unnamed protein product, maker-scaffold213_size254208-snap-gene-0.8 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of unnamed protein product vs. L. salmonis genes
Match: EMLSAG00000012311 (supercontig:LSalAtl2s:LSalAtl2s899:312632:313651:-1 gene:EMLSAG00000012311 transcript:EMLSAT00000012311 description:"augustus_masked-LSalAtl2s899-processed-gene-3.4") HSP 1 Score: 51.2174 bits (121), Expect = 1.088e-8 Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0 Query: 12 RLMVARTAQG---WHCPQCTHVTTTKGNLKSHILSGKHKTMDKNFKCQFCHKFYSTRQSLQVHISTNH 76 R VA +G + CP+C T KGNLK+HI + H+ M KNF+C +CHK +S + +++ HI H Sbjct: 273 RTHVATVHEGKKNYPCPECDKNFTQKGNLKAHITT-IHQKM-KNFQCVYCHKLFSQKGNMKTHIKNTH 338
BLAST of unnamed protein product vs. L. salmonis genes
Match: EMLSAG00000006061 (supercontig:LSalAtl2s:LSalAtl2s328:254086:278509:-1 gene:EMLSAG00000006061 transcript:EMLSAT00000006061 description:"maker-LSalAtl2s328-augustus-gene-2.18") HSP 1 Score: 47.3654 bits (111), Expect = 2.279e-7 Identity = 25/67 (37.31%), Postives = 38/67 (56.72%), Query Frame = 0 Query: 10 LTRLMVARTAQGWHCPQCTHVTTTKGNLKSHILSGKHKTMDKNFKCQFCHKFYSTRQSLQVHISTNH 76 + RL++ R+A G+ C +C + + L++HI KH D F+C C + + TR SL VH ST H Sbjct: 156 INRLII-RSASGFTCKKCGKQSAQRTCLRNHI-EAKHIQTD-GFRCPVCTRVFKTRNSLXVHTSTKH 219
BLAST of unnamed protein product vs. nr
Match: gi|1325293536|ref|XP_023330293.1| (longitudinals lacking protein, isoforms H/M/V-like [Eurytemora affinis] >gi|1325293541|ref|XP_023330294.1| longitudinals lacking protein, isoforms H/M/V-like [Eurytemora affinis]) HSP 1 Score: 129.798 bits (325), Expect = 1.944e-32 Identity = 55/86 (63.95%), Postives = 71/86 (82.56%), Query Frame = 0 Query: 1 LGGRDDQDPLTRLMVARTAQGWHCPQCTHVTTTKGNLKSHILSGKHKTM-DKNFKCQFCHKFYSTRQSLQVHISTNHRQERDQLYK 85 LG R D+DP +++ VAR+++GWHCPQC H+++TKGNLKSHILSG+HKT +K F CQ+C + Y T+QSLQVHISTNHR ERD Y+ Sbjct: 318 LGSRKDEDPFSQIKVARSSKGWHCPQCIHISSTKGNLKSHILSGRHKTYTEKPFGCQYCDRSYGTKQSLQVHISTNHRAERDAEYQ 403
BLAST of unnamed protein product vs. nr
Match: gi|1325328197|ref|XP_023345947.1| (uncharacterized protein LOC111714943 [Eurytemora affinis]) HSP 1 Score: 84.7297 bits (208), Expect = 2.603e-17 Identity = 40/80 (50.00%), Postives = 58/80 (72.50%), Query Frame = 0 Query: 1 LGGRDDQDPLTRLMVARTAQGWHCPQCTHVTTT-KGNLKSHILSGKHKTMDKNFKCQFCHKFYSTRQSLQVHISTNHRQE 79 LGGR++ D L ++V +T +GWHCP C++V+ + KGNLK HIL+ +H + ++F C FC K S+R SLQVHIS HR++ Sbjct: 4 LGGRNE-DGLAHVVVMKTIRGWHCPHCSYVSPSQKGNLKVHILN-RHASPGESFGCMFCGKHLSSRSSLQVHISQVHREQ 81
BLAST of unnamed protein product vs. nr
Match: gi|1067093302|ref|XP_018008501.1| (PREDICTED: broad-complex core protein isoforms 1/2/3/4/5-like isoform X4 [Hyalella azteca]) HSP 1 Score: 57.7658 bits (138), Expect = 7.012e-7 Identity = 37/116 (31.90%), Postives = 51/116 (43.97%), Query Frame = 0 Query: 22 WHCPQCTHVTTTKGNLKSHILSGKHKTMDKNFKCQFCHKFYSTRQSLQVHISTNHRQERDQLYKDSLESHRKRRRGAEESGGIDPRAVIKTEV--PEDMGILI------ESSMTLQ 129 W CP C + +T+ NLK H+ + KH T+ F C C Y TR SL H+S HR R + + R R PR V +E PE + ++ SSM L+ Sbjct: 336 WQCPMCHKLLSTRSNLKIHV-ADKHSTLQHAFPCPVCGNIYKTRNSLHNHLSIRHRGVRMPRHPGVPAASRPRYE--------SPRVVHTSEFSRPEPLHAMLGRTPVQSSSMPLE 442 The following BLAST results are available for this feature:
BLAST of unnamed protein product vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of unnamed protein product vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of unnamed protein product vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 3
Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold213_size254208:972..2266+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold213_size254208-snap-gene-0.8 ID=maker-scaffold213_size254208-snap-gene-0.8|Name=unnamed protein product|organism=Tigriopus kingsejongensis|type=gene|length=1295bp|location=Sequence derived from alignment at scaffold213_size254208:972..2266+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'unnamed protein product' has the following synonyms
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