polysaccharide deacetylase, maker-scaffold22_size673200-snap-gene-4.22 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of polysaccharide deacetylase vs. L. salmonis genes
Match: EMLSAG00000001215 (supercontig:LSalAtl2s:LSalAtl2s11:133136:134098:-1 gene:EMLSAG00000001215 transcript:EMLSAT00000001215 description:"maker-LSalAtl2s11-augustus-gene-1.16") HSP 1 Score: 213.386 bits (542), Expect = 8.466e-64 Identity = 118/285 (41.40%), Postives = 166/285 (58.25%), Query Frame = 0 Query: 497 CDWPEDVDCTYTAKSLEQYQLGEEDPVTIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIV----ADGHVLADHSYDHMAHNSKNSPKNAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPVNHTMSYYVRLPYTNAWR--AGN-----VKRDCYACTVPGSSGQKGMAISDRLSAQKKLLFGWDTEWEIDWNKNRFKFGGKEMFFRLAR-DPRKKPQMVILSHDVAHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 CDWPE VDC + ++ E+ V +YLTFDDGP+E T IL L++ +V TFF+NS+NL DPK L+ IV +GHV+ DHS+DHM H S S NAY VE+D +FG N P+L+ D+ EF N TM +Y+RLPYTN WR A N + DC +CT P +SG+ G+ +++ +++ GWDTEW +++ N++K+GG +MF RL P++ Q+VIL+HD + EL FI L K++GY F TI+ Y Sbjct: 4 CDWPEAVDCDIDIDKITSRKIKED--VLLYLTFDDGPSEETETILNVLKKHNVPGTFFVNSKNLFDPKMQ-----TKKLMDIVNRMSKEGHVVGDHSFDHMFHXSL-SVSNAYLSVEKDKTFFGKRNIMPILEST-DNDLIEF---TNFTMFHYIRLPYTNNWRVPAINEGQKPIVSDCVSCTTPRNSGELGIRLANEFYESGRVIMGWDTEWGMNFVTNKYKYGGLQMFTRLKHVRPKRSRQIVILTHDRG-----FTGDAEELSRFILLCKKTGYTFRTIENY 271
BLAST of polysaccharide deacetylase vs. SwissProt
Match: gi|75461936|sp|Q99PX1.1|DEAA_VIBAL (RecName: Full=Chitin disaccharide deacetylase; AltName: Full=Chitin oligosaccharide deacetylase; Flags: Precursor) HSP 1 Score: 91.2781 bits (225), Expect = 3.922e-18 Identity = 88/330 (26.67%), Postives = 134/330 (40.61%), Query Frame = 0 Query: 506 TYTAKSLEQYQLGEEDP-VTIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVAD-GHVLADHSYDHMAHN---------------SKNSPKNAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPVNHTMSYYVRLPYTNAWRAG-NVKRD--C------------YACTV--PGSSGQKGMAISDRLSAQKKLLFGWDTEWE----------------------IDWNKNRFK------FGGKEMFFRLARDPRKKPQMVILSHDV----AHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 T + +L QY + D TIYLTFDDGP + ++ L +++VKATF+ N+ +L D A L + D GH++A+HSYDHM HN + + N+Y+D D F L +L K + N+ + + RLPYTN WR + K D C Y+C P +S + +A+ + L+ GWD +W +D N K F P ++++L+H+ R +L FI+LAK++GY F T+D Y Sbjct: 10 TLVSAALSQYAFAQTDTKGTIYLTFDDGPINASIDVINVLNQEEVKATFYFNAWHL-DGIGDENEDRALEALKLALDSGHIVANHSYDHMVHNCVEEFGPNSAAECNATGDHQINSYQDPAYDASMFA-----ENLSVLEKY-LPNITSYPNYKANEFARLPYTNGWRVTKDFKADGLCATSDDLKPWEPGYSCDTANPSNSVKAAIAVQNILANNGYQTHGWDVDWAPENWGIAMPANSLTEAEPFLGYVDSALNTCAPTTINPINSKAQEFPCGT-PLHADKVIVLTHEFLFEDGKRGMGATQNLPKLAKFIQLAKQAGYVFDTMDNY 331
