40s ribosomal protein sa, maker-scaffold291_size219542-snap-gene-1.21 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 40s ribosomal protein sa vs. L. salmonis genes
Match: EMLSAG00000001708 (supercontig:LSalAtl2s:LSalAtl2s1296:45801:46790:-1 gene:EMLSAG00000001708 transcript:EMLSAT00000001708 description:"augustus_masked-LSalAtl2s1296-processed-gene-0.1") HSP 1 Score: 388.267 bits (996), Expect = 2.885e-136 Identity = 187/250 (74.80%), Postives = 211/250 (84.40%), Query Frame = 0 Query: 8 GLTNGRLQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQESL------AQAASQVKPAEPENWGEDMNTDWSNE 251 GL +LQE DITKMLAAT+H+GSENSE TMEQYIFK+R DGVNII+++KTWEKL+L+ARAIAAIENPADV+ VSSR YGQRAVLKFARY+GAT IAGRFTPGAFTNQIQAA+REPRLLVVADPRADHQPVTE SYANIPII F NV P++ ID+ IP NNKS NS+GLMWWFLAREVLRLRGSISR++PW+VMPDLFFYRDPEEAEKEEQARQ+SL + E+W M+ DW+NE Sbjct: 4 GLDVLKLQEEDITKMLAATSHIGSENSEVTMEQYIFKRRPDGVNIIDLRKTWEKLMLSARAIAAIENPADVFVVSSRSYGQRAVLKFARYIGATPIAGRFTPGAFTNQIQAAFREPRLLVVADPRADHQPVTESSYANIPIIAFXNVXTPSRFIDMCIPCNNKSANSLGLMWWFLAREVLRLRGSISREIPWDVMPDLFFYRDPEEAEKEEQARQDSLAQAQAALATTAATNAPAQEDWETGMDNDWANE 253
BLAST of 40s ribosomal protein sa vs. L. salmonis genes
Match: EMLSAG00000007726 (supercontig:LSalAtl2s:LSalAtl2s44:350758:374181:1 gene:EMLSAG00000007726 transcript:EMLSAT00000007726 description:"maker-LSalAtl2s44-snap-gene-3.2") HSP 1 Score: 280.026 bits (715), Expect = 2.971e-94 Identity = 141/240 (58.75%), Postives = 168/240 (70.00%), Query Frame = 0 Query: 22 MLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQESLAQAASQVKPAEPENWGEDMNTDWSNEPAPGAAPAAG 261 MLAAT+ +GS+NSE TMEQYIFK++ D NII+++KTWEKL+L AR IA+IEN DV+ VSSR YGQR +LKF RY+ AT IAGRFTPG FTN IQAA+REPRLLVVADP NI II F NVD P++ ID IP NN S NS+GL+WWFL REVL LRGSISR++P +V+PDLFFY D EEAEKEEQARQ+ +VK EN D+ + + G G Sbjct: 1 MLAATSQIGSDNSEVTMEQYIFKRKPDWCNIIDLRKTWEKLMLFARTIASIENLTDVFVVSSRSYGQRTILKFXRYIRATPIAGRFTPGEFTNPIQAAFREPRLLVVADP------------PNISIIAFYNVDTPSRFIDTCIPCNNVSANSLGLIWWFLTREVLCLRGSISREIPCDVIPDLFFYGDLEEAEKEEQARQD-------KVKAIVEENIICDLTNKRTQQKFLGFDKIIG 221
BLAST of 40s ribosomal protein sa vs. SwissProt
Match: gi|122066029|sp|Q0PXX8.1|RSSA_DIACI (RecName: Full=40S ribosomal protein SA) HSP 1 Score: 342.813 bits (878), Expect = 3.530e-117 Identity = 173/292 (59.25%), Postives = 213/292 (72.95%), Query Frame = 0 Query: 8 GLTNGRLQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQESLAQAASQVKPAE-------PENWGEDMNTDWSNEPAPGAAPAAGGAAAAPAAAAPKFQVSEDWSAPVQPSDWAAE 292 GL L+E D+TKML A TH+GSENS+ MEQY++K+R+DGV+I+N+++TWEKLLLAARAI AIE+PADV+ +SSRP GQRAVLKFA Y GAT IAGRFTPGAFTNQIQAA+REPRLLVV DP DHQP+TE +Y NIP+I F N ++P + +D+ IP NNKSP+SIGLMWW LAREVLR RG+I R+ W+V+ DLFFYRDPEEAEKEEQA +ES A A KPA+ E+W + + P A +A APA A V++DW+ PV DW + Sbjct: 4 GLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGTIPREPKWDVVVDLFFYRDPEEAEKEEQAGKESAAAIAD--KPADEFAAHAPTESWNDTVVPSADLAPQSWAEESASIPQYAPAPQAAAAPVADDWTTPVGADDWGQD 293
BLAST of 40s ribosomal protein sa vs. SwissProt
Match: gi|122125804|sp|Q4KTE2.1|RSSA_SUBDO (RecName: Full=40S ribosomal protein SA) HSP 1 Score: 339.347 bits (869), Expect = 1.787e-115 Identity = 171/305 (56.07%), Postives = 212/305 (69.51%), Query Frame = 0 Query: 8 GLTNGRLQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQAR----QESLAQAASQV-KPA----EPENWGEDMNT----DWSNEP---AP---GAAPAAGGAAAAPAAAAPKFQVSEDWSAP-VQPSDWAAE 292 GL ++E D+TK+LAA TH+G N + M QY+FK + DGV IIN++KTWEKLLLAAR IAAIENPADV ++++P+GQRA+LKFA Y GA IAGRFTPG FTNQIQ A+REPRLL+V+D R+DHQP+TE +Y NIP+I F N ++P ++IDV IP NN NS+GLMWW L REVLRLRG+ISR++PWEVMPDLFFYRDPEE EKEEQA+ +E LA Q +PA +P+ W + M DW +EP AP G AP A PA +DWS P + DW A+ Sbjct: 4 GLEVLSMKEDDVTKLLAAGTHLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEKLLLAARVIAAIENPADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKAFREPRLLIVSDARSDHQPITEAAYVNIPVIAFCNTNSPLRYIDVAIPCNNMGKNSLGLMWWLLCREVLRLRGTISRELPWEVMPDLFFYRDPEEVEKEEQAKAEAERERLATDQWQTNQPAAPQQDPDQWADTMGVPSGGDWGDEPVTTAPVPTGGAPPVASTTATPATNTGSGFNQDDWSVPTTKTKDWGAD 308
BLAST of 40s ribosomal protein sa vs. SwissProt
Match: gi|82210121|sp|Q803F6.1|RSSA_DANRE (RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40) HSP 1 Score: 335.495 bits (859), Expect = 3.133e-114 Identity = 173/311 (55.63%), Postives = 212/311 (68.17%), Query Frame = 0 Query: 8 GLTNGRLQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQE-SLAQAASQVKPAEP-ENWGEDMNTDWSNEPAPGAAPAAGGAAA--APAAAAPKFQVSEDWSAPVQPSDWAAETPAAPAAPTPVDQANQWGGGNS 314 GL +++E D+ K LAA TH+G N + MEQY++K++SDGV IIN+KKTWEKLLLAARAI AIENPADV +SSR GQRAVLKFA G+T+ AGRFTPG FTNQIQAA+REPRLL+V DPRADHQP+TE SY NIP I N D+P +++D+ IP NNK P+S+GLMWW LAREVLR+RG+ISR+ PWEVMPDL+FYRDPEE EKEEQA E ++ + Q + P ++ + DWS + P A AP AP +EDWSA DW+A P QA WGG + Sbjct: 4 GLDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYVYKRKSDGVYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASATGSTTFAGRFTPGTFTNQIQAAFREPRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGPHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVGKEEFQGEWTAPVPDFNQPEVADWSEGVQVPSVPIQQFPAGIEAPGKPAPAEVYAEDWSAQPATEDWSA---------APTAQAGDWGGATA 305
BLAST of 40s ribosomal protein sa vs. SwissProt
Match: gi|229891613|sp|B3RPX6.1|RSSA_TRIAD (RecName: Full=40S ribosomal protein SA) HSP 1 Score: 330.872 bits (847), Expect = 1.143e-112 Identity = 170/313 (54.31%), Postives = 216/313 (69.01%), Query Frame = 0 Query: 8 GLTNGRLQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQESLAQAASQVKPAEPENWGEDMNTDWSNEPAPGAAPAAGGAAAAPAAAAPKFQVSEDWSA--PVQPSDWAAETPAAPAAPTPVDQ-ANQWGG--GNSW 315 GL RL D++KMLAA+ H+G+ N + MEQY+F++R+DGV+II++++TWEKLL+AAR IA+IENPADV +S+RPYGQRAVLKFA++ GA+ IAGRFTPG FTNQIQ AYREPRLL+V DPR DHQP+TE SY NIP+I F N D+ ++IDV IP NNK ++IGLMWW LAREVLRLRG+ISRD WE MPDLFFYRDPEE EKEEQA+ N W+ AP +PA +AA P++AAP E+WS+ + ++W A AA A + ++ +WG G W Sbjct: 4 GLDILRLTADDVSKMLAASAHLGTTNVDYQMEQYVFRRRTDGVHIIDLRQTWEKLLIAARIIASIENPADVCVLSARPYGQRAVLKFAKFTGASPIAGRFTPGTFTNQIQKAYREPRLLIVTDPRVDHQPITEASYVNIPVIAFCNTDSRLRYIDVGIPCNNKGAHAIGLMWWLLAREVLRLRGTISRDTDWEHMPDLFFYRDPEEVEKEEQAQ-----------------------NNKWA---APEQSPAL--SAAVPSSAAP----VEEWSSSPSKETTEWGASNTAAAAKSSWSNETGGEWGAQEGGEW 284
BLAST of 40s ribosomal protein sa vs. SwissProt
Match: gi|1710781|sp|P50890.1|RSSA_CHICK (RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40) HSP 1 Score: 330.102 bits (845), Expect = 3.196e-112 Identity = 173/313 (55.27%), Postives = 211/313 (67.41%), Query Frame = 0 Query: 8 GLTNGRLQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQESLAQAASQVKPAEPENWGEDMNTDWSNEPAP--GAAPAAGGAAAAPAAAAPKFQV----SEDWSAPVQPSDWAAETPAAPAAPTPVDQANQWGGGNS 314 GL +++E D+ K LAA TH+G N + MEQYI+K++SDG+ IIN+K+TWEKLLLAARAI AIENPADV +SSR GQRAVLKFA GAT IAGRFTPG FTNQIQAA+REPRLLVV DPRADHQP+TE SY NIP I N D+P +++D+ IP NNK +S+GLMWW LAREVLR+RG+ISR+ PWEVMPDL+FYRDPEE EKEEQA E +A ++ E+ T+W+ PAP A P A + P + +EDWSA DW+A P QA +W G + Sbjct: 4 GLDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAE---KAVTK----------EEFQTEWTA-PAPEFTAPPQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSA---------APTAQATEWVGTTT 293
BLAST of 40s ribosomal protein sa vs. SwissProt
Match: gi|229891612|sp|B5FXT6.1|RSSA_TAEGU (RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40) HSP 1 Score: 329.717 bits (844), Expect = 4.532e-112 Identity = 173/310 (55.81%), Postives = 210/310 (67.74%), Query Frame = 0 Query: 8 GLTNGRLQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQESLAQAASQVKPAEPENWGEDMNTDWSNEPAP--GAAPAAGGAAAAPAAAAPKFQV----SEDWSAPVQPSDWAAETPAAPAAPTPVDQANQWGG 311 GL +++E D+ K LAA TH+G N + MEQYI+K++SDG+ IIN+K+TWEKLLLAARAI AIENPADV +SSR GQRAVLKFA GAT IAGRFTPG FTNQIQAA+REPRLLVV DPRADHQP+TE SY NIP I N D+P +++D+ IP NNK +S+GLMWW LAREVLR+RG+ISR+ PWEVMPDL+FYRDPEE EKEEQA E +A ++ E+ T+W+ PAP A P A + P + +EDWSA DW+A P QA +W G Sbjct: 4 GLDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAE---KAVTK----------EEFQTEWTA-PAPEFTAPPQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSA---------APTAQATEWVG 290
BLAST of 40s ribosomal protein sa vs. SwissProt
Match: gi|730681|sp|P38983.3|RSSA_RAT (RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40) HSP 1 Score: 327.405 bits (838), Expect = 2.653e-111 Identity = 173/318 (54.40%), Postives = 211/318 (66.35%), Query Frame = 0 Query: 8 GLTNGRLQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQESLAQAASQVKPAEPENWGEDMNTDWSNEPAPGAAPAAGGAAAAPAAA--APKFQV---------SEDWSAPVQPSDWAAETPAAPAAPTPVDQANQWGGGNS 314 GL +++E D+ K LAA TH+G N + MEQYI+K++SDG+ IIN+K+TWEKLLLAARAI AIENPADV +SSR GQRAVLKFA GAT IAGRFTPG FTNQIQAA+REPRLLVV DPRADHQP+TE SY N+P I N D+P +++D+ IP NNK +S+GLMWW LAREVLR+RG+ISR+ PWEVMPDL+FYRDPEE EKEEQA E +A ++ E+ +W+ APA AA P A + QV +EDWSA DW+A P QA +W G + Sbjct: 4 GLDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAE---KAVTK----------EEFQGEWT-------APAPEFTAAQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSA---------APTAQATEWVGATT 292
BLAST of 40s ribosomal protein sa vs. SwissProt
Match: gi|82202482|sp|Q6P8D1.1|RSSA_XENTR (RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40) HSP 1 Score: 327.02 bits (837), Expect = 5.456e-111 Identity = 172/310 (55.48%), Postives = 210/310 (67.74%), Query Frame = 0 Query: 8 GLTNGRLQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQE-SLAQAASQVKPAEP-ENWGEDMNTDWSNEPAPGAAPAAGGAAAAPAAAAPKFQVSEDWSA-PVQPSDWAAETPAAPAAPTPVDQANQWGGGNS 314 GL +++E D+ K LAA TH+G N + MEQYI+K++SDG+ IIN+K+TWEKLLLAARAI AIENPADV +SSR GQRAVLKFA GAT IAGRFTPG FTNQIQAA+REPRLLVV DPRADHQP+TE SY NIP I N D+P +++D+ IP NNK +S+GLMWW LAREVLR+RG+ISR+ PWEVMPDL+FYRDPEE EKEEQA E + + Q + P + + DWS + P A P A K +EDWS+ P DW+A P QA++W G + Sbjct: 4 GLDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKATTKEEYQGEWTAPVAEFPQAEVADWSEGVQVPSVPIQQFPAERPEIPAAK-PAAEDWSSQPASTDDWSA---------APTAQASEWTGTTT 303
BLAST of 40s ribosomal protein sa vs. SwissProt
Match: gi|229891783|sp|Q7PZ81.3|RSSA_ANOGA (RecName: Full=40S ribosomal protein SA) HSP 1 Score: 326.25 bits (835), Expect = 5.627e-111 Identity = 163/276 (59.06%), Postives = 197/276 (71.38%), Query Frame = 0 Query: 14 LQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQES---LAQAASQVKPA-EPENWGEDM------------------NTDWSNEPAPGAAPAA---GGAA 264 L+E D+TKMLAATTH+GS + MEQY++K+R+DGV+IIN+ +T+EKLLLAAR IA+IE P +V+A+SSRPYGQRAVLK+A Y AT IAGRFTPGAFTNQIQ +REPRLL+V DP DHQPVTE SY NIP+I F N D+P K +D+ IP N KS +SIGLMWW LAREVLRLRG I+ D WEVMPDLFF+RDPEEAEKE+ A + + + +V A EP WGED+ N DW+ + AAP A GGAA Sbjct: 10 LKEDDVTKMLAATTHIGSTSVNFQMEQYVYKRRTDGVHIINLGRTYEKLLLAARCIASIEYPGEVFAISSRPYGQRAVLKYAHYTQATPIAGRFTPGAFTNQIQTTFREPRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPVKFVDIAIPCNTKSTHSIGLMWWMLAREVLRLRGKITHDR-WEVMPDLFFFRDPEEAEKEQAAIEAAAPVIKDVPDEVVVADEPTTWGEDVTQTAMAVPQAKPLAVAGANDDWNEDDTAPAAPGAASWGGAA 284
BLAST of 40s ribosomal protein sa vs. SwissProt
Match: gi|123918051|sp|Q3ZM03.1|RSSA_XENLA (RecName: Full=40S ribosomal protein SA; AltName: Full=37 kDa laminin receptor precursor; Short=37LRP; AltName: Full=37/67 kDa laminin receptor; Short=LRP/LR; AltName: Full=67 kDa laminin receptor; Short=67LR; AltName: Full=Laminin receptor 1; Short=LamR; AltName: Full=Laminin-binding protein precursor p40; Short=LBP/p40) HSP 1 Score: 327.02 bits (837), Expect = 7.167e-111 Identity = 171/318 (53.77%), Postives = 206/318 (64.78%), Query Frame = 0 Query: 8 GLTNGRLQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQESLAQA----------ASQVKPAEPENWGEDMNTDWSNEPAPGAAPAAGGAAAAPAAAAPKFQVSEDWSA-PVQPSDWAAETPAAPAAPTPVDQANQWGGGNS 314 GL +++E D+ K LAA TH+G N + MEQYI+K++SDG+ IIN+K+TWEKLLLAARAI AIENPADV +SSR GQRAVLKFA GAT IAGRFTPG FTNQIQAA+REPRLLVV DPRADHQP+TE SY NIP I N D+P +++D+ IP NNK +S+GLMWW LAREVLR+RG+ISR+ PWEVMPDL+FYRDPEE EKEEQA E ++ AE +W E + P A APK +EDWS P DW+A P QA++W G + Sbjct: 4 GLDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASASGATPIAGRFTPGTFTNQIQAAFREPRLLVVTDPRADHQPITEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKATTKEEFQGEWTAPVAEFPQAEVADWSEGVQ-------VPSVPIQQFTAERTDVPPAPK--PTEDWSTQPASTDDWSA---------APTAQASEWTGTTT 303
BLAST of 40s ribosomal protein sa vs. nr
Match: gi|198417001|ref|XP_002126356.1| (PREDICTED: 40S ribosomal protein SA-like [Ciona intestinalis]) HSP 1 Score: 337.035 bits (863), Expect = 1.846e-112 Identity = 158/253 (62.45%), Postives = 195/253 (77.08%), Query Frame = 0 Query: 8 GLTNGRLQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQESLAQAASQVKPAEPENWG-EDMNTDW---SNEPAPGA 256 G+ +L+E D+TKML+ATTH+G+ N + MEQY++K+R DGV IIN+KKTWEK++LAARAI AIENPAD+ +SSR YGQRA+LKFA GAT AGRFTPGAFTNQIQAA+REPRLL+V DPRADHQP+TE SY NIP+I N D+P +++D+ IP NNKS +S+GLMWW LAREVLRLRG+I R PW+VM DL+FYRD EE EK+EQ E Q +V+ +PE WG E + DW S +P PGA Sbjct: 4 GIEALQLKEDDVTKMLSATTHIGAPNCDFQMEQYVYKQRQDGVFIINLKKTWEKIMLAARAIVAIENPADICVISSRQYGQRAILKFASATGATPFAGRFTPGAFTNQIQAAFREPRLLIVTDPRADHQPITESSYVNIPLIALCNTDSPIRYVDICIPCNNKSKHSVGLMWWLLAREVLRLRGTIPRSQPWDVMCDLYFYRDAEEIEKDEQVAAEKEHQKELEVETTQPE-WGTEQVQQDWAESSIQPIPGA 255
BLAST of 40s ribosomal protein sa vs. nr
