polysaccharide deacetylase, maker-scaffold22_size673200-snap-gene-4.22 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of polysaccharide deacetylase vs. L. salmonis genes
Match: EMLSAG00000001215 (supercontig:LSalAtl2s:LSalAtl2s11:133136:134098:-1 gene:EMLSAG00000001215 transcript:EMLSAT00000001215 description:"maker-LSalAtl2s11-augustus-gene-1.16") HSP 1 Score: 213.386 bits (542), Expect = 8.466e-64 Identity = 118/285 (41.40%), Postives = 166/285 (58.25%), Query Frame = 0 Query: 497 CDWPEDVDCTYTAKSLEQYQLGEEDPVTIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIV----ADGHVLADHSYDHMAHNSKNSPKNAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPVNHTMSYYVRLPYTNAWR--AGN-----VKRDCYACTVPGSSGQKGMAISDRLSAQKKLLFGWDTEWEIDWNKNRFKFGGKEMFFRLAR-DPRKKPQMVILSHDVAHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 CDWPE VDC + ++ E+ V +YLTFDDGP+E T IL L++ +V TFF+NS+NL DPK L+ IV +GHV+ DHS+DHM H S S NAY VE+D +FG N P+L+ D+ EF N TM +Y+RLPYTN WR A N + DC +CT P +SG+ G+ +++ +++ GWDTEW +++ N++K+GG +MF RL P++ Q+VIL+HD + EL FI L K++GY F TI+ Y Sbjct: 4 CDWPEAVDCDIDIDKITSRKIKED--VLLYLTFDDGPSEETETILNVLKKHNVPGTFFVNSKNLFDPKMQ-----TKKLMDIVNRMSKEGHVVGDHSFDHMFHXSL-SVSNAYLSVEKDKTFFGKRNIMPILEST-DNDLIEF---TNFTMFHYIRLPYTNNWRVPAINEGQKPIVSDCVSCTTPRNSGELGIRLANEFYESGRVIMGWDTEWGMNFVTNKYKYGGLQMFTRLKHVRPKRSRQIVILTHDRG-----FTGDAEELSRFILLCKKTGYTFRTIENY 271
BLAST of polysaccharide deacetylase vs. SwissProt
Match: gi|75461936|sp|Q99PX1.1|DEAA_VIBAL (RecName: Full=Chitin disaccharide deacetylase; AltName: Full=Chitin oligosaccharide deacetylase; Flags: Precursor) HSP 1 Score: 91.2781 bits (225), Expect = 3.922e-18 Identity = 88/330 (26.67%), Postives = 134/330 (40.61%), Query Frame = 0 Query: 506 TYTAKSLEQYQLGEEDP-VTIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVAD-GHVLADHSYDHMAHN---------------SKNSPKNAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPVNHTMSYYVRLPYTNAWRAG-NVKRD--C------------YACTV--PGSSGQKGMAISDRLSAQKKLLFGWDTEWE----------------------IDWNKNRFK------FGGKEMFFRLARDPRKKPQMVILSHDV----AHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 T + +L QY + D TIYLTFDDGP + ++ L +++VKATF+ N+ +L D A L + D GH++A+HSYDHM HN + + N+Y+D D F L +L K + N+ + + RLPYTN WR + K D C Y+C P +S + +A+ + L+ GWD +W +D N K F P ++++L+H+ R +L FI+LAK++GY F T+D Y Sbjct: 10 TLVSAALSQYAFAQTDTKGTIYLTFDDGPINASIDVINVLNQEEVKATFYFNAWHL-DGIGDENEDRALEALKLALDSGHIVANHSYDHMVHNCVEEFGPNSAAECNATGDHQINSYQDPAYDASMFA-----ENLSVLEKY-LPNITSYPNYKANEFARLPYTNGWRVTKDFKADGLCATSDDLKPWEPGYSCDTANPSNSVKAAIAVQNILANNGYQTHGWDVDWAPENWGIAMPANSLTEAEPFLGYVDSALNTCAPTTINPINSKAQEFPCGT-PLHADKVIVLTHEFLFEDGKRGMGATQNLPKLAKFIQLAKQAGYVFDTMDNY 331
BLAST of polysaccharide deacetylase vs. nr
Match: gi|873925811|ref|WP_048626862.1| (dehydrogenase [Vibrio diabolicus] >gi|857609930|emb|CDU00784.1| Chitin disaccharide deacetylase [Vibrio diabolicus]) HSP 1 Score: 97.4413 bits (241), Expect = 1.055e-17 Identity = 87/329 (26.44%), Postives = 136/329 (41.34%), Query Frame = 0 Query: 506 TYTAKSLEQYQLGEEDP-VTIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVADGHVLADHSYDHMAHN---------------SKNSPKNAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPVNHTMSYYVRLPYTNAWRAG-NVKRD--C------------YACTV--PGSSGQKGMAISDRLSAQKKLLFGWDTEWE----------------------IDWNKNRFK------FGGKEMFFRLARDPRKKPQMVILSHDV----AHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 T + +L QY + D TIYLTFDDGP + +++ L ++D+KATF+ N+ +L ++ L + GH++A+HSYDHM HN + + N+Y+D D F L +L K + N+ + + RLPYTN WR + K D C Y C + P +S + +A+ + L+ + GWD +W +D N K F P +++IL+H+ R +L +FIRLAK++GY F T+D Y Sbjct: 10 TLVSAALSQYSFAQTDSKGTIYLTFDDGPINASIDVIQVLNQEDIKATFYFNAWHLDGIGDENEDRSLEALKLALDTGHIVANHSYDHMVHNCVDEFGPNSAAECNATGDHQLNSYQDPVYDASMFT-----ENLSVLEKY-LPNITSYPNYKATEFARLPYTNGWRVTKDFKADGLCATSDDFKPWEPGYVCDINAPSNSVKASIAVQNILANKGYQTHGWDVDWAPENWGIAMPANSLTEAEPFLGYVDAALNNCAPTTINPINSKAQEFPCGT-PLHADKVIILTHEFLFEDGKRGMGATKNLPKLAEFIRLAKQAGYVFDTMDNY 331
BLAST of polysaccharide deacetylase vs. nr
Match: gi|493794269|ref|WP_006742366.1| (dehydrogenase [Vibrio antiquarius] >gi|151938224|gb|EDN57064.1| deacetylase DA1 [Vibrio antiquarius] >gi|262336801|gb|ACY50596.1| deacetylase DA1 [Vibrio antiquarius]) HSP 1 Score: 97.4413 bits (241), Expect = 1.166e-17 Identity = 87/329 (26.44%), Postives = 136/329 (41.34%), Query Frame = 0 Query: 506 TYTAKSLEQYQLGEEDP-VTIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVADGHVLADHSYDHMAHN---------------SKNSPKNAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPVNHTMSYYVRLPYTNAWRAG-NVKRD--C------------YACTV--PGSSGQKGMAISDRLSAQKKLLFGWDTEWE----------------------IDWNKNRFK------FGGKEMFFRLARDPRKKPQMVILSHDV----AHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 T + +L QY + D TIYLTFDDGP + +++ L ++D+KATF+ N+ +L ++ L + GH++A+HSYDHM HN + + N+Y+D D F L +L K + N+ + + RLPYTN WR + K D C Y C + P +S + +A+ + L+ + GWD +W +D N K F P +++IL+H+ R +L +FIRLAK++GY F T+D Y Sbjct: 10 TLVSAALSQYSFAQTDSKGTIYLTFDDGPINASIDVIQVLNQEDIKATFYFNAWHLDGIGDENEDRSLEALKLALDTGHIVANHSYDHMVHNCVDEFGPNSAAECNATGDHQLNSYQDPVYDASMFT-----ENLSVLEKY-LPNITSYPNYKATEFARLPYTNGWRVTKDFKADGLCATSDDFKPWEPGYVCDINDPSNSVKASIAVQNILANKGYQTHGWDVDWAPENWGIAMPANSLTEAEPFLGYVDAALNNCAPTTINPINSKAQEFPCGT-PLHADKVIILTHEFLFEDGKRGMGATKNLPKLAEFIRLAKQAGYVFDTMDNY 331
BLAST of polysaccharide deacetylase vs. nr
Match: gi|635163035|dbj|GAJ78331.1| (deacetylase DA1 [Vibrio sp. JCM 18905]) HSP 1 Score: 97.4413 bits (241), Expect = 1.189e-17 Identity = 86/333 (25.83%), Postives = 138/333 (41.44%), Query Frame = 0 Query: 508 TAKSLEQYQLGEEDP-VTIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVADGHVLADHSYDHMAHN---------------SKNSPKNAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPVNHTMSYYVRLPYTNAWRAG-NVKRD--C------------YACTV--PGSSGQKGMAISDRLSAQKKLLFGWDTEWEIDWNKNRFKFGGKEM-------------FFRLARD---------------------PRKKPQMVILSHDV----AHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 + +L QY + D TIYLTFDDGP + +++ L ++D+KATF+ N+ +L ++ L + GH++A+HSYDHM HN + + N+Y+D D F L +L K + N+ + + RLPYTN WR + K D C Y C + P +S + +A+ + L+ + GWD +W + +GG M + A + P +++IL+H+ R +L +FIRLAK++GY F T+D Y Sbjct: 12 VSAALSQYSFAQTDSKGTIYLTFDDGPINASIDVIQVLNQEDIKATFYFNAWHLDGIGDENEDRSLEALKLALDTGHIVANHSYDHMVHNCVDEFGPNSAAECNATGDHQLNSYQDPVYDASMFT-----ENLSVLEKY-LPNITSYPNYKATEFARLPYTNGWRVTKDFKADGLCATSDDFKPWEPGYVCNINDPSNSVKASIAVQNILANKGYQTHGWDVDWAPE------NWGGIAMPANSLTEAEPFLGYVDAALNNCAPTTINPINSKAQEFPCGTPLHADKVIILTHEFLFEDGKRGMGATKNLPKLTEFIRLAKQAGYVFDTMDNY 332