BLAST of polysaccharide deacetylase vs. nr
Match: gi|1278077876|gb|PIW59071.1| (dehydrogenase [Shewanella sp. CG12_big_fil_rev_8_21_14_0_65_47_15]) HSP 1 Score: 119.013 bits (297), Expect = 3.815e-25 Identity = 96/327 (29.36%), Postives = 141/327 (43.12%), Query Frame = 0 Query: 511 SLEQYQLGEEDPVTIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVA------DGHVLADHSYDHMAHNSKNS--------------PKNAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPVNHTMSYYVRLPYTNAWRAGN-VKRD--------------CYACTVPGS--SGQKGMAISDRLSAQKKLLFGWDTEWE-IDWNK---NRFKFGGKEMFFRL-----------------------ARDPRKKPQMVILSHDV----AHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 L L TIYLTFDDGP + T +L+AL+ ++KATFFIN+ +++ + N +LA VA DGH+LA+HSYDHM HN + P +Y+D D YF + NT V +++ A N+ M+ RLPYTN WR + +K D +ACT S S Q + I + L+ +FGWD +W +W G E+ ++ D ++VIL+HD AHR +++ F+ A+ GY+F T+D Y Sbjct: 13 CLASVSLAHASDKTIYLTFDDGPIDATLGLLDALKDANIKATFFINAFHMY------GEGDENEVLATVALQRLLDDGHILANHSYDHMLHNCTDGVQSGAAYCNQVGLWPVKSYQDAATDFTYF-VTNTAKVAELIPNAASYP-----NNKMTKLARLPYTNGWRVTSKLKGDGLCATSDTVPPWDPAFACTAETSTNSSQVAVQIQNMLAESDYKIFGWDFDWGPENWGVAFPAETMADGVELVNKINQVINTCAPTTMNPLNSRTPNLDCSDGLHDGKVVILTHDFLFENAHRGQGATINLPKIKRFVEEAQRQGYRFDTLDNY 327
BLAST of polysaccharide deacetylase vs. nr
Match: gi|752770359|ref|WP_041417470.1| (dehydrogenase [Shewanella woodyi]) HSP 1 Score: 106.301 bits (264), Expect = 1.289e-20 Identity = 91/312 (29.17%), Postives = 136/312 (43.59%), Query Frame = 0 Query: 524 TIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVADGHVLADHSYDHMAHN-------SKNSPKNAYKDVEEDLKYFGIMNTY--PVLDILWKAD----MKEFIGPV----NHTMSYYVRLPYTNAWR-AGNVKRD--C------------YACTV--PGSSGQKGMAISDRLSAQKKLLFGWDTEWE----------------------IDWNKNRFK------FGGKEMFFRLARDPRKKPQMVILSHDV----AHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 TIYLTFDDGP TPA+++ L +KATF+IN+ +L Q + L+ + GHV+A+HSYDHM HN + + NA D + +N+Y PV D ++ ++ +I + N+ + RLPYTN WR +G +K D C Y C P +S + G+ +S+ L+ + L+ GWD +W +D N K F D +++IL+HD A R +L FI LA +GY+F T+D Y Sbjct: 28 TIYLTFDDGPMNATPALIDTLDNAGIKATFYINAWHLDGIADENEDQALSALIQTLKSGHVVANHSYDHMVHNCVEEFGPTSGAECNATGDHQ--------INSYQDPVYDASMFSENLTVLESYIPNIQSYPNYKAASLARLPYTNGWRSSGELKGDGLCATSDDFKPWEPGYVCDAENPSNSSKAGVEVSNILADKGYLIHGWDLDWAPENWGIPYPANSLTEAEAFLGYVDAALNACAPVTINPVNSKTQTFPCG-DALHADKVIILTHDFLFEDAKRGQGATLNLPKLAKFIELALAAGYQFDTMDNY 330
BLAST of polysaccharide deacetylase vs. nr
Match: gi|169810276|gb|ACA84860.1| (polysaccharide deacetylase [Shewanella woodyi ATCC 51908]) HSP 1 Score: 105.916 bits (263), Expect = 1.420e-20 Identity = 91/312 (29.17%), Postives = 136/312 (43.59%), Query Frame = 0 Query: 524 TIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVADGHVLADHSYDHMAHN-------SKNSPKNAYKDVEEDLKYFGIMNTY--PVLDILWKAD----MKEFIGPV----NHTMSYYVRLPYTNAWR-AGNVKRD--C------------YACTV--PGSSGQKGMAISDRLSAQKKLLFGWDTEWE----------------------IDWNKNRFK------FGGKEMFFRLARDPRKKPQMVILSHDV----AHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 TIYLTFDDGP TPA+++ L +KATF+IN+ +L Q + L+ + GHV+A+HSYDHM HN + + NA D + +N+Y PV D ++ ++ +I + N+ + RLPYTN WR +G +K D C Y C P +S + G+ +S+ L+ + L+ GWD +W +D N K F D +++IL+HD A R +L FI LA +GY+F T+D Y Sbjct: 26 TIYLTFDDGPMNATPALIDTLDNAGIKATFYINAWHLDGIADENEDQALSALIQTLKSGHVVANHSYDHMVHNCVEEFGPTSGAECNATGDHQ--------INSYQDPVYDASMFSENLTVLESYIPNIQSYPNYKAASLARLPYTNGWRSSGELKGDGLCATSDDFKPWEPGYVCDAENPSNSSKAGVEVSNILADKGYLIHGWDLDWAPENWGIPYPANSLTEAEAFLGYVDAALNACAPVTINPVNSKTQTFPCG-DALHADKVIILTHDFLFEDAKRGQGATLNLPKLAKFIELALAAGYQFDTMDNY 328
BLAST of polysaccharide deacetylase vs. nr
Match: gi|1039427610|ref|WP_064792389.1| (dehydrogenase [Shewanella sp. Alg231_23]) HSP 1 Score: 105.916 bits (263), Expect = 1.479e-20 Identity = 91/312 (29.17%), Postives = 136/312 (43.59%), Query Frame = 0 Query: 524 TIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVADGHVLADHSYDHMAHN-------SKNSPKNAYKDVEEDLKYFGIMNTY--PVLDILWKAD----MKEFIGPV----NHTMSYYVRLPYTNAWR-AGNVKRD--C------------YACTV--PGSSGQKGMAISDRLSAQKKLLFGWDTEWE----------------------IDWNKNRFK------FGGKEMFFRLARDPRKKPQMVILSHDV----AHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 TIYLTFDDGP TPA+++ L +KATF+IN+ +L Q + L+ + GHV+A+HSYDHM HN + + NA D + +N+Y PV D ++ ++ +I + N+ + RLPYTN WR +G +K D C Y C P +S + G+ +S+ L+ + L+ GWD +W +D N K F D +++IL+HD A R +L FI LA +GY+F T+D Y Sbjct: 28 TIYLTFDDGPMNATPALIDTLDNAGIKATFYINAWHLDGIADENEDQALSALIQTLKSGHVVANHSYDHMVHNCVDEFGPTSGAECNATGDHQ--------INSYQDPVYDASMFSENLTVLESYIPNIQSYPNYKAASLARLPYTNGWRSSGELKGDGLCATSDDFKPWEPGYVCDAENPSNSSKAGVEVSNILADKGYLIHGWDLDWAPENWGIPYPANSLTEAEAFLGYVDAALNACAPVTINPVNSKTQTFPCG-DALHADKVIILTHDFLFEDAKRGQGASLNLPKLAKFIELALAAGYQFDTMDNY 330
BLAST of polysaccharide deacetylase vs. nr
Match: gi|1180181093|ref|WP_083700445.1| (dehydrogenase [Shewanella sp. UCD-KL12]) HSP 1 Score: 102.834 bits (255), Expect = 1.775e-19 Identity = 93/318 (29.25%), Postives = 136/318 (42.77%), Query Frame = 0 Query: 524 TIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNAN----NLLAIVADGHVLADHSYDHMAHNSK-----------NSPK----NAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPVNHTMSYYVRLPYTNAWR-AGNVKRD--C------------YAC--TVPGSSGQKGMAISDRLSAQKKLLFGWDTEWE-----IDWNKNRFKFGGKEMFFRLAR----------------------DPRKKPQMVILSHDVAHRPYEIRDEQR---------ELEDFIRLAKESGYKFATIDKY 769 TIYLTFDDGP TPA+++ L +KATF+IN+ +L +A +N + +LL + GHV+ +HSYDHM HN N+ N+Y+D D FG L+++ +A + N+ RLPYTN WR +G +K D C Y C P +S + +S+ L+ LL GWD +W I + N + + A D ++VIL+HD + D +R +L FI LAK +GY+F T+D Y Sbjct: 32 TIYLTFDDGPMNATPALIDTLDAAGIKATFYINAWHLDG----IADENEDLALVSLLQTLKSGHVIGNHSYDHMVHNCVEEFGPTSGADCNATGLHQINSYQDPVYDASMFG-----KNLEVI-QAYIPNIHSYPNYKADSLARLPYTNGWRSSGELKGDGLCATSDDFLPWEPGYVCDENNPSNSSSAAIQVSNILADSDYLLHGWDLDWAPENWGIAYPANSLTEAEAFLGYVDAALNACAPVTINPVNSKTHNFPCGDSLHADKVVILTHD-----FLFEDGKRGQGATLNLPKLSKFIELAKAAGYQFDTMDNY 334
BLAST of polysaccharide deacetylase vs. nr
Match: gi|655366706|ref|WP_028772756.1| (dehydrogenase [Shewanella waksmanii]) HSP 1 Score: 102.064 bits (253), Expect = 3.333e-19 Identity = 91/336 (27.08%), Postives = 138/336 (41.07%), Query Frame = 0 Query: 508 TAKSLEQYQLGEEDPV--TIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVADGHVLADHSYDHMAHN---------------SKNSPKNAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPV----NHTMSYYVRLPYTNAWR-AGNVKRD--C------------YAC--TVPGSSGQKGMAISDRLSAQKKLLFGWDTEWE-----IDWNKNRFKFGGKEMFFRLAR----------------------DPRKKPQMVILSHDVAHRPYEIRDEQR---------ELEDFIRLAKESGYKFATIDKY 769 TA +L +G+ + TIYLTFDDGP TPA+L+ L +KATF++N+ +L +L+ + GHV+ +HSYDHM HN + N N+Y+D D F T ++ +I + N+ RLPYTN WR +G +K D C Y C P +S + +S+ L+ + L+ GWD +W I + N + + A D +++IL+HD + D +R +L +FI LAK +GY F T+D Y Sbjct: 8 TALTLGLATMGQANAADKTIYLTFDDGPMNATPALLDTLNAGGIKATFYVNAWHLDGIGDENEDLALVSLINTLKGGHVVGNHSYDHMIHNCVEEFGPTSGADCNATGNHQINSYQDPVYDASMFDKNLTV----------LESYIPNIQSYPNYKGDTLARLPYTNGWRSSGELKGDGLCATSDDFKPWEPGYVCDPDNPSNSSAAAIEVSNILANKDYLIHGWDLDWAPENWGIAFPANSLTEASDMLAYVDAALNACAPVTINPINSKTHNFPCGDALHADKVIILTHD-----FLFEDGKRGQGATLNLPKLAEFIELAKAAGYAFDTMDNY 328
BLAST of polysaccharide deacetylase vs. nr
Match: gi|926601566|gb|KOY43356.1| (dehydrogenase [Vibrio parahaemolyticus]) HSP 1 Score: 97.8265 bits (242), Expect = 6.700e-18 Identity = 87/329 (26.44%), Postives = 136/329 (41.34%), Query Frame = 0 Query: 506 TYTAKSLEQYQLGEEDP-VTIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVADGHVLADHSYDHMAHN---------------SKNSPKNAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPVNHTMSYYVRLPYTNAWRAG-NVKRD--C------------YACTV--PGSSGQKGMAISDRLSAQKKLLFGWDTEWE----------------------IDWNKNRFK------FGGKEMFFRLARDPRKKPQMVILSHDV----AHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 T + +L QY + D TIYLTFDDGP + +++ L ++D+KATF+ N+ +L ++ L + GH++A+HSYDHM HN + + N+Y+D D F L +L K + N+ + + RLPYTN WR + K D C Y C + P +S + +A+ + L+ + GWD +W +D N K F P +++IL+H+ R +L +FIRLAK++GY F T+D Y Sbjct: 10 TLVSAALSQYSFAQTDSKGTIYLTFDDGPINASIDVIQVLNQEDIKATFYFNAWHLDGIGDENEDRSLEALKLALDTGHIVANHSYDHMVHNCVDEFGPNSAAECNATGDHQLNSYQDPVYDASMFT-----ENLSVLEKY-LPNITSYPNYKATEFARLPYTNGWRVTKDFKADGLCATSDDFKPWEPGYVCNINDPSNSVKASIAVQNILANKGYQTHGWDVDWAPENWGIAMPANSLTEAEPFLGYVDAALNNCAPTTINPINSKAQEFPCGT-PLHADKVIILTHEFLFEDGKRGMGATKNLPKLTEFIRLAKQAGYVFDTMDNY 331
BLAST of polysaccharide deacetylase vs. nr
Match: gi|1353471361|ref|WP_104974786.1| (dehydrogenase [Vibrio diabolicus] >gi|1347507105|gb|AVH27871.1| dehydrogenase [Vibrio diabolicus]) HSP 1 Score: 97.8265 bits (242), Expect = 7.012e-18 Identity = 89/328 (27.13%), Postives = 138/328 (42.07%), Query Frame = 0 Query: 506 TYTAKSLEQYQLGEEDP-VTIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVADGHVLADHSYDHMAHN---------------SKNSPKNAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPVNHTMSYYVRLPYTNAWRAG-NVKRD--C------------YACTV--PGSSGQKGMAISDRLSAQKKLLFGWDTEWE-IDWN----KNRFK----FGG--KEMFFRLA----------------RDPRKKPQMVILSHDV----AHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 T + +L QY + D TIYLTFDDGP + +++ L ++D+KATF+ N+ +L ++ L + GH++A+HSYDHM HN + + N+Y+D D F L +L K + N+ + + RLPYTN WR + K D C Y C + P +S + +A+ + L+ + GWD +W +W N F G E A P +++IL+H+ R +L +FIRLAK++GY F T+D Y Sbjct: 10 TLVSAALSQYSFAQTDSKGTIYLTFDDGPINASIDVIQVLNQEDIKATFYFNAWHLDGIGDENEDRSLEALKLALDTGHIVANHSYDHMVHNCVDEFGPNSAAECNATGDHQLNSYQDPVYDASMFT-----ENLSVLEKY-LPNITSYPNYKATEFARLPYTNGWRVTKDFKADGLCATSDDFKPWEPGYVCNINDPSNSVKASIAVQNILANKGYQTHGWDVDWAPENWGVAMPANSLTEAEPFLGYVDEALNNCAPTTINPINSKAQEFPCGTPLHADKVIILTHEFLFEDGKRGMGATKNLPKLAEFIRLAKQAGYVFDTMDNY 331
BLAST of polysaccharide deacetylase vs. nr
Match: gi|821600625|ref|WP_046873617.1| (MULTISPECIES: dehydrogenase [Vibrio harveyi group] >gi|822578779|gb|KLE24513.1| dehydrogenase [Vibrio alginolyticus] >gi|1345471856|gb|AVF58271.1| dehydrogenase [Vibrio diabolicus]) HSP 1 Score: 97.8265 bits (242), Expect = 7.206e-18 Identity = 87/329 (26.44%), Postives = 136/329 (41.34%), Query Frame = 0 Query: 506 TYTAKSLEQYQLGEEDP-VTIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVADGHVLADHSYDHMAHN---------------SKNSPKNAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPVNHTMSYYVRLPYTNAWRAG-NVKRD--C------------YACTV--PGSSGQKGMAISDRLSAQKKLLFGWDTEWE----------------------IDWNKNRFK------FGGKEMFFRLARDPRKKPQMVILSHDV----AHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 T + +L QY + D TIYLTFDDGP + +++ L ++D+KATF+ N+ +L ++ L + GH++A+HSYDHM HN + + N+Y+D D F L +L K + N+ + + RLPYTN WR + K D C Y C + P +S + +A+ + L+ + GWD +W +D N K F P +++IL+H+ R +L +FIRLAK++GY F T+D Y Sbjct: 10 TLVSAALSQYSFAQTDSKGTIYLTFDDGPINASIDVIQVLNQEDIKATFYFNAWHLDGIGDENEDRSLEALKLALDTGHIVANHSYDHMVHNCVDEFGPNSAAECNATGDHQLNSYQDPVYDASMFT-----ENLSVLEKY-LPNITSYPNYKATEFARLPYTNGWRVTKDFKADGLCATSDDFKPWEPGYVCNINDPSNSVKASIAVQNILANKGYQTHGWDVDWAPENWGIAMPANSLTEAEPFLGYVDAALNNCAPTTINPINSKAQEFPCGT-PLHADKVIILTHEFLFEDGKRGMGATKNLPKLAEFIRLAKQAGYVFDTMDNY 331
BLAST of polysaccharide deacetylase vs. nr
Match: gi|491539828|ref|WP_005397447.1| (MULTISPECIES: deacetylase DA1 [Vibrio harveyi group] >gi|451929757|gb|EMD77488.1| deacetylase DA1 [Vibrio alginolyticus E0666] >gi|1121695058|gb|OKQ14007.1| dehydrogenase [Vibrio antiquarius] >gi|1345500534|gb|AVF96179.1| dehydrogenase [Vibrio diabolicus]) HSP 1 Score: 97.4413 bits (241), Expect = 9.044e-18 Identity = 87/329 (26.44%), Postives = 136/329 (41.34%), Query Frame = 0 Query: 506 TYTAKSLEQYQLGEEDP-VTIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVADGHVLADHSYDHMAHN---------------SKNSPKNAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPVNHTMSYYVRLPYTNAWRAG-NVKRD--C------------YACTV--PGSSGQKGMAISDRLSAQKKLLFGWDTEWE----------------------IDWNKNRFK------FGGKEMFFRLARDPRKKPQMVILSHDV----AHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 T + +L QY + D TIYLTFDDGP + +++ L ++D+KATF+ N+ +L ++ L + GH++A+HSYDHM HN + + N+Y+D D F L +L K + N+ + + RLPYTN WR + K D C Y C + P +S + +A+ + L+ + GWD +W +D N K F P +++IL+H+ R +L +FIRLAK++GY F T+D Y Sbjct: 10 TLVSAALSQYSFAQTDSKGTIYLTFDDGPINASIDVIQVLNQEDIKATFYFNAWHLDGIGDENEDRSLEALKLALDTGHIVANHSYDHMVHNCVDEFGPNSAAECNATGDHQLNSYQDPVYDASMFT-----ENLSVLEKY-LPNITSYPNYKATEFARLPYTNGWRVTKDFKADGLCATSDDFKPWEAGYVCNINDPSNSVKASIAVQNILANKGYQTHGWDVDWAPENWGIAMPANSLTEAEPFLGYVDAALNNCAPTTINPINSKAQEFPCGT-PLHADKVIILTHEFLFEDGKRGMGATKNLPKLAEFIRLAKQAGYVFDTMDNY 331 The following BLAST results are available for this feature:
BLAST of polysaccharide deacetylase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of polysaccharide deacetylase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 1
BLAST of polysaccharide deacetylase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold22_size673200:455041..462405+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold22_size673200-snap-gene-4.22 ID=maker-scaffold22_size673200-snap-gene-4.22|Name=polysaccharide deacetylase|organism=Tigriopus kingsejongensis|type=gene|length=7365bp|location=Sequence derived from alignment at scaffold22_size673200:455041..462405+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'polysaccharide deacetylase' has the following synonyms
Add to Basket
|