Match: gi|62955649|ref|NP_001017838.1| (uncharacterized protein LOC550536 [Danio rerio]) HSP 1 Score: 336.65 bits (862), Expect = 2.050e-112 Identity = 172/298 (57.72%), Postives = 212/298 (71.14%), Query Frame = 0 Query: 14 LQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQESLAQAASQVKPAEPENWGEDMNTDWSNEPAPGAAPAAGGAAAAPAAAAPKFQVSEDWSAPVQPSDWAAETPAAPAAPTPVDQANQWGG 311 L E DI KMLAA TH+GSENS+ M QY++K+ DGV+IIN+KKTWEKL+LAARAI AIENP++V+A+S+R GQRAVLK+++Y GAT IAGRFTPGAFTNQIQAA+REPRLLVVADP ADHQ + E SY NIP+I F +VD+P +++D+ IP N K+P+S+GLM+WFL REVLRLR ISRD PWE+MPD+FFYR PE+ +KEEQA+QE+L AA V+P E ++ + DWS E AP + A A AA E WSA DW A P WGG Sbjct: 7 LTEPDILKMLAAKTHIGSENSDFQMLQYVYKRCIDGVHIINLKKTWEKLVLAARAIVAIENPSEVFAISTRQQGQRAVLKYSKYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVADPLADHQSIVEASYVNIPVIAFCDVDSPLRYVDIAIPCNTKAPHSLGLMFWFLTREVLRLRAMISRDTPWEIMPDMFFYRAPEDVDKEEQAKQEAL--AAMPVRPIE-ADYSAPIAEDWSTEVAPTS--WADEATDFAQAAPVAPAAPEQWSAEPVTDDWTA----------PATTPGTWGG 289
BLAST of 40s ribosomal protein sa vs. nr
Match: gi|1129998487|ref|XP_019714075.1| (PREDICTED: 40S ribosomal protein SA isoform X2 [Hippocampus comes]) HSP 1 Score: 336.65 bits (862), Expect = 3.288e-112 Identity = 170/304 (55.92%), Postives = 208/304 (68.42%), Query Frame = 0 Query: 13 RLQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQE-SLAQAASQVKPAEP-ENWGEDMNTDWSNEPAPGAAPAAGGAAAAPAAAAPKFQVSEDWSAPVQPSDWAAETPAAPAAPTPVDQANQWGGGNS 314 +++E D+ K LAA TH+G N + MEQY++K++SDGV IIN++KTWEKLLLAARAI AIENPADV +SSR GQRAVLKFA G+T+ GRFTPG FTNQIQAA+REPRLL+V DPRADHQP+TE SY NIP I N D+P +++D+ IP NNK +S+GLMWW LAREVLR+RG+ISR+ PWEVMPDL+FYRDPEE EKEEQA E ++ + Q + P + + DWS A + P A APAA P SEDWS DW+ P QA+ WGG S Sbjct: 9 QMKEEDVLKFLAAGTHLGGTNLDFQMEQYVYKRKSDGVYIINLRKTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASATGSTTFHGRFTPGTFTNQIQAAFREPRLLIVTDPRADHQPLTEASYVNIPSIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVGKEEFQGEWTAPAAEFAQPEVADWSEGVAVPSVPIQQFPAGAPAAVKPTEVFSEDWSNQPATEDWST---------APTAQASDWGGATS 303
BLAST of 40s ribosomal protein sa vs. nr
Match: gi|225708482|gb|ACO10087.1| (40S ribosomal protein SA [Osmerus mordax]) HSP 1 Score: 336.265 bits (861), Expect = 4.947e-112 Identity = 174/314 (55.41%), Postives = 216/314 (68.79%), Query Frame = 0 Query: 8 GLTNGRLQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQE-SLAQAASQVKPAEPE-NWGEDMNTDWS-NEPAPGA----APAAGGAAAAPAAAAPKFQVSEDWSAPVQPSDWAAETPAAPAAPTPVDQANQWGGGNS 314 GL +++E D+ K LAA TH+G N + ME Y++K++ DGV IIN+KKTWEKLLLAARAI AIENPADV +SSR GQRAVLKFA G+T+ GRFTPG FTNQIQAA+REPRLL+V DPRADHQP+TE SY NIP I N D+P +++D+ IP NNK +S+GLMWW L+REVLR+RG+ISR+ PWEVMPDL+FYRDPEE EKEEQA E ++ + Q + P+ ++ + DWS P P PAAG A A A AA + SEDWSA DW+A P Q ++WGG +S Sbjct: 4 GLDVLQMKEEDVLKFLAAGTHLGGTNMDFQMEHYVYKRKCDGVYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRAVLKFASATGSTTFHGRFTPGTFTNQIQAAFREPRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDIAIPCNNKGHHSVGLMWWMLSREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVGKEEFQGEWTAPQADFAQPEVADWSEGVPVPSVPIQPFPAAGEGAPAKAPAATE-GFSEDWSAQTATEDWSA---------APTAQTSEWGGASS 307
BLAST of 40s ribosomal protein sa vs. nr
Match: gi|961931639|ref|XP_014864089.1| (PREDICTED: 40S ribosomal protein SA isoform X4 [Poecilia mexicana] >gi|962011825|ref|XP_014831459.1| PREDICTED: 40S ribosomal protein SA-like isoform X2 [Poecilia mexicana]) HSP 1 Score: 335.88 bits (860), Expect = 6.693e-112 Identity = 173/316 (54.75%), Postives = 207/316 (65.51%), Query Frame = 0 Query: 8 GLTNGRLQESDITKMLAATTHVGSENSETTMEQYIFKKRSDGVNIINMKKTWEKLLLAARAIAAIENPADVYAVSSRPYGQRAVLKFARYVGATSIAGRFTPGAFTNQIQAAYREPRLLVVADPRADHQPVTEGSYANIPIIGFANVDAPTKHIDVVIPGNNKSPNSIGLMWWFLAREVLRLRGSISRDMPWEVMPDLFFYRDPEEAEKEEQARQESLAQ--------AASQVKPAEPENWGEDMNTDWSNEPAPGAAPAAGG-AAAAPAAAAPKFQVSEDWSAPVQPSDWAAETPAAPAAPTPVDQANQWGGGNS 314 GL +++E D+ K LAA TH+G N + MEQY++K++SDG+ IIN+KKTWEKLLLAARAI AIENPADV +SSR GQR VLKFA GAT+ GRFTPG FTNQIQAA+REPRLL+V DPRADHQP+TE SY NIP I N D+P +++D IP NNK +S+GLMWW LAREVLR+RG+ISR+ PWEVMPDL+FYRDPEE EKEEQA E A Q + +PE TDWS A + P AAAAP + +EDWS DW+ P QA+ WGG S Sbjct: 4 GLDVLQMKEEDVLKFLAAGTHLGGMNLDFQMEQYVYKRKSDGIYIINLKKTWEKLLLAARAIVAIENPADVCVISSRNTGQRTVLKFASATGATTFHGRFTPGTFTNQIQAAFREPRLLIVTDPRADHQPLTEASYVNIPTIALCNTDSPLRYVDNAIPCNNKGHHSVGLMWWMLAREVLRMRGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVVKEEFQGEWTAPQAEFTQPE------VTDWSEGVAVPSVPIQQFPAAAAPVKTGETYTAAEDWSTQPATDDWST---------APTAQASDWGGTTS 304 The following BLAST results are available for this feature:
BLAST of 40s ribosomal protein sa vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of 40s ribosomal protein sa vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of 40s ribosomal protein sa vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold291_size219542:196539..201297+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold291_size219542-snap-gene-1.21 ID=maker-scaffold291_size219542-snap-gene-1.21|Name=40s ribosomal protein sa|organism=Tigriopus kingsejongensis|type=gene|length=4759bp|location=Sequence derived from alignment at scaffold291_size219542:196539..201297+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '40s ribosomal protein sa' has the following synonyms
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