chitin binding peritrophin-, maker-scaffold241_size241811-snap-gene-1.14 (gene) Tigriopus kingsejongensis

Overview
Namechitin binding peritrophin-
Unique Namemaker-scaffold241_size241811-snap-gene-1.14
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of chitin binding peritrophin- vs. L. salmonis genes
Match: EMLSAG00000006636 (supercontig:LSalAtl2s:LSalAtl2s365:160926:165680:1 gene:EMLSAG00000006636 transcript:EMLSAT00000006636 description:"maker-LSalAtl2s365-augustus-gene-1.9")

HSP 1 Score: 132.109 bits (331), Expect = 5.489e-41
Identity = 59/125 (47.20%), Postives = 82/125 (65.60%), Query Frame = 0 
Query:    6 LLLICLGGGVWSQNCNPGPCSRIPGLVYNADLDQCAWPDEIGCSLNDLGYNTDCGSLNPFELKAVDFEVLGIPSDRTSDQYFLVCVPETTEDDRVSDRAYSTGPPVPRLLGCPRGHTFNPNTKVC 130
            +L++      + Q+C PG CS I G VY+  LDQCAWPDE+GC + DLG N +C   N +ELKA+  ++  +P +R   QYF+VC+P  TE+D++ +   +TGP  PRLLGCP  H F+PNT  C
Sbjct:    7 ILILFTIQATFGQSCQPGVCSSILGTVYDEVLDQCAWPDEVGCFVQDLGINENCDGYNAYELKALSSDIPNLPQNRYIQQYFVVCLPMLTEEDKLQEIPIATGPIAPRLLGCPEYHEFDPNTNTC 131
The following BLAST results are available for this feature:
BLAST of chitin binding peritrophin- vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000066365.489e-4147.20supercontig:LSalAtl2s:LSalAtl2s365:160926:165680:1... [more]
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BLAST of chitin binding peritrophin- vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of chitin binding peritrophin- vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold241_size241811supercontigscaffold241_size241811:127894..128447 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:chitin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold241_size241811-snap-gene-1.14-mRNA-1maker-scaffold241_size241811-snap-gene-1.14-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold241_size241811:127894..128447+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold241_size241811-snap-gene-1.14 ID=maker-scaffold241_size241811-snap-gene-1.14|Name=chitin binding peritrophin-|organism=Tigriopus kingsejongensis|type=gene|length=554bp|location=Sequence derived from alignment at scaffold241_size241811:127894..128447+ (Tigriopus kingsejongensis)
CAACTCCATCTCAGTCGATCAAGCTCAGTCATGGCAACAAAAGTGTTACT
GCTCATCTGCCTGGGAGGAGGAGGTAACTTGAGTCTGGCAACCAACTTGA
AGTAGCTTCTAGGACCACTTTGTTTCCAGTGTGGTCTCAGAATTGCAATC
CGGGACCGTGTTCCAGGATTCCAGGTTTGGTGTACAACGCTGATTTGGAC
CAATGTGCGTGGCCCGACGAGATAGGATGCTCGTTGAATGGTAATGTCGA
AGTCATCTGTTGACGATGACTGCAGTAAGTATCGCCTAATCAATGTCCAA
TTTTAGATCTGGGATATAATACCGATTGTGGCAGCCTCAACCCATTTGAA
CTCAAGGCCGTGGACTTTGAGGTCTTGGGCATTCCCTCTGATCGAACTTC
GGACCAATACTTCTTGGTGTGTGTTCCAGAAACCACCGAGGATGACCGTG
TGAGCGATCGAGCTTATTCCACTGGACCGCCTGTACCACGACTCCTAGGA
TGTCCCAGGGGACACACGTTTAACCCCAACACTAAAGTATGTGAAGAGTT
GTGA
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Synonyms
The feature 'chitin binding peritrophin-' has the following synonyms
Synonym
Tk11760
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