BLAST of polysaccharide deacetylase vs. nr
Match: gi|1046473983|ref|WP_065646884.1| (dehydrogenase [Vibrio alginolyticus] >gi|1045786555|gb|OCH64636.1| dehydrogenase [Vibrio alginolyticus]) HSP 1 Score: 97.0561 bits (240), Expect = 1.325e-17 Identity = 87/329 (26.44%), Postives = 136/329 (41.34%), Query Frame = 0 Query: 506 TYTAKSLEQYQLGEEDP-VTIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVADGHVLADHSYDHMAHN---------------SKNSPKNAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPVNHTMSYYVRLPYTNAWRAG-NVKRD--C------------YACTV--PGSSGQKGMAISDRLSAQKKLLFGWDTEWE----------------------IDWNKNRFK------FGGKEMFFRLARDPRKKPQMVILSHDV----AHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 T + +L QY + D TIYLTFDDGP + +++ L ++D+KATF+ N+ +L ++ L + GH++A+HSYDHM HN + + N+Y+D D F L +L K + N+ + + RLPYTN WR + K D C Y C + P +S + +A+ + L+ + GWD +W +D N K F P +++IL+H+ R +L +FIRLAK++GY F T+D Y Sbjct: 10 TLVSAALSQYSFAQTDSKGTIYLTFDDGPINASIDVIQVLNQEDIKATFYFNAWHLDGIGDENEDRSLEALKLALDTGHIVANHSYDHMVHNCVDEFGPNSAAECNATGDHQLNSYQDPVYDASMFT-----ENLSVLEKY-LPNITSYPNYKATEFARLPYTNGWRVTKDFKADGLCATSDDFKPWETGYVCDINAPSNSVKASIAVQNILANKGYQTHGWDVDWAPENWGIAMPANSLTEAEPFLGYVDAALNNCAPTTINPINSKAQEFPCGT-PLHADKVIILTHEFLFEDGKRGMGATKNLPKLAEFIRLAKQAGYVFDTMDNY 331
BLAST of polysaccharide deacetylase vs. nr
Match: gi|684595168|dbj|GAL38286.1| (deacetylase DA1 [Vibrio maritimus]) HSP 1 Score: 95.9005 bits (237), Expect = 2.224e-17 Identity = 87/318 (27.36%), Postives = 129/318 (40.57%), Query Frame = 0 Query: 520 EDPVTIYLTFDDGPNEGTPAILEALRRQDVKATFFINSRNLHDPKAHVAAQNANNLLAIVADGHVLADHSYDHMAH-----NSKNSPK----------NAYKDVEEDLKYFGIMNTYPVLDILWKADMKEFIGPV----NHTMSYYVRLPYTNAWR-AGNVKRD--C------------YAC--TVPGSSGQKGMAISDRLSAQKKLLFGWDTEWE-----IDWNKNRFK-----------------------FGGKEMFFRLARDPRKKPQMVILSHDV----AHRPYEIRDEQRELEDFIRLAKESGYKFATIDKY 769 E TIYLTFDDGP + ++E L + +VK +FF N+ +L + LL + GH++ +HSYDHM H N +N+ N+Y+D D YF + A +++I + N+ + RLPYTN WR A + K D C Y C P +S M +SD L+ LFGWD +W I+ N K F P K ++++L+H+ HR +L+ F+ LA ++GY F T+D Y Sbjct: 23 EHKATIYLTFDDGPINASIKVIETLNKHNVKGSFFFNAWHLDGIGDENEDRALEALLLALNTGHMVGNHSYDHMVHNCDGLNGENTAAACNATGMHNVNSYRDPAYDYTYFPLN----------LAKFEQYIPNITSYPNYVADQFARLPYTNGWRVAKSFKADGLCATSDDYLPWDPNYVCDPDNPSNSSSNAMTLSDMLTNDSYQLFGWDLDWAPENWGIEMPANSLTEPEPFLAYVEASINSCAPVTIEPVNSKAQNFP-CDTPLHKDKVIVLTHEFLFEDGHRGMGETKNIPKLDKFLELALQAGYVFDTLDNY 329 The following BLAST results are available for this feature:
BLAST of polysaccharide deacetylase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of polysaccharide deacetylase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 1
BLAST of polysaccharide deacetylase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold22_size673200:455041..462405+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold22_size673200-snap-gene-4.22 ID=maker-scaffold22_size673200-snap-gene-4.22|Name=polysaccharide deacetylase|organism=Tigriopus kingsejongensis|type=gene|length=7365bp|location=Sequence derived from alignment at scaffold22_size673200:455041..462405+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'polysaccharide deacetylase' has the following synonyms
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