unnamed protein product, maker-scaffold213_size254208-snap-gene-0.8 (gene) Tigriopus kingsejongensis

Overview
Nameunnamed protein product
Unique Namemaker-scaffold213_size254208-snap-gene-0.8
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of unnamed protein product vs. L. salmonis genes
Match: EMLSAG00000012311 (supercontig:LSalAtl2s:LSalAtl2s899:312632:313651:-1 gene:EMLSAG00000012311 transcript:EMLSAT00000012311 description:"augustus_masked-LSalAtl2s899-processed-gene-3.4")

HSP 1 Score: 51.2174 bits (121), Expect = 1.088e-8
Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0 
Query:   12 RLMVARTAQG---WHCPQCTHVTTTKGNLKSHILSGKHKTMDKNFKCQFCHKFYSTRQSLQVHISTNH 76
            R  VA   +G   + CP+C    T KGNLK+HI +  H+ M KNF+C +CHK +S + +++ HI   H
Sbjct:  273 RTHVATVHEGKKNYPCPECDKNFTQKGNLKAHITT-IHQKM-KNFQCVYCHKLFSQKGNMKTHIKNTH 338
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BLAST of unnamed protein product vs. L. salmonis genes
Match: EMLSAG00000006061 (supercontig:LSalAtl2s:LSalAtl2s328:254086:278509:-1 gene:EMLSAG00000006061 transcript:EMLSAT00000006061 description:"maker-LSalAtl2s328-augustus-gene-2.18")

HSP 1 Score: 47.3654 bits (111), Expect = 2.279e-7
Identity = 25/67 (37.31%), Postives = 38/67 (56.72%), Query Frame = 0 
Query:   10 LTRLMVARTAQGWHCPQCTHVTTTKGNLKSHILSGKHKTMDKNFKCQFCHKFYSTRQSLQVHISTNH 76
            + RL++ R+A G+ C +C   +  +  L++HI   KH   D  F+C  C + + TR SL VH ST H
Sbjct:  156 INRLII-RSASGFTCKKCGKQSAQRTCLRNHI-EAKHIQTD-GFRCPVCTRVFKTRNSLXVHTSTKH 219
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BLAST of unnamed protein product vs. nr
Match: gi|1325293536|ref|XP_023330293.1| (longitudinals lacking protein, isoforms H/M/V-like [Eurytemora affinis] >gi|1325293541|ref|XP_023330294.1| longitudinals lacking protein, isoforms H/M/V-like [Eurytemora affinis])

HSP 1 Score: 129.798 bits (325), Expect = 1.944e-32
Identity = 55/86 (63.95%), Postives = 71/86 (82.56%), Query Frame = 0 
Query:    1 LGGRDDQDPLTRLMVARTAQGWHCPQCTHVTTTKGNLKSHILSGKHKTM-DKNFKCQFCHKFYSTRQSLQVHISTNHRQERDQLYK 85
            LG R D+DP +++ VAR+++GWHCPQC H+++TKGNLKSHILSG+HKT  +K F CQ+C + Y T+QSLQVHISTNHR ERD  Y+
Sbjct:  318 LGSRKDEDPFSQIKVARSSKGWHCPQCIHISSTKGNLKSHILSGRHKTYTEKPFGCQYCDRSYGTKQSLQVHISTNHRAERDAEYQ 403
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BLAST of unnamed protein product vs. nr
Match: gi|1325328197|ref|XP_023345947.1| (uncharacterized protein LOC111714943 [Eurytemora affinis])

HSP 1 Score: 84.7297 bits (208), Expect = 2.603e-17
Identity = 40/80 (50.00%), Postives = 58/80 (72.50%), Query Frame = 0 
Query:    1 LGGRDDQDPLTRLMVARTAQGWHCPQCTHVTTT-KGNLKSHILSGKHKTMDKNFKCQFCHKFYSTRQSLQVHISTNHRQE 79
            LGGR++ D L  ++V +T +GWHCP C++V+ + KGNLK HIL+ +H +  ++F C FC K  S+R SLQVHIS  HR++
Sbjct:    4 LGGRNE-DGLAHVVVMKTIRGWHCPHCSYVSPSQKGNLKVHILN-RHASPGESFGCMFCGKHLSSRSSLQVHISQVHREQ 81
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BLAST of unnamed protein product vs. nr
Match: gi|1067093302|ref|XP_018008501.1| (PREDICTED: broad-complex core protein isoforms 1/2/3/4/5-like isoform X4 [Hyalella azteca])

HSP 1 Score: 57.7658 bits (138), Expect = 7.012e-7
Identity = 37/116 (31.90%), Postives = 51/116 (43.97%), Query Frame = 0 
Query:   22 WHCPQCTHVTTTKGNLKSHILSGKHKTMDKNFKCQFCHKFYSTRQSLQVHISTNHRQERDQLYKDSLESHRKRRRGAEESGGIDPRAVIKTEV--PEDMGILI------ESSMTLQ 129
            W CP C  + +T+ NLK H+ + KH T+   F C  C   Y TR SL  H+S  HR  R   +     + R R           PR V  +E   PE +  ++       SSM L+
Sbjct:  336 WQCPMCHKLLSTRSNLKIHV-ADKHSTLQHAFPCPVCGNIYKTRNSLHNHLSIRHRGVRMPRHPGVPAASRPRYE--------SPRVVHTSEFSRPEPLHAMLGRTPVQSSSMPLE 442
The following BLAST results are available for this feature:
BLAST of unnamed protein product vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 2
Match NameE-valueIdentityDescription
EMLSAG000000123111.088e-841.18supercontig:LSalAtl2s:LSalAtl2s899:312632:313651:-... [more]
EMLSAG000000060612.279e-737.31supercontig:LSalAtl2s:LSalAtl2s328:254086:278509:-... [more]
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BLAST of unnamed protein product vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of unnamed protein product vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 3
Match NameE-valueIdentityDescription
gi|1325293536|ref|XP_023330293.1|1.944e-3263.95longitudinals lacking protein, isoforms H/M/V-like... [more]
gi|1325328197|ref|XP_023345947.1|2.603e-1750.00uncharacterized protein LOC111714943 [Eurytemora a... [more]
gi|1067093302|ref|XP_018008501.1|7.012e-731.90PREDICTED: broad-complex core protein isoforms 1/2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold213_size254208supercontigscaffold213_size254208:972..2266 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold213_size254208-snap-gene-0.8-mRNA-1maker-scaffold213_size254208-snap-gene-0.8-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold213_size254208:972..2266+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold213_size254208-snap-gene-0.8 ID=maker-scaffold213_size254208-snap-gene-0.8|Name=unnamed protein product|organism=Tigriopus kingsejongensis|type=gene|length=1295bp|location=Sequence derived from alignment at scaffold213_size254208:972..2266+ (Tigriopus kingsejongensis)
CTTCCAGTTCTACCCTATACCATAAGTTCACCCTCAATTGGCCCTGGAAG
AGTGTCCTTCCAGGAACTGGGAGGTCGCGATGATCAGGATCCTCTCACCC
GTCTGATGGTGGCCCGAACTGCCCAGGGATGGCATTGCCCCCAGTGCACT
CATGTCACCACCACCAAAGGCAACCTCAAGTCCCACATCTTGTCTGGGAA
GCACAAGACAATGGACAAGAACTTCAAATGCCAGTTTTGTCACAAGTTCT
ACTCGACCAGGCAATCTTTGCAGGTAAGGATGGTACGGAGGGAAAAGTAC
ATCAAACCATTGGAGTTTGGGAACGAGCTAAACTAGAGACCCTGACTGCT
ATGGCTTCCATGGCCATCATCGGGTTCCATTAACCAATGCCCTCAAATTT
GTCAGCTAACTTTTTGCGAGGTAGTTTGCGGACACCGGGAAGAGAACAAG
ACGTATTTGAGAGAGCAATCACGCATTGCCCATTATATGTAACTTTTGAT
GTTTCTAACCTCTGGCTTAGGCGCCTGGCAATACTTTTCTTAATTTACTG
ATGGAATTACGCAGAAACAGTGAATGCAAGGTTTTCAGAATCGTGGACTC
TGGCGTTAGCTGCGGCAACAGCGGCGTGAATGAGCTGAACTCATTCCATT
AAGGTTTGAAACACGACAGCGCTGCCAGGTTGCCAGTCTCGTTTAAGGAT
GTCTAAGCTAAGCCAATTCATTGTGTTTGACGGAAGCATTTTGTTTGAGT
GGCATGGGAAGAAGTAATGTTCATTGTAATGGACGAGTTGGTAATTTAAA
CCCCAGTCGCTGGCTCGGTGGTCGACCAATGAAAACAAATGATGGTCTCC
TTTCACTCTGGTCCATTTGAACGTTCAAGGCAATTGTGGGTCACAATCAT
CGGCCAACTGAATCTAATGCCTCTCCATCCCTTGCTCTCAGGTCCACATT
TCAACCAATCATCGCCAAGAGCGCGACCAATTGTACAAGGATTCGCTCGA
ATCCCATCGAAAGAGGCGGAGAGGGGCCGAAGAATCGGGTGGAATTGATC
CTCGGGCTGTCATCAAGACCGAAGTCCCAGAAGACATGGGCATCCTTATC
GAATCTTCCATGACGCTCCAAGCTGAAGATGATATTGCCATTTCAGTGCC
TCCTTCAAATGATTTTGAATCGGCTTAAATGGAGCCCTGATATCGGCAAG
TACTAGCCGACCACGAGCGGCAATCTAGCGGAATTTTAAGGCCCAGCAAT
GGTATGTTTTGGGGCCACTCAAAGCCCCCCCCCCATGTATTTGTA
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Synonyms
The feature 'unnamed protein product' has the following synonyms
Synonym
Tk11723
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