serine-arginine protein 55, maker-scaffold329_size204955-snap-gene-1.19 (gene) Tigriopus kingsejongensis

Overview
Nameserine-arginine protein 55
Unique Namemaker-scaffold329_size204955-snap-gene-1.19
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of serine-arginine protein 55 vs. L. salmonis genes
Match: EMLSAG00000002605 (supercontig:LSalAtl2s:LSalAtl2s151:61867:66000:1 gene:EMLSAG00000002605 transcript:EMLSAT00000002605 description:"maker-LSalAtl2s151-augustus-gene-0.11")

HSP 1 Score: 175.637 bits (444), Expect = 1.032e-54
Identity = 99/217 (45.62%), Postives = 131/217 (60.37%), Query Frame = 0 
Query:    2 GREQRVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREE 218
            G   R+++GN+   TRERDVE+FFK +G++REV LK+GYGFVEF+D+R                   DA+DAV ++DGK++ G R+RVE ARS              PR    S    R  SRR           +  PPG RT YR+ VEN++ RTSWQDLKD+FRS G+ITY N H PR  +G+VEF  +R ++NALD  +D +L GRR+K+ EE
Sbjct:    3 GNHHRLYLGNISDDTRERDVEKFFKGYGKLREVALKNGYGFVEFEDHR-------------------DADDAVQDLDGKDMNGSRVRVEFARS--------------PREKRNS----RYQSRRSPPRGRRGPPMKRNPPGRRTQYRIRVENLSXRTSWQDLKDYFRSCGEITYTNAHKPRNNEGVVEFGDKRAMENALDRLDDTDLGGRRIKLYEE 182
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BLAST of serine-arginine protein 55 vs. L. salmonis genes
Match: EMLSAG00000007146 (supercontig:LSalAtl2s:LSalAtl2s402:743406:749121:1 gene:EMLSAG00000007146 transcript:EMLSAT00000007146 description:"maker-LSalAtl2s402-augustus-gene-7.14")

HSP 1 Score: 152.91 bits (385), Expect = 2.545e-44
Identity = 91/225 (40.44%), Postives = 127/225 (56.44%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSYGRDR---------------GSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKI 215
            RV++G +    RERDVE+  + +G++REV LK+GYGFVEFDDYR                   DA+DA ++++GKE +GER+ VELAR  P       G DR  R G+GS GR                 G   +YG             P  RT +RL+VEN++SR SWQDLKD+ R AG++TYA+ H  R+ +G VEFA+   L  A++  +  EL+GR++K+
Sbjct:   16 RVYMGGLSHRVRERDVEKLIRKYGKVREVSLKNGYGFVEFDDYR-------------------DADDACYDLNGKEFMGERVTVELARGTP------HGRDR-ERWGTGSTGRRERSPKRRRDSKSSSRPGWLDKYG-------------PPTRTDFRLVVENLSSRVSWQDLKDYMRQAGEVTYADAHKNRRNEGCVEFANEDDLKTAMEKLDGTELNGRKIKL 201
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BLAST of serine-arginine protein 55 vs. L. salmonis genes
Match: EMLSAG00000005475 (supercontig:LSalAtl2s:LSalAtl2s294:4530:9586:-1 gene:EMLSAG00000005475 transcript:EMLSAT00000005475 description:"maker-LSalAtl2s294-augustus-gene-0.9")

HSP 1 Score: 143.28 bits (360), Expect = 8.027e-41
Identity = 87/211 (41.23%), Postives = 123/211 (58.29%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHG-YGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKI 215
            RVF+GN+P   RERD+ERFF+ +GR+  + +K G YGF EFDDYR                   DA+DAV++++G EL  ER+ VE AR          GG R     SG  G   G  R            +  PP  RT YR+IVEN+++R SWQDLKD  R AG++T+A+ H+ ++ +G+VEF SRR ++ A+D  ++ EL GRR+++
Sbjct:   41 RVFLGNLPYSVRERDIERFFERYGRVYNIFIKSGKYGFCEFDDYR-------------------DADDAVYKLNGCELNSERITVEHAR----------GGRRAEGRSSGGSGGGGGGYRGDRYRGRGGGRGKYGPPT-RTNYRVIVENLSTRVSWQDLKDVMRRAGEVTFADAHNDKRNEGVVEFISRRDMERAIDKFDNHELHGRRIRL 221
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BLAST of serine-arginine protein 55 vs. L. salmonis genes
Match: EMLSAG00000009359 (supercontig:LSalAtl2s:LSalAtl2s599:215116:228556:-1 gene:EMLSAG00000009359 transcript:EMLSAT00000009359 description:"maker-LSalAtl2s599-augustus-gene-2.23")

HSP 1 Score: 95.1301 bits (235), Expect = 2.840e-22
Identity = 66/221 (29.86%), Postives = 98/221 (44.34%), Query Frame = 0 
Query:    3 REQRVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSYGRDRGSSRRYGGGRDDRD------NRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIRE 217
            R  RV VG +P  T   D+   F  +    ++ LK  + F+EFD +R                   DA+ AV  +DG    G R+ VE+AR              GPR              R+ GG +          R G P    T Y+++V+N+++R  WQDLKD  + AG +TYA  H     +G+V F++  G+  A+D   D +L GR+L + E
Sbjct:   36 RGCRVXVGXLPXDTSRSDIRDIFSKYRDRFDMKLKTRFAFIEFDYHR-------------------DADHAVDNLDGLTFRGRRISVEVAR--------------GPR---------TADKYRFKGGLNHEPVXATWVKRYGTPE--ITKYKILVKNLSTRIEWQDLKDLMKKAGTVTYALAHKNNMHEGMVCFSNEEGMLKAIDIFNDYDLCGRKLIVEE 212
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BLAST of serine-arginine protein 55 vs. L. salmonis genes
Match: EMLSAG00000008203 (supercontig:LSalAtl2s:LSalAtl2s495:117181:128694:1 gene:EMLSAG00000008203 transcript:EMLSAT00000008203 description:"augustus_masked-LSalAtl2s495-processed-gene-1.3")

HSP 1 Score: 85.8853 bits (211), Expect = 2.484e-20
Identity = 71/233 (30.47%), Postives = 106/233 (45.49%), Query Frame = 0 
Query:    1 MGREQRVFVGNVPSHTRERDVERFFKNFGRIREVVLKH----GYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSY--GRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRR-----LKIREERRGG 222
            M RE R++VGN+P   R +D+E  F  +G+I  + LK+     + FVEF+D+R                   DA+DAV+  DG +  G +LRVE  R   G      GG      G  S   GR+RG                  PP  R+ +R++V  +    SWQDLKD  R AGD+ +A+V+  + G G  E+     +  A+    D +          ++I+E+  GG
Sbjct:    1 MSRETRIYVGNLPPDIRTKDIEDLFYKYGKIVFIDLKNRRGPPFAFVEFEDHR-------------------DADDAVYARDGYDYDGYKLRVEFPRGGGGSFRGRSGGRGDGAXGGSSRDGGRNRG------------------PPTRRSQFRVVVSGLPPSGSWQDLKDHMREAGDVCFADVY--KDGTGACEYLRYEDMKYAIKKLNDTKFKSHEGETSYVRIKEDYGGG 194
[Close]
BLAST of serine-arginine protein 55 vs. L. salmonis genes
Match: EMLSAG00000003940 (supercontig:LSalAtl2s:LSalAtl2s211:7865:12537:1 gene:EMLSAG00000003940 transcript:EMLSAT00000003940 description:"maker-LSalAtl2s211-augustus-gene-0.12")

HSP 1 Score: 49.2914 bits (116), Expect = 4.459e-7
Identity = 26/85 (30.59%), Postives = 41/85 (48.24%), Query Frame = 0 
Query:  148 RLIVENVASRTSWQDLKDFFR-SAGDITYANVHSPRQ----GQGIVEFASRRGLDNALDNQEDIELDGRRLKIREERRGGRSNSG 227
            R+ + N      WQ++KD FR   GD+TY  + +  Q    G GI+EFA+       ++     E  GR+L ++E+    R   G
Sbjct:   44 RVFISNFPFEMKWQEIKDMFRKEVGDVTYVELFNDEQDRPRGXGIMEFATPDLAKKCIEKMHRFEYKGRKLVVKEDFDTLRDKCG 128
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BLAST of serine-arginine protein 55 vs. SwissProt
Match: gi|78099805|sp|P26686.4|SRR55_DROME (RecName: Full=Serine-arginine protein 55; Short=SRP55; AltName: Full=52 kDa bracketing protein; AltName: Full=B52 protein; AltName: Full=Protein enhancer of deformed)

HSP 1 Score: 170.244 bits (430), Expect = 1.817e-49
Identity = 97/213 (45.54%), Postives = 134/213 (62.91%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREE 218
            RV+VG +P   RERD+ERFFK +GR R++++K+GYGFVEF+DYR                   DA+DAV+E++GKELLGER+ VE AR      G+ RG +R          R  G  R     ++ R + R  PP  RT YRLIVEN++SR SWQDLKD+ R AG++TYA+ H  R+ +G+VEFAS   +  A++  +D EL+GRR+ + E+
Sbjct:    5 RVYVGGLPYGVRERDLERFFKGYGRTRDILIKNGYGFVEFEDYR-------------------DADDAVYELNGKELLGERVVVEPAR------GTARGSNRDRYDDRYGGRRGGGGGRYNEKNