPKSILKEENDPTKPLTSSKSKNRTSKELDDLFGSDDEQSQNVNDLDGNSANEENEFINHDGLDSSLDLDGDSYMVDENDLNLAKKRKQKALIDRTTTIENGSSKRRLL----------QASIHKPVHTGSTPWQGNRRYLCLNLVGFIWTVQQDAEHNTITVEFHDETTHRKYHFVDDQKFEMACLDHEGALYASPATESSPGV--IYYKAHVDWSRKSEWAMALPMENESPVTISLSSSVVLVCTSAGYVRVFSRQGFPISIHRSKHLPFVACSSFQDTIITIANDGLSSDGNSRLVYSIEDISRDEMLQ-TGDGVALP--PQGTLESVFFSDVGDPYIYDSTGVLLVLMHWRIPGQAKWIPVLDTNELERRKSRQESYWPVTVADNQFHCILLKGASRYPYFPRPMFTEFDFRIP-CNTNNPDASTSVPVLEELQLRNKLFLTLLEDSIGDGDVTEDEKISIARLEANIDKALLQLIQKACLEERIERVYELTKTLRRTTSIAAAQKIALHHSLTNVAEKIGNLLSNV 815
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|20140995|sp|Q8YTC2.1|Y2800_NOSS1 (RecName: Full=Uncharacterized WD repeat-containing protein alr2800) HSP 1 Score: 78.1814 bits (191), Expect = 2.379e-13 Identity = 76/264 (28.79%), Postives = 116/264 (43.94%), Query Frame = 0 Query: 17 FAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAG--DETLAVAVT-DERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKD-HVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAIPMESSVVIYAQEDGWTKVWTR-----LSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWD 271 HT S+ Y+PD +V+ D ++L+ I L G +E +VA + D + S +++ ++ GQ T +A S D + L +GS+D TVKL D QT K GH I +A P + + S+S D +VR+WNI+ QC L + D A V HP+GK +A V K+W L + D+I+G+ AW+ DG LASA++ + +WD Sbjct: 849 IGHTNSVYSIAYSPDSKILVSGSGDRTIKLWD-CQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSP---DSQTLASASTDSSVRLWNISTG---QCFQILLEHTDWVYA-----VVFHPQGKIIATGSADCTV---------KLWNISTGQCLKTLSEHSDKILGM-AWSPDGQLLASASADQSVRLWD 1090 HSP 2 Score: 66.6254 bits (161), Expect = 9.478e-10 Identity = 76/288 (26.39%), Postives = 133/288 (46.18%), Query Frame = 0 Query: 25 SLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAG--DETLAVAVT-DERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKD-HVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLA-IPMESSVVIYAQEDGWT-KVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDF----YDKSLAFETKTTRGYGICDLAWHPSKYELA 302 S+ + PDG T+ + D ++L+ I D + L G D VA + D +++ +TI+ + +++G+ + T ++A S DG+ L +GS D T+K+ + T + + GH + S+A P + + VS S D T+++W+ I+ + G N++ + VA P G+ LA + ++ SV ++ G K W + P VA++ D LAS ++ + +WD+ Y SL E T YGI A+ P LA Sbjct: 731 SVAFHPDGETLASASGDKTIKLWD-IQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSP---DSKILVSGSGDRTIKLWDCQTHICIKTLHG--HTNEVCS------VAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALP-------VAFSPDRQILASGSNDKTVKLWDWQTGKYISSL--EGHTDFIYGI---AFSPDSQTLA 994 HSP 3 Score: 65.0846 bits (157), Expect = 2.535e-9 Identity = 66/260 (25.38%), Postives = 116/260 (44.62%), Query Frame = 0 Query: 18 AHTEGRSSLRYTPDGSTVVTCGSDGEVRLY---QGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYK-DHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAI-PMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDF 272 HT+ + ++PDG+T+ + +D ++L+ QG SH ++A + D + + SG TI+ ++ G+ T ++A S D + L++GS D T+KL D QT+ GH + SVA P + + S D +VR+WN QC+ D + VA P + LA + +V ++ + G +S+ D I G +A++ D LASA++ + +W+ Sbjct: 766 GHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSA-DGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSP---DGQTLACVSLDQSVRLWNC---RTGQCLKAWYGNTDWALP-----VAFSPDRQILASGSNDKTVKLWDWQTG-----KYISSLEGHTDFIYG-IAFSPDSQTLASASTDSSVRLWNI 1007
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|1346729|sp|P49695.1|PKWA_THECU (RecName: Full=Probable serine/threonine-protein kinase PkwA) HSP 1 Score: 73.559 bits (179), Expect = 5.525e-12 Identity = 53/174 (30.46%), Postives = 87/174 (50.00%), Query Frame = 0 Query: 9 SATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQ---GIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDH-VFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGE 178 + T A+ HT+ ++ ++PDGS V + DG +RL+ G + D + + +++A + + + +T+ + +A G++ T A+A S DG L +GSDD T++L D ++H GH P+ SVA P E S+S DGT+RIW IA E Sbjct: 574 TGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERD--VLQAPAENVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHP---EGTTLASASEDGTIRIWPIATE 742 HSP 2 Score: 70.4774 bits (171), Expect = 5.194e-11 Identity = 64/217 (29.49%), Postives = 98/217 (45.16%), Query Frame = 0 Query: 19 HTEGRSSLRYTPDGSTVVTCGSDGEVRLYQ-GIDDDDPISHLAGDETLAVAVTDERFFVAA-SGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKD-HVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAIPMESSVVIYAQEDGWTKVW 232 HT + ++PDGS V + DG RL+ + + D AVA + + VA+ S TI+ + +A G+ V+ + +LA S DG L+ GSD TV L D + + H F GH + +VA P + S S D T+R+W++A + E ++G + VA HP+G LA A EDG ++W Sbjct: 542 HTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVHGSDS-TVHLWDVASGEALHTFEGHTDWVRAVAFSPDGA---LLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVH--------SVAFHPEGTTLA---------SASEDGTIRIW 737 HSP 3 Score: 59.3066 bits (142), Expect = 1.475e-7 Identity = 75/294 (25.51%), Postives = 120/294 (40.82%), Query Frame = 0 Query: 19 HTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDH-VFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSP-GVVALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYG--ICDLAWHPSKYELAIMDSQG 308 HT+ ++ ++PDG+ + + D VRL+ VA +ER ++ EG + V+ +A S DG + +GS D T +L + T +H V +GH + +VA P S S S DGT+R+W++A E + A+ N +S A SP G + +H + + +S +G T W R VA++ DG LAS + I +WD + E T G+ + +A+HP LA G Sbjct: 500 HTDWVRAVAFSPDGALLASGSDDATVRLWD------------------VAAAEER--------------AVFEGHTHYVLD--------IAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGS---MVASGSRDGTIRLWDVATGKERDVLQAPAE-NVVSLAFSPDGSMLVHGSDSTVHLWDVASGEALHTFEGHTD-WVR-------------AVAFSPDGALLASGSDDRTIRLWDVAAQE---EHTTLEGHTEPVHSVAFHPEGTTLASASEDG 732
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|20532307|sp|Q8YV57.1|Y2124_NOSS1 (RecName: Full=Uncharacterized WD repeat-containing protein all2124) HSP 1 Score: 70.8626 bits (172), Expect = 4.813e-11 Identity = 80/308 (25.97%), Postives = 135/308 (43.83%), Query Frame = 0 Query: 18 AHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVT---DERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYK-DHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGL----------AKANDLSTAKSPGVVAL-------------HPKGKYLA--IPMESSVVIYAQEDGWTKVWTR-LSAPNPPKDEIMGV--VAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRG----YGI 289 H + S+ ++PDG T+ + GSD ++L+Q D + + G E V D + +AS ++I+ + GQ +T +A + S DG+ + AGS+D TVKL Q K GH+ + S++ P + + S+S D T+++W IA ++ + G + +++A + L H G Y +P +S+++ A D ++W R L +P GV V++ DG +A+A + G I +W D SL KT G YGI Sbjct: 1111 GHEDAVYSVSFSPDGQTIASGGSDKTIKLWQ-TSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDWVNSLSFSP---DGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFLP-DSNIIASASLDNTIRLWQRPLISPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSL---LKTLPGNKAIYGI 1410 HSP 2 Score: 62.7734 bits (151), Expect = 1.572e-8 Identity = 61/260 (23.46%), Postives = 116/260 (44.62%), Query Frame = 0 Query: 17 FAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETL-AVAVTDERFFVA-ASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYK-DHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLA-IPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDF 272 A G ++ + DGS + T G+DG ++L+ D + L G++ + ++ T + +A A+ T++ + + +G++ + + + S DG+ L + S D TVKL + K +GH + V+ P + + S+S D T+R+W+ N I+ L NDL + V +P G LA + +V ++ DG L ++ +++ DG ++ASA+ + IW Sbjct: 1360 LAGNSGVYAVSFLHDGSIIATAGADGNIQLWHS-QDGSLLKTLPGNKAIYGISFTPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSP---DGKIIASASADKTIRLWDSFSGNLIKS---LPAHNDLVYS-----VNFNPDGSMLASTSADKTVKLWRSHDG------HLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKIWQI 1601
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|3123058|sp|Q55563.1|Y163_SYNY3 (RecName: Full=Uncharacterized WD repeat-containing protein sll0163) HSP 1 Score: 67.781 bits (164), Expect = 4.580e-10 Identity = 60/267 (22.47%), Postives = 111/267 (41.57%), Query Frame = 0 Query: 27 RYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVT-DERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLA-IPMESSVVIYAQEDGWTKVWTR---LSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYG 288 +++PDG +VT +D +L+ + + D L V + D ++ V AS T + ++ G+ V+ + + A S DG++++ SDD T + + + + RGHE P+ ++ + +++S D T RIW+ G + +A H Y A E +++ D ++W R A ++G V W+ DG L +A++ G +WD + L T G+G Sbjct: 1390 QFSPDGQWIVTGSADKTAQLWNVLGKKLTVLRGHQDAVLNVRFSPDSQYIVTASKDGTARVWN-NTGRELAVLRHYEKNIFAAEFSADGQFIVTASDDNTAGIWEIVGREVGICRGHEGPVYFAQFS---ADSRYILTASVDNTARIWDFLGRPLL-------------------TLAGHQSIVYQARFSPEGNLIATVSADHTARLWDRSGKTVAVLYGHQGLVGTVDWSPDGQMLVTASNDGTARLWDLSGRELL----TLEGHG 1629 HSP 2 Score: 59.3066 bits (142), Expect = 1.494e-7 Identity = 61/240 (25.42%), Postives = 89/240 (37.08%), Query Frame = 0 Query: 75 FVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCV-----------------------DGLAKANDLSTAKSPGVVALHPKG-KYLAIPMESSVVIYAQEDGWTKVW---TRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGY 287 V + TN I G+ V+ TAL S DG+Y S D TVKL + RGHE + SV P +F V+S D T RIWN AGE C DG A+ DL + G+ H + + ++ DG ++W ++ A + W+ DG + +++S G +W + K L T RG+ Sbjct: 1028 LVLTATTNGIAYLWSFHGELINVLRGHQEAITALDWSADGQYFATASADHTVKLWQRHGEEVATLRGHEDWVRSVHFSPHH---QFLVTSGQDNTARIWNFAGEQLTLCQGHADWVRNAEFNCHGQILLTASRDGTARLWDLE-GREIGLCQGHTSWVRNAQFSPDGQWIVTCSADGTARLWDLSSQCFAVLKGHQNWVNNALWSPDGQHIITSSSDGTARVWSRHGKCLG----TLRGH 1259
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|20532311|sp|Q8YRI1.1|YY46_NOSS1 (RecName: Full=Uncharacterized WD repeat-containing protein alr3466) HSP 1 Score: 64.3142 bits (155), Expect = 4.409e-9 Identity = 66/260 (25.38%), Postives = 111/260 (42.69%), Query Frame = 0 Query: 18 AHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVT---DERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKD-HVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAI-PMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDF 272 HT +S+ + PDGST+ + SD VRL++ I+ + G + +V D + S T++ + ++ + T ++A + DG L +GS D TV+L + + K H F+GH + + SV P + S S D TVR+W+I+ G L G V P G LA + +V +++ G K L N +G + ++ DG LAS + + +W+ Sbjct: 1198 GHTSWVNSVVFNPDGSTLASGSSDQTVRLWE-INSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSP---DGTMLASGSDDQTVRLWSISS--------GECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSG--KCLYTLQGHN----NWVGSIVFSPDGTLLASGSDDQTVRLWNI 1439 HSP 2 Score: 62.003 bits (149), Expect = 2.337e-8 Identity = 66/258 (25.58%), Postives = 107/258 (41.47%), Query Frame = 0 Query: 18 AHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVT---DERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKD-HVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWD 271 HT +S+ + PDGS + + SD VRL+ I + G +V D + SG T++ + ++ + T+ +++ S DG L +GSDD TV+L + + + F GH + SV P + S S D TVR+W+I+ +C+ L N+ G + P G LA + V ++T N + VA++ DG LAS + I +WD Sbjct: 1240 GHTSWVNSVVFNPDGSMLASGSSDKTVRLWD-ISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSP---DGAILASGSGDQTVRLWSISSG---KCLYTLQGHNNW-----VGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRS-----VAFSSDGLILASGSDDETIKLWD 1480 HSP 3 Score: 60.077 bits (144), Expect = 1.063e-7 Identity = 65/257 (25.29%), Postives = 106/257 (41.25%), Query Frame = 0 Query: 18 AHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVT---DERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKD-HVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIW 270 HT +++ ++PDG+T+ + D VRL+ I + L G + +V D + S T++ + + + T+ ++ + DG L +GS D TV+L D + K H F+GH + SVA +P + S S D TVR+W I+ + G S S V P G LA + V ++T L N +G V ++ DG LAS + + +W Sbjct: 1156 GHTNWVNAVAFSPDGATLASGSGDQTVRLWD-ISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNP---DGSMLASGSGDQTVRLWEISSSKCLHTFQG-----HTSWVSS---VTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTN-----WVGSVIFSPDGAILASGSGDQTVRLW 1395
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Match: gi|384872644|sp|Q9UUG8.2|TUP12_SCHPO (RecName: Full=Transcriptional repressor tup12) HSP 1 Score: 62.7734 bits (151), Expect = 1.033e-8 Identity = 66/276 (23.91%), Postives = 118/276 (42.75%), Query Frame = 0 Query: 25 SLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAV---TDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADG-TALAVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGV--------------VALHPKGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEI--------MGVVAWAKDGDFLASATSTGRIFIWDFYD 274 S+ ++PDG + T D ++R++ I L G E ++ D + V+ SG T+ + + G+ + ++ T DG T + S DG+++ AGS D +++ + GHE + SVA P + ++ VS S D T+++W E+QCV +A S K G+ V + P GK+ +I +D + W +P+ P ++ + VA + +G A+ + R IW + D Sbjct: 351 SVAFSPDGKYLATGVEDQQIRIWD-IAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQKLIL--HTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSP---DGKYLVSGSLDNTIKLW------ELQCVSNVAP----SMYKEGGICKQTFTGHKDFILSVTVSPDGKW---------IISGSKDRTIQFW----SPDSPHSQLTLQGHNNSVISVAVSPNGHCFATGSGDLRARIWSYED 597
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|957825739|ref|XP_014662660.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like isoform X2 [Priapulus caudatus]) HSP 1 Score: 562.762 bits (1449), Expect = 1.173e-179 Identity = 378/1073 (35.23%), Postives = 543/1073 (50.61%), Query Frame = 0 Query: 10 ATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHP-KGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKY-ELAIMDSQGYWGLIDKMT---FVEDNEEQDVEEEEDVTKTTHDEGDLDADQLAALMEDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVEPV--DAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDD--PRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRGSEP----------LAEVEETQSRCLIKLFALAMKNDHETRALEIC-KLMDAATIGLAIRYASSNRRMQLAQRISKL-------------------------------ANDALQEEQEQQRAQSQMSHADMFEDQGGDEQAEEEEEDDTNA------PSNPIL-----EAKMKRNLLGSGGRSRTIIPDSQGDAGRNPFARKS-VPNTPSGAIRKGDTVFDDM---TLKSQSSRNRGSFG-DRKFKPGTGIKVKPAFGKQS-TIVLKKTVPAKDNGAQ----ALSPLSGFQLWLAENRGQV----AAICDSGTEDSAINIKGLEMWKQLKKEDKDQY 1006 AT MR+AH+EG + L Y +G ++TCG DG VR+++ +DD+D ISH G+ AVA + F AS T ++Q + G+ EG+ITRFTA + + + G LLAGS D T+KLV VF H AP+LSV+LDP E E+ SSSCDGTV+IW +A + + L K ND++ +K+ V+ P + LAIP++ V + + D W T + E++ + ++ G+FLA+A G I +WD + + + IC L W+P K ELA D+QG G+I + ++ +V D+ + D+ L A A +DDDD+E FS +K + T ED + V P+ D G A V+ P +QP FQP ATP LS RFM WNSVG+V+ +N EENSI++ FHDT HH+ HI+N H+M D+S ++LA E D+ P S++TC +S D +W++ MP E + A+C G W+A ATD+ LR+F+ GG Q EI ++PGP++ +AGH N L+V H G +PG + + L K+ P LP +P + L W+GFS EGTP MDS G VR+L+ F W+Q+ +T+S +K KSD+ ++VG++E Q+R ILCKG TYP T P P V L P LPLCE +TEK EE+LW+ LLS L G P + E Q LIK+FAL +++ E RA EIC + M + LAI+YAS + LA R++ L A +A E + AQ ++ + DE +EE DD N S ++ +AKM + L S G NPF S + TP +G +FD M T KSQ S + D+ + KVK A +QS T LK VP D + A +SG QLW NR ++ + + ED A+ ++++KQL KE+++Q+ Sbjct: 3 ATRQPMRYAHSEGHTDLCYDENGRYMLTCGGDGYVRIWESLDDNDAISHQIGENVFAVACKKDTF-ATASDTLSVQLHGFPMGEPEGIITRFTAPVSHMCFNKSGSLLLAGSSDFTIKLVSVTDKTSKVFHEHTAPVLSVSLDPLE---EYVASSSCDGTVKIWTVADQLSEMTWNVLPKTNDITFSKTLCRVSWSPITAECLAIPVDKEVQLM-KRDTWELAHT---LTHEDIKEVVSIATFSPCGNFLAAACRDGLILVWDVSSRQCIERQRHDKNLTICSLVWNPKKKGELAYSDTQGQLGVIGNIIPEEYLSKERAANVGPSADLFADSDDDMLLTAAAQAGDADDDDDDEFDFSKQKKRLQTILDGEDT------------MDSAVVPIATDKMAAGGDAAAVIPMLPRATTPLQPSFQPGATPVELSHRFMVWNSVGMVRSYNTEEENSIDIVFHDTGTHHTMHISNQSQHTMCDISAEAVLLACEGDADEYVPTPSQLTCMHYSSWDSCKDWNVTMPENENIKAVCLGTSWVAVATDQFNLRLFTVGGLQREIFSIPGPVVCMAGHSNQLIVVFHLGTGVPGDQCLGVTLMHLDKTVS--PVLDALRLPISPKSRLSWLGFSSEGTPVTMDSCGIVRILNRSFHNVWSQLANTKSQVKGKSDNFWMVGVTENPAQLRCILCKGKTYPATLPLPIVTLQPCQLPLCEMSTEKSQQEEQLWRSRLLSGHL-GYLPRLGLECEEDAVTEAIAAQQEVLIKMFALCCRSEREFRAAEICEQYMTMQALQLAIKYASRMKHTSLANRLNDLMRYRMEKEEEEEEAARTEQEAADDGDCDFRAAINAGYNHSETEWAQDRLPQRNGRRQHRDDEDKDEEAVDDDNEDAENEDESETLISYVPKKAKMPQRFLASSG------------TVTNPFKVASQIEATPPVTSVRGTGIFDSMRKPTQKSQQSSWKTVPSLDKNRQQQRKKKVKAASKQQSLTDTLKTAVPNSDGPSMPNQTAFRRVSGLQLWREANRDEIREEHPELAEDDDEDHAVAKLYVQLFKQLPKEEREQW 1040
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|670980481|ref|XP_008699974.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 isoform X2 [Ursus maritimus]) HSP 1 Score: 561.222 bits (1445), Expect = 1.513e-179 Identity = 354/1053 (33.62%), Postives = 543/1053 (51.57%), Query Frame = 0 Query: 15 MRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQ-TYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKMT---------------------------------FVEDNEEQDVEEEEDVTKTTHDEGDLDADQLAA--------LMEDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRGSEPLA----EVEET--------QSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQEEQEQQRAQSQMSHADMFEDQGGDEQAEEEEEDDTNAPSNPILEAKMKRNLLGSGGRSRTIIPDSQGDAGRNPFARKS----VPNTPSGAIRKGDTVFDDMTLKSQSSRNRGSFGDRKFKPGTGIKVKPAFGKQSTIVLKKTVPAKDNGAQALSPLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDKDQYRS 1008 MRF HTEG + + + GS +VTCGSDG+VR+++ +DDDDP S G++ + A+ + + A S NTIQ ++ EG +G++TRFT + + +GDG + AGS D VK+VD + FRGH+AP+LS++ DP++ F S+SCDG+V++W I+ + L K ND+ +KS +A PK GK LA+P+E SV +Y +E W+ + + + + VV W+ G +LA+ + G I +W+ K K +GY IC LAWHPS +A D++G GL++ + F+ DN VE + +DE + D LA+ ++EDD ENS + +K + L E++ +DQ + V P + + G P + Q PFQ +TP L+ RFM WNS+G+++C+N+ ++N+I+VEFHDT+IHH+ H++N N+++ADLS ++LA E D AS++ C +S D S EW ++MPP E++ IC G W AAAT LLR+F+ GG Q E+ +LPGP++++AGH L + H G G + + +L K ++ G PLP + LVW+GFS EGTP +DS G VR+L+ G G WT +C+TR K KSDH+++VGI E Q+R I CKG+ +P T P P VA++ F LP C+ ATEKG +EE+ W+ + L E LA E EE+ Q L+K+ AL+ K D E R +E+ LM + LAI+YAS +RR+ LAQR+S+LA + E Q + + + G + A E S P L +++ + +G G+NPF++ + VP SGA+ T + L + F R + VK K S+ P + P +GFQ+WL ENR + + ++++ I +G+ ++ L E++ + S Sbjct: 8 MRFGHTEGHTDVCFDDLGSYIVTCGSDGDVRIWEDLDDDDPKSINVGEKAYSCALKNGKLVTAVSN-NTIQIHTFPEGVPDGILTRFTTNANHVVFNGDGAKIAAGSSDFLVKVVDVMDCSQQKTFRGHDAPVLSLSFDPKDI---FLASASCDGSVKVWQISDQTCTISWPLLQKCNDVINSKSICRLAWQPKSGKLLAVPVEKSVKLYRRE-TWS---NQYDLSDTFISQALNVVTWSPCGQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLAWHPSCGRIAYTDAEGNLGLLENVCEPSGKTSSSKVSSRVEKDYNDLFDGDDTNNAGDFLNDNA---VETHSFTKRIINDEEEDDDLMLASGRPRQRSHILEDD---ENSVDVTMLKTGSSLLKEEEE---------DDQADSIHNV--PLVTSQRSFYDGPMPTPR---QKPFQSGSTPMHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIHHATHLSNTLNYTVADLSYEAILLACE--STDELASKLHCLHFSSWDSSKEWIVDMPPNEDIETICLGLGWAAAATSAMLLRLFTIGGVQKEVFSLPGPVVSMAGHGEQLFIVYHRGAGFDGDQCLGVQLLELGKKKKQILHGD--PLPLTRKSYLVWVGFSAEGTPCYVDSEGIVRMLNRGLGNTWTPVCNTREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQIATEKGQMEEQFWRSVMFHNHL---EYLAKNGYEYEESSKNQAIKEQQELLMKMLALSCKLDREFRCVELADLMTQNAVSLAIKYASRSRRLILAQRLSELAVEKAAELAAPQMEEEEEEDFRKDLNAGYNNTATEW--------SQPRLRNQVEEDAEDTGEADDKEEKPELHKHGQNPFSKSANSSDVPAIKSGAV----TSSNQGRLNPFKASAASYFQKRTSQTDKTEDVKEEHPKNSSSETPAMCPQNTENQR---PKTGFQMWLEENRSSILSDNPDFSDEADIIKEGMIRFRVLSAEERKAWTS 1010
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|972979436|ref|XP_015206147.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Lepisosteus oculatus]) HSP 1 Score: 561.992 bits (1447), Expect = 3.338e-179 Identity = 363/1080 (33.61%), Postives = 569/1080 (52.69%), Query Frame = 0 Query: 15 MRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVD-TQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTR----LSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKMTFVEDNEEQDVEEEE-----------DVTKTTHDEGDLDADQLAALMEDDDDNENSFSIRKIKRDTGFLSEDDSNMS----KPHFRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSR-----ALRGSE----PLAEVEETQSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLAND-------ALQEEQEQQ------------RAQSQMSHAD------MFEDQGGDEQAEEEEEDDTNAPS-NPILEAKMKRNLLGSGGRSRTIIP--DSQGDAGRNPF--ARKSVPNTPSGAIRKGDTVFDDMTLKSQSSRNRGSFGDRK-----FKPGTGIKVKPAFGKQSTIV-LKKTVPA-------KDNGAQALS------------------PLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDK 1003 MR+ HTEG + + + G +VTCGSDG+VR+++ +DDDDP S G++ ++A+ + + A S NT+Q ++ EG +G++TRFT + + +G G+ + GS D VK+V+ + + + RGH+APILSVA DP++ EF SSSCDG+V +W IA + ++ C L K++D+ S +A P GK LA+P+ +SV +Y + D W V T ++ P + VVAW+ G FLA+ + G + +W+ K K +GY +C +AWHP+ ++A D++G GL+D ++ + +E D D G++ + + E+++D++ S+ + + FL +D++++ K G+ + G + P + PV G Q PFQP +TP L RF+ WNSVG+V+ +N+ E+N+I+VEFHDT++HH+ H+TNA H++ADLS+ ++LA E E+ AS++ C +S D + EW +++P E+ A+C G+ W A AT L+R+FS GG Q EI +LPGP++ +AGH L++ H G G ++ + K R+ G PLP + L W+GFS EGTP +DS G VR+L+ G WT +C+TR K KSDH+++VGI E Q+R I CKGA +P T P P VA++PF LP C+ ATEKG +EE W+ L A G E + E+ Q L+K+FAL+ K + E R +E+ ++M + LAIRYAS +RRM LAQR++ LA + A QE +EQ+ RA+S +A E++ G +Q E EE DT NP ++ S + + +P + + NPF + ++ S A + +V D+MT ++ S GS R+ KP + KP Q+T++ L T PA KD+ + S P +GFQLWL ENR + A + E++ + + + +K L +D+ Sbjct: 8 MRYGHTEGHTDVCFDDAGKYIVTCGSDGDVRIWESLDDDDPKSINVGEKAYSLALKEGKLVTAVS-NNTVQVHTFPEGDPDGILTRFTTNANHVVFNGSGQRVAVGSSDFLVKVVEVSDSSQQKTLRGHKAPILSVAFDPKD---EFVASSSCDGSVAVWKIADQMQVACWQVLQKSSDVVNTTSLCRLAWQPSSGKLLAVPVGTSVHLY-ERDSWKNVHTLTDDFITKP-------VNVVAWSPCGQFLAAGSIGGFMTVWNIETKECLEREKHEKGYTVCGMAWHPAGGQIAYTDTEGCLGLLDGVSATTAKNSKVTASKEARDYDDLFDEDDDGLLEEDLGEVRSSPKKPVPEEEEDDDLMPSMSRTRNRGAFLDDDENSLDVGSVKLDRDGDGDDDGASAIVHPTVPAVPRPVYEGP--LPTPPQKPFQPGSTPAHLMHRFLVWNSVGIVRGYNDEEDNAIDVEFHDTSVHHAMHLTNALGHTLADLSQEAVLLACEGTEE--LASKVQCLHFSSWDTNKEWMVDLPKGEDAKALCLGQGWAATATSSLLVRVFSIGGVQREIFSLPGPVVCMAGHGEQLLLVYHRGTGFDGEQALGVQLLHFGKKMRQILHGE--PLPLSHKAHLSWLGFSAEGTPCFVDSEGVVRMLNRSLGNTWTPVCNTRENCKGKSDHYWVVGIHENPQQLRCIPCKGARFPPTLPRPAVAILPFKLPYCQTATEKGQMEEHYWRSVLFHNHFDFLARSGYEFDEATKNQAEKEQQELLMKMFALSCKLEREFRCMELAEMMTQNVVTLAIRYASRSRRMALAQRLNDLALEKATEVAIATQEVEEQEEDFDTKVNAGVPRARSNRQYAKEEEEQEEVEEEEGPDQMETEETPDTRKTRLNPF-------SIGSSSSETASPLPFLGASKEGRVNPFKVSGGGRSSSFSAAQPRVTSVLDNMTRTNRKSSMPGSSIARQDKSLVLKP---LVPKPKSKTQATLLQLSATKPAPKSLEKGKDSATEKESSAGREPLVSAAENTENRKPKTGFQLWLEENRKTIVAE-NPDLEETDVIKEAMGRFKALSADDR 1058
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|1244077514|ref|XP_022348222.1| (WD repeat and HMG-box DNA-binding protein 1 [Enhydra lutris kenyoni]) HSP 1 Score: 561.992 bits (1447), Expect = 3.879e-179 Identity = 357/1087 (32.84%), Postives = 561/1087 (51.61%), Query Frame = 0 Query: 10 ATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQ-TYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKM------TFVEDNEEQDVEEEEDVTKTTHDEGDLDADQLAALMEDDDDNENSFSIRKI----------------KRDTGFLSEDDSNMSKPHFR-GEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDI----QPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRG-SEPLAEVEET--------QSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQEEQEQQ---------RAQSQMSHADM--------FEDQGGDEQAEEEEEDDT-------NAPSNPILEAKMKRNLLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIR--KGDTVFDDMTLKSQSSR--NRGSFGDRK-------FKPGTGIKVKPAFGKQSTIVLKKTVPAKDNGAQALS---------------PLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDKDQYRS 1008 AT MRF HTEG + + + GS +VTCGSDG+VR+++ +DDDDP S G++ + A+ + + A S NTIQ ++ EG +G++TRFT + + +GDG + AGS D +K+VD + FRGH+AP+LS++ DP++ F S+SCDG+V++W I+ + L K ND+ AKS +A PK GK LA+P+E SV +Y +E W + + + + +V W+ G +LA+ + G I +W+ K K +GY IC LAWHP+ +A D++G GL++ + T + ++ D+ +GD DA+ + D+ SFS R I ++ + L +DD+++ + G + E D + L V P Y + Q PFQ +TP L+ RFM WNSVG+++C+N+ ++N+I+VEFHDT+IHH+ H++N N+++ADLS ++LA E D AS++ C +S D S EW ++MP E++ AIC G W AAAT LLR+F+ GG Q EI +LPGPI+++AGH L + HTG G + + +L K ++ G PLP + LVW+GFS EGTP +DS G VR+L+ G G WT IC+TR K KSDH+++VGI E Q+R I CKG+ +P T P P VA++ F LP C+ ATEKG +EE+ W+ + L ++ E EE+ Q L+K+ AL+ K D E R +E+ LM + LAI+YAS +RR+ LAQR+S+LA + + Q R + +++ +Q G++ + E DD N NP ++ ++ +S + +QG NPF + PS ++ + + D+M S+ S NR + ++ KP + ++ ++ T KT K+ + S P +GFQ+WL ENR + + ++++ I +G+ ++ L E++ + S Sbjct: 3 ATQKPMRFGHTEGHTDVCFDDLGSYIVTCGSDGDVRIWEDLDDDDPKSINVGEKAYSCALKNGKLVTAVSN-NTIQVHTFPEGVPDGILTRFTTNANHVVFNGDGGKVAAGSSDFLLKVVDVMDCSQQKTFRGHDAPVLSLSFDPKDI---FLASASCDGSVKVWQISDQTCTISWPLLQKCNDVINAKSICRLAWQPKSGKLLAVPVEKSVKLYRRE-TWN---NQYDLSDSFISQALNIVTWSPCGQYLAAGSINGLIIVWNVETKDCMERVKHEKGYAICGLAWHPTCSRIAYTDAEGNLGLLENVCEPSGKTSSSKVSSKVEKDYNDIF-----DGD-DANNAGDFLNDNAVETPSFSKRIINDEEEDDDLMLASGRPRQRSHILEDDDNSVDVTMLKAGSSLSKEEEEDDQANSIHNLPLVTSQRPFYDGPMPTPRQKPFQSGSTPMHLTHRFMVWNSVGIIRCYNDEQDNAIDVEFHDTSIHHATHLSNTLNYTVADLSYEAILLACE--STDELASKLLCLHFSSWDSSKEWLVDMPQNEDIEAICLGLGWAAAATSAMLLRLFTIGGVQKEIFSLPGPIVSMAGHGEQLFIVYHTGAGFDGDQCLGVQLLELGKKKKQILHGD--PLPLTRKSYLVWVGFSAEGTPCYVDSEGIVRMLNRGLGNTWTPICNTREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFKLPYCQIATEKGQMEEQFWRSIMFHNYLDYLAKNGYEYEESTKNQAIKEQQELLMKMLALSCKLDREFRCVELADLMTQNAVNLAIKYASRSRRLILAQRLSELAVEKAAKLAATQVEEEEEEDFRKELNAGYSNTATEWSQPRLRNQVGEDAEDTRESDDKEEEPELHNHGQNPFCKSANSADV--PAIKSGAVTCSNQGRV--NPFKVSANSKEPSTSVNSARSSNILDNMNKSSKKSTTLNRATNNEKSPVIKPLVPKPKSKQASAASYFQKRTSQTDKTEDVKEEHPKQSSSETLAMSPQNIENQRPKTGFQMWLEENRSSILSDNPDFSDEADIIKEGMMRFRVLSAEERKAWAS 1067
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|957825737|ref|XP_014662659.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like isoform X1 [Priapulus caudatus]) HSP 1 Score: 560.451 bits (1443), Expect = 7.317e-179 Identity = 377/1074 (35.10%), Postives = 543/1074 (50.56%), Query Frame = 0 Query: 10 ATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHP-KGKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKY-ELAIMDSQGYWGLIDKMT---FVEDNEEQDVEEEEDVTKTTHDEGDLDADQLAALMEDDDDNENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVEPV--DAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDD--PRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRGSEP----------LAEVEETQSRCLIKLFALAMKNDHETRALEIC-KLMDAATIGLAIRYASSNRRMQLAQRISKL-------------------------------ANDALQEEQEQQRAQSQMSHADMFEDQGGDEQAEEEEEDDTNA------PSNPIL-----EAKMKRNLLGSGGRSRTIIPDSQGDAGRNPFARKS-VPNTPSGAIRKGDTVFDDM---TLKSQSS--RNRGSFGDRKFKPGTGIKVKPAFGKQS-TIVLKKTVPAKDNGAQ----ALSPLSGFQLWLAENRGQV----AAICDSGTEDSAINIKGLEMWKQLKKEDKDQY 1006 AT MR+AH+EG + L Y +G ++TCG DG VR+++ +DD+D ISH G+ AVA + F AS T ++Q + G+ EG+ITRFTA + + + G LLAGS D T+KLV VF H AP+LSV+LDP E E+ SSSCDGTV+IW +A + + L K ND++ +K+ V+ P + LAIP++ V + + D W T + E++ + ++ G+FLA+A G I +WD + + + IC L W+P K ELA D+QG G+I + ++ +V D+ + D+ L A A +DDDD+E FS +K + T ED + V P+ D G A V+ P +QP FQP ATP LS RFM WNSVG+V+ +N EENSI++ FHDT HH+ HI+N H+M D+S ++LA E D+ P S++TC +S D +W++ MP E + A+C G W+A ATD+ LR+F+ GG Q EI ++PGP++ +AGH N L+V H G +PG + + L K+ P LP +P + L W+GFS EGTP MDS G VR+L+ F W+Q+ +T+S +K KSD+ ++VG++E Q+R ILCKG TYP T P P V L P LPLCE +TEK EE+LW+ LLS L G P + E Q LIK+FAL +++ E RA EIC + M + LAI+YAS + LA R++ L A +A E + AQ ++ + DE +EE DD N S ++ +AKM + L S G NPF S + TP +G +FD M T KSQ S + S + + +VK A +QS T LK VP D + A +SG QLW NR ++ + + ED A+ ++++KQL KE+++Q+ Sbjct: 3 ATRQPMRYAHSEGHTDLCYDENGRYMLTCGGDGYVRIWESLDDNDAISHQIGENVFAVACKKDTF-ATASDTLSVQLHGFPMGEPEGIITRFTAPVSHMCFNKSGSLLLAGSSDFTIKLVSVTDKTSKVFHEHTAPVLSVSLDPLE---EYVASSSCDGTVKIWTVADQLSEMTWNVLPKTNDITFSKTLCRVSWSPITAECLAIPVDKEVQLM-KRDTWELAHT---LTHEDIKEVVSIATFSPCGNFLAAACRDGLILVWDVSSRQCIERQRHDKNLTICSLVWNPKKKGELAYSDTQGQLGVIGNIIPEEYLSKERAANVGPSADLFADSDDDMLLTAAAQAGDADDDDDDEFDFSKQKKRLQTILDGEDT------------MDSAVVPIATDKMAAGGDAAAVIPMLPRATTPLQPSFQPGATPVELSHRFMVWNSVGMVRSYNTEEENSIDIVFHDTGTHHTMHISNQSQHTMCDISAEAVLLACEGDADEYVPTPSQLTCMHYSSWDSCKDWNVTMPENENIKAVCLGTSWVAVATDQFNLRLFTVGGLQREIFSIPGPVVCMAGHSNQLIVVFHLGTGVPGDQCLGVTLMHLDKTVS--PVLDALRLPISPKSRLSWLGFSSEGTPVTMDSCGIVRILNRSFHNVWSQLANTKSQVKGKSDNFWMVGVTENPAQLRCILCKGKTYPATLPLPIVTLQPCQLPLCEMSTEKSQQEEQLWRSRLLSGHL-GYLPRLGLECEEDAVTEAIAAQQEVLIKMFALCCRSEREFRAAEICEQYMTMQALQLAIKYASRMKHTSLANRLNDLMRYRMEKEEEEEEAARTEQEAADDGDCDFRAAINAGYNHSETEWAQDRLPQRNGRRQHRDDEDKDEEAVDDDNEDAENEDESETLISYVPKKAKMPQRFLASSG------------TVTNPFKVASQIEATPPVTSVRGTGIFDSMRKPTQKSQQSSWKTVPSLDKNRQQQRKKKQVKAASKQQSLTDTLKTAVPNSDGPSMPNQTAFRRVSGLQLWREANRDEIREEHPELAEDDDEDHAVAKLYVQLFKQLPKEEREQW 1041
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|527268679|ref|XP_005152400.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Melopsittacus undulatus]) HSP 1 Score: 560.836 bits (1444), Expect = 8.723e-179 Identity = 355/1056 (33.62%), Postives = 537/1056 (50.85%), Query Frame = 0 Query: 10 ATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVD-TQTYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHP-KGKYLAIPMESSVVIYAQEDGWTKVW-TRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKMTFVEDNEEQDVEEEEDVTKTTHDEGDLDADQLAALM-------------EDDDD-NENSFSIRKIKRDTGFLSEDDSNMSKPHFRGEDQERGVEPVDAPPTSGL--LAPVLGGDPHYQVDI----QPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRG-SEPLAEVEET--------QSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLA------------------------------NDALQEEQEQQRAQSQMSHADMFEDQGGDEQAEEEEEDDTNAPSNPILEAKMKRNLLGSGGRSRTIIPDSQGDAGRNPF---ARKSVPNTPSGAIRKGDTVFDDMTLKSQSSRNRGSFGDRKFKPGT--GIKVKPAFGKQSTIVL---------KKTV----PAKDNGAQALS-----------PLSGFQLWLAENRGQV 974 + L MR+ HTEG + + + GS +VTCGSDG+VR+++ +DDDDP S G++ + A+ + R A S NT+Q ++ EG +G++TRFT + + + DG + AGS D VK+V+ T + K FRGH+AP+LS++ DPR+ + S+SCDG+VR+W IA + L K ND+ AKS + P GK LAIP++ V +Y +E W ++ + + + +VAW+ G +LA+ + G I +W+ + K + Y IC LAWHP ++A D++G GL++ + D ++ + + TK +D D D D L+ M EDDDD S R+ + +DD+++ + E D T G L P P Y + Q PFQ +TP L RFM WNSVG+++C+N+ ++N+I+VEFHDT++HH+ H+ N+ NH MADLS ++LA E E+ AS++ C +S D + EW+++MP E++ AIC G+ W A AT L+R+F+ GG Q EI +LPGP++++AGH LMV H G G + + +L K ++ G PL + L+W+GFS EGTP +DS G VR+L+ G G W +C+TR K KSDH+++VGI E Q+R I CKGA +P T P P VA++ F LP C+ TEKG +EE+ W+ + + S+ E++E+ Q L+KLFAL+ K + E R +E+ LM + LAI+YAS +R++ LAQR+S++A N A + Q+ R Q + E+ E+AEE + P NP + + + +S I SQG NPF + K P PS V D M+ S+ + + S K P + KP F + S +KTV K N + + P +GFQ+WL ENR + Sbjct: 3 SALKPMRYGHTEGHTDVCFNDTGSCIVTCGSDGDVRIWENLDDDDPTSFNVGEKAYSCALKNGRLITAVSN-NTVQIHTFPEGAPDGIVTRFTTNANHIIFNSDGTKIAAGSSDFMVKVVEVTDSSKQKTFRGHDAPVLSLSFDPRDV---YLASASCDGSVRVWKIADQTCTTSWPLLQKCNDVINAKSICRLGWQPGNGKLLAIPVDKVVKLYRRE-----TWDSKFDLSDAFITQTLNIVAWSPCGQYLAAGSVDGCIVVWNMESQKCIERMKHEKKYTICGLAWHPKYKQIAYTDTEGNLGLLEN---IGDEKKSNDKVTSTATKDYNDLFDGDDDYLSGDMIEPQSSPKTGANEEDDDDFKPTSGHFRRT-----IIDDDDNSLDIGMIKANSNLLEKEDDDDDQTGGFPALPPSSTQQPFYDGPMPTPRQKPFQSGSTPAHLMHRFMVWNSVGIIRCYNDEQDNAIDVEFHDTSVHHAMHLPNSLNHKMADLSTEAILLACESTEE--LASKLHCIHFSSWDANKEWTVDMPKDEDIEAICLGQGWAACATSALLVRVFTVGGVQKEIFSLPGPVVSMAGHGEQLMVIYHRGTGFDGDQCIGVQLMELGKKKKQILHGD--PLSLTKKSYLIWVGFSAEGTPCYVDSEGIVRMLNRGLGNTWIPVCNTREHCKGKSDHYWVVGIHENPQQLRCIPCKGARFPPTIPRPAVAILSFKLPYCQVTTEKGQMEEQYWRSVVFHNHVDYLSKNGYELDESAKGQAVKEQQELLMKLFALSCKLEREFRCVELADLMTQNVVNLAIKYASRSRKLNLAQRLSEMAVEKASELEAALEDEEEEEEDFRKHLNPGYSNSATEWRQQPVRKVQQDQEMEDAEETDACEEAEEMPKVHKERP-NPFSKGVTSAEV--TTPKSVVIASSSQGRV--NPFKVSSNKKDPVVPSA------NVLDTMSKYSKKNCSSSSQAVNKQSPPVIKPLIPKPKFKQISAASFFQARTPNSSEKTVEEIEEKKGNESHEIKVTAQENTENRRPKTGFQMWLEENRANI 1026
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|426233410|ref|XP_004010710.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 isoform X1 [Ovis aries]) HSP 1 Score: 560.836 bits (1444), Expect = 9.169e-179 Identity = 358/1091 (32.81%), Postives = 562/1091 (51.51%), Query Frame = 0 Query: 10 ATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQ-TYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKMTFVEDNEEQDVEEEEDVTKTTHDEGDL----DADQLAALMEDDDDNENSFSIRKIK---------------RDTGFLSEDDSN--------MSKPHFRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRGSEPLA----EVEET--------QSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRIS------------------------KLANDALQE---EQEQQRAQSQMSHADMFEDQGGDEQAEEEEEDDTNAPSNPILEAKMKRNLLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIRKGDT--VFDDMTLKSQSSR--NRGSFGDRK-------FKPGTGIKVKPAFGKQSTIVLKKTVPAKDNGAQALS---------------PLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDKDQY 1006 AT MR+ HTEG + + + GS +VT GSDG+VR+++ +DDDDP S G++ + A+ + + A S NTIQ ++ EG +G++TRFT + + +GDG + AGS D VK+VD + FRGH+AP+LS++ DP++ F S+SCDG+V++W I+ + L K ND+ AKS +A PK GK LA+P+E SV +Y +E W+ + + + + +V W+ G +LA+ + G I IW+ K+ K +GY IC L+WHP+ ++A D++G GL++ + + + + ++ D DL D ++ ++D+ +SFS + R + EDD N + F+ E+ ++G + P + G P + Q PFQ +TP L+ RFM WNSVG+++C+N+ ++N+I+VEFHDT+IHH+ H+ N N+++ADLSR ++LA E D AS++ C L+S D S EW ++MPP E++ AIC G+ W AAAT LLR+F+ GG Q E+ +LPGP++++AGH L++ H G G + + +L K ++ G PLP + LVW+GFS EGTP +DS G VR+L+ G G WT +C+TR K KSDH+++VGI E Q+R I CKG+ +P T P P VA++ F LP C+ ATEKG +EE+ W+ + L + LA E EE+ Q L+K+ AL+ K + E R +E+ LM + LAI+YAS +RR+ LAQR+S K N E Q R ++Q+ ED G + EE E + S P ++ ++L +S +I SQG NPF P+ ++ G + + D M S+ S NR + ++ KP + +F ++ T +T K+ + S P +GFQ+WL ENR + + ++++ I +G+ +K L E++ + Sbjct: 3 ATQKPMRYGHTEGHTDVCFDDSGSCIVTSGSDGDVRIWEDLDDDDPKSINVGEKAYSCALKNGKLVTAVSN-NTIQVHTFPEGVPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLVKIVDVMDCSQQKTFRGHDAPVLSLSFDPKDI---FLASASCDGSVKVWQISDQTCPVSWPLLQKCNDVVNAKSICRLAWQPKSGKLLAVPVEKSVKLYRRET-WS---NQFDLSDDFISQTLNIVTWSPCGQYLAAGSINGLIIIWNVETKNCIERVKHEKGYAICGLSWHPTCAQIAYTDAEGNLGLLENVC----DPNGKMSNSKVSSRVEKDYKDLFDGDDTSNVSDCLKDNAVKTHSFSKGIVNDEEDDDDLMLASGRPRQRSHILEDDENSVDVTMLKIGSSLFKEEEDDQGGSIHNLPVVASQRPFYDGPMPTPR---QKPFQSGSTPVHLTHRFMVWNSVGIIRCYNDEQDNAIDVEFHDTSIHHATHLLNTFNYTVADLSREAVLLACE--STDELASKLHCLHLSSWDSSKEWIVDMPPNEDIEAICLGQGWAAAATTSLLLRLFTIGGVQKEVFSLPGPVVSMAGHGEQLVIIYHRGTGFDGDQCLGVQLLELGKKKKQILHGD--PLPLTRKSYLVWVGFSAEGTPCYVDSEGIVRMLNRGLGHTWTPVCNTREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAVLSFKLPYCQTATEKGQMEEQYWRSVIFHNHL---DYLAKNGYEYEESTKNQATKEQQELLLKMLALSCKLEREFRCVELAGLMTQNAVNLAIKYASRSRRLILAQRLSELAAEKAAELAATQAEEEEEEDFRKKLNAGYSNTSTEWSQPRLRNQVEEDT--EDNGEADNTEERPEIHKHGES-PFFKSADSSDMLAL--KSGAVISSSQGRI--NPFKVSGSSKEPAISVNSGRSTNILDSMNKSSKKSTAFNRATDDEKSPVIKPLIPKPKSKQASAASFFQKRTSQADRTEEVKEENPKNSSSETPAVCPQNTENQRPKTGFQMWLEENRSHILSDNPDFSDEADIIKEGMVRFKVLSTEERKAW 1064
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|1012280882|ref|XP_015988305.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Rousettus aegyptiacus] >gi|1012280884|ref|XP_015988307.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Rousettus aegyptiacus]) HSP 1 Score: 560.836 bits (1444), Expect = 9.761e-179 Identity = 350/1085 (32.26%), Postives = 560/1085 (51.61%), Query Frame = 0 Query: 10 ATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQ-TYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKMTFVEDNEEQDVEEEEDVTKTTHDEGDL----DADQLAALMEDDDDNENSFSIR---------------KIKRDTGFLSEDDSNM-------SKPHFRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRG-SEPLAEVEET--------QSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQEEQEQQRAQSQMSHADM--------------FEDQGGDEQAEEEEEDDTNAPSNPILEAKMKRNLLGSGGRSRT--------IIPD--SQGDAGR-NPFARKSVPNTPSGAIR--KGDTVFDDM--TLKSQSSRNRGSFGDRK-------FKPGTGIKVKPAFGKQSTIVLKKTVPAK---------------DNGAQALSPLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDKDQY 1006 AT MR+ HTEG + + + GS +VTCGSDG+VR+++ +DDDDP S G++ + A+ + + A S NTIQ ++ EG +G++TRFT + + + DG + AGS+D VK+VD + FRGH+APILS++ DP++ F S+SCDG+VR+W I+ + L K ND+ AKS +A PK GK LAIP+E SV +Y +E W+ + + + + +V W+ G +LA+ + G I +W+ K K +GY IC LAWHP+ +A D++G GL++ + N ++ + ++ D DL D + D+ SFS + ++ + FL +D++++ H + E+++ + + P G Q PFQ +TP L+ RFM WNS+G+++C+N+ ++N+I+VEFHDT+IHH+ H++N N+++ADLS ++LA + A D AS++ C +S D S EW ++MP E+V AIC G+ W AA+T LLR+F+ GG Q E+ +LPGP++++AGH L + H G+ G + + +L K ++ G PLP + LVW+GFS EGTP +DS G VR+L+ G G WT +C+TR K KSDH+++VGI E Q+R I CKG+ +P T P P VA++ F LP C+ TEKG +EE+ W+ L L ++ E EE+ Q L+K+ AL+ K + E R +E+ LM + LAI+YAS +RR+ LAQR+S++A + E Q + + D + G Q EEE ED A +E K + + G S++ I P + + GR NPF + P+ ++ + + D+M + K ++ NR + ++ KP + ++ ++ T KT K D + P +GFQ+WL ENR + + ++++ I KG+ +++ L E++ + Sbjct: 3 ATQKPMRYGHTEGHTDVCFDDSGSCIVTCGSDGDVRIWEDLDDDDPKSINVGEKAYSCALKNGKLVTAVSN-NTIQVHTFPEGVPDGILTRFTTNANHVVFNKDGTKVAAGSNDFLVKVVDVMDCSQQKTFRGHDAPILSLSFDPKDI---FLASASCDGSVRVWQISDQTCAISWPLLQKCNDVINAKSICRLAWQPKSGKLLAIPVEKSVKLYRRE-SWS---NQFDLSDNFISQTLNIVTWSPCGQYLAAGSVNGLIIVWNVETKDCLERVKHEKGYAICGLAWHPTCSRIAYTDAEGNLGLLENVC----NPSGEISSSKVSSRVEKDYNDLFDGDDTSNAGDFLNDNAVETPSFSKGIIHDDEDDDIMLASGRPRQRSHFLEDDENSVDLTMLKTGSSHLKEEEEDDQADSIHNLPLPTPQRQFYDGP--LPTPRQKPFQSGSTPLHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIHHATHLSNTLNYTVADLSHEAILLACKSA--DELASKLHCLHFSSWDSSKEWIVDMPQNEDVEAICLGQGWAAASTSALLLRLFTIGGVQKEVFSLPGPVVSMAGHGEQLFIVYHRGIGFDGDQCLGVQLLELGKKKKQILHGD--PLPLTRKSYLVWVGFSAEGTPCFVDSEGIVRMLNRGLGNLWTPVCNTREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFQLPYCQIGTEKGQMEEQYWRSVLFHNHLDYLAKNDYEYEESTKNQAIKQQQELLMKMLALSCKLEREFRCVELADLMTQNAVNLAIKYASRSRRLILAQRLSEVAIEKAAELAATQVEEEEEEEEDFRKKLNAGYSNTATEWNQPGLRNQVEEEAEDTGEADD---IEEKSEIHKHGQNPFSKSANSCDVPAIKPGAVTSSNQGRVNPFKVSASSKEPTISVNSARSTNILDNMNKSYKKSTAFNRATNNEKSPVIKPLVPKPKSKQASAASYFQKKTSETDKTEEVKEENPKNSSSETSAMCDQDTENQRPKTGFQMWLEENRSNILSDNPDLSDEADIIKKGILLFRVLSTEERKAW 1066
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|1187569812|ref|XP_020738730.1| (WD repeat and HMG-box DNA-binding protein 1 [Odocoileus virginianus texanus]) HSP 1 Score: 560.451 bits (1443), Expect = 1.144e-178 Identity = 355/1092 (32.51%), Postives = 563/1092 (51.56%), Query Frame = 0 Query: 10 ATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQ-TYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKMTFVEDNEEQDVEEEEDVTKTTHDEGDL----DADQLAALMEDDDDNENSFSIRKIK---------------RDTGFLSEDDSN--------MSKPHFRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRG-SEPLAEVEET--------QSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLANDALQE-----------------------------EQEQQRAQSQMSHADMFEDQGGDEQAEEEEEDDT--NAPSNPILEAKMKRNLLGSGGRSRTIIPDSQGDAGRNPFARKSVPNTPSGAIRKGDT--VFDDMTLKSQSSR--NRGSFGDRK-------FKPGTGIKVKPAFGKQSTIVLKKTVPAKDNGAQALS---------------PLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDKDQY 1006 AT MR+ HTEG + + + GS +VTCGSDG+VR+++ +DDDDP S G++ + A+ + + A S NTIQ ++ EG +G++TRFT + + +GDG + AGS D VK+VD + FRGH+AP+LS++ DP++ F S+SCDG+V++W I+ + L K ND+ AKS +A PK GK LA+P+E SV +Y +E W+ + + + + +V W+ G +LA+ + G I IW+ K+ K +GY IC L+WHP+ ++A D++G GL++ + + + + ++ D DL D + + D+ +SFS + R + EDD N + F+ E+ ++G + P + + G P + Q PFQ +TP L+ RFM WNS+G+++C+N+ ++N+I+VEFHDT+IHH+ H+ N N+++ADLS ++LA E D AS++ C L+S D S EW ++MPP E++ AIC G+ W AAAT LLR+F+ GG Q E+ +LPGPI+++AGH L++ H G G + + +L K ++ G PLP + LVW+GFS EGTP +DS G VR+L+ G G WT +C+TR K KSDH+++VGI E Q+R I CKG+ +P T P P VA++ F LP C+ ATEKG +EE+ W+ + L ++ E EE+ Q L+K+ AL+ K + E R +E+ LM + LAI+YAS +RR+ LAQR+S+LA + E E Q R ++Q+ ED G + +A++ EE NP ++ ++ +S + SQG NPF P+ ++ G + + D M S+ S NR + ++ KP + +F ++ T +T K+ + S P +GFQ+WL ENR + + ++++ I +G+ +K L E++ + Sbjct: 3 ATQKPMRYGHTEGHTDVCFDDSGSCIVTCGSDGDVRIWEDLDDDDPKSINVGEKAYSCALKNGKLVTAVS-NNTIQVHTFPEGVPDGILTRFTTNANHVVFNGDGTKIAAGSSDFLVKIVDVMDCSQQKTFRGHDAPVLSLSFDPKDI---FLASASCDGSVKVWQISDQTCPISWPLLQKCNDVVNAKSICRLAWQPKSGKLLAVPVEKSVKLYRRET-WS---NQFDLSDNFISQTLNIVTWSPCGQYLAAGSINGLIIIWNVETKNCIERVKHEKGYAICGLSWHPTCGQIAYTDAEGNLGLLENVC----DPNGKMSNSKVSSRVEKDYNDLFDGDDTSNVGDCLNDNAGKTHSFSKGIVNDEEDDDDVMPASGRPRQRSHILEDDENSVDVTVLKIGSSLFKEEEDDQGGSMHNLPVVTSQRSFYDGPMPTPR---QKPFQSGSTPLHLTHRFMVWNSIGIIRCYNDEQDNAIDVEFHDTSIHHATHLLNTWNYTVADLSHEAVLLACE--STDELASKLHCLHLSSWDSSKEWIVDMPPNEDIEAICLGQGWAAAATSSLLLRLFTIGGVQKEVFSLPGPIVSMAGHGEQLVIVYHRGTGFDGDQCLGVQLLELGKKKKQILHGD--PLPLTRKSYLVWVGFSAEGTPCYVDSEGIVRMLNRGLGHTWTPVCNTREHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAVLSFKLPYCQTATEKGQMEEQYWRSVIFHNHLDYLAKNGYEYEESTKNQATKEQQELLMKMLALSCKLEREFRCVELAGLMTQNAVNLAIKYASRSRRLILAQRLSELAVEKAAELAATQAEEEEEEEEDFRKKLNAGYSNTSTEWSQPRLRNQVE-----EDTGDNGEADDTEERPKIHKHGENPFFKSTDSSDM--PAIKSGAVTSSSQGRI--NPFKVSGNFKEPAISVNSGRSTNILDSMNKSSKKSTALNRATDNEKSPVIKPLIPKPKSKQASAASFFQKRTSQADRTEEVKEENPKNSSSETPAVCPQNTENQRPKTGFQMWLEENRSNILSDNPDFSDEADIIKEGMVRFKVLSAEERKAW 1066
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Match: gi|611972284|ref|XP_007473209.1| (PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Monodelphis domestica] >gi|611972286|ref|XP_007473210.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Monodelphis domestica] >gi|611972288|ref|XP_007473211.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Monodelphis domestica] >gi|1022970190|ref|XP_016283026.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1 [Monodelphis domestica]) HSP 1 Score: 560.066 bits (1442), Expect = 1.629e-178 Identity = 359/1073 (33.46%), Postives = 563/1073 (52.47%), Query Frame = 0 Query: 10 ATLSAMRFAHTEGRSSLRYTPDGSTVVTCGSDGEVRLYQGIDDDDPISHLAGDETLAVAVTDERFFVAASGTNTIQGYSLAEGQSEGVITRFTADGTALAVSGDGRYLLAGSDDMTVKLVDTQ-TYKDHVFRGHEAPILSVALDPRESEPEFAVSSSCDGTVRIWNIAGENEIQCVDGLAKANDLSTAKSPGVVALHPK-GKYLAIPMESSVVIYAQEDGWTKVWTRLSAPNPPKDEIMGVVAWAKDGDFLASATSTGRIFIWDFYDKSLAFETKTTRGYGICDLAWHPSKYELAIMDSQGYWGLIDKMT------------------FVEDNEEQDVEEEEDVTKTTHDEGDLDADQLAALMEDDDDNENSFSIRKIKRDTGFLSEDDSN-----MSKPHFRGEDQERGVEPVDAPPTSGLLAPVLGGDPHYQVDIQPPFQPTATPTRLSSRFMAWNSVGVVKCFNNNEENSIEVEFHDTAIHHSFHITNAHNHSMADLSRSCLVLASEIAEDDPRASRITCRLLASSDLSPEWSIEMPPKEEVLAICCGRDWLAAATDRRLLRIFSSGGNQWEILALPGPILALAGHENWLMVTCHTGMALPGSPSVSFAVFDLRKSGRRHPAGSFTPLPFAPNTELVWIGFSDEGTPGMMDSAGQVRLLHSGFGACWTQICDTRSGLKTKSDHHFLVGISEQEHQVRTILCKGATYPGTTPPPTVALVPFALPLCEAATEKGVLEEELWKCNLLSRALRG-SEPLAEVEET--------QSRCLIKLFALAMKNDHETRALEICKLMDAATIGLAIRYASSNRRMQLAQRISKLAND-------ALQEEQEQQRAQSQMSHAD-----MFEDQGGDEQAEEEEEDDTNAPSNPILEAKMKRNLLGSGGRS------RTIIPDSQGDAGRNPFARKSVPNTPSGAIRK-GDTVFDDMTLKSQSSR--NRGSFGDRKF-------KPGTGIKVKPAFGKQSTIVLKKTVPAKDNGAQALS--------------PLSGFQLWLAENRGQVAAICDSGTEDSAINIKGLEMWKQLKKEDKDQY 1006 AT MR+ H EG + + + GS +VTCGSDG+VR+++ +DDDDP S G+ + A+ + + S NT+Q ++ G +G++TRFT + + + DG + AGS D VK+VD + + FRGH+AP+LSV+LDP + F SSSCDG+V++W I+ + L K ND+ AKS +A PK GK LAIP+ +++ +Y +E +V + P + VV W+ +LA+ + G I +W+ K K +GY IC LAWHP+ ++A D++G GL++ + + + + D + D + ++ + +DD+++ + K L +DDS+ + K + +D+E+ E A P P G P + Q PFQ +TP LS RFM WNSVG+++C+N++++++I+VEFHDT+IHH+ H++N N+++ADLS ++LA E + AS++ C +S D S EW+++MPP E++ AIC G+ W A+AT LLRIFS GG Q E+ +LPGP++++AGH L++ H G G + + +L K R+ G PLP + L W+GFS EGTP +DS G VR+L+ G WT IC+T+ K KSDH+++VGI E Q+R I CKG+ +P T P P VA++ F LP C+ ATEKG +EE+ W+ + L SE E EE+ Q L+K+FAL+ K D E R +E+ +LM + LAI+YAS +RR+ LAQR+S+LA + L+EE+E R + S M + +E ++ E+D L K K+N G S +++ SQG NPF + P+ ++ + D+M S+ S NR + ++ KP + + F + T +K + K+N +LS P +GFQ+WL ENR + A S +E+S I +G+ ++ L E++ ++ Sbjct: 3 ATQMTMRYGHPEGHTDVCFDDSGSCIVTCGSDGDVRIWKDLDDDDPKSINVGERAYSCALKKGKLVTSVSN-NTVQIHTFPNGTPDGILTRFTTNANHVVFNKDGSKIAAGSGDFMVKVVDVMDSSQQKTFRGHDAPVLSVSLDPNDI---FLASSSCDGSVKVWQISDQTCTISWPLLQKCNDVINAKSICRLAWQPKTGKLLAIPVGNTIKLYKRETWKNEVDLSDNFITLP----LNVVTWSPCEKYLAAGSINGCIVVWNVETKDCMERVKHEKGYTICGLAWHPTSRQIAYTDAEGNLGLLENVCDKDGIKSSSKVSGMGNKDYNDLFDGDDDNDNADNSNFLNENLEFQLTPKGKTNYEDDEDDLMLAAGYSKHRNHILEDDDSSVEVASIEKGSYHEKDEEKD-EQTHAMPLMTSQRPFYDG-PRPSLP-QKPFQSGSTPQHLSHRFMVWNSVGIIRCYNDDQDSAIDVEFHDTSIHHATHLSNTLNYTIADLSHEAILLACESTTE--LASKLHCLHFSSWDSSKEWTVDMPPNEDIEAICLGQGWAASATSALLLRIFSIGGVQKEVFSLPGPVVSMAGHGEQLLIVFHRGTGFDGDQCLGIQLLELGKRKRQVLHGD--PLPLTKKSYLAWVGFSAEGTPCYVDSEGIVRILNRRLGNTWTPICNTKEHCKGKSDHYWVVGIHENPQQLRCIPCKGSRFPPTLPRPAVAILSFQLPYCQIATEKGQMEEQFWRSFIFHNHLDYLSENGYEYEESTKNQAIKEQQELLMKMFALSCKLDREFRCVELAELMTQNAVNLAIKYASRSRRLILAQRLSELAVEKATELAATLKEEEEDFRNKLNTSSTTEWSQPMVVNHKVEENNAKDSEEDDEIEEKTDLH-KNKQNPFCKNGNSADGPAIKSVTSSSQGRV--NPFKVSASSKEPAISVNSTSSNILDNMKKLSKKSTVPNRTANKEKSLVLKPLIPKPKSKQVLATNFFQTCTSQTEK-IEEKENPENSLSESPALSAQNIENERPKTGFQMWLEENRSLILADHPSFSEESDIIKEGINRFRILSDEERKEW 1056 The following BLAST results are available for this feature:
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 4
BLAST of wd repeat and hmg-box dna-binding protein 1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of wd repeat and hmg-box dna-binding protein 1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1959_size23944:11939..17030+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold1959_size23944-snap-gene-0.6 ID=maker-scaffold1959_size23944-snap-gene-0.6|Name=wd repeat and hmg-box dna-binding protein 1|organism=Tigriopus kingsejongensis|type=gene|length=5092bp|location=Sequence derived from alignment at scaffold1959_size23944:11939..17030+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'wd repeat and hmg-box dna-binding protein 1' has the following synonyms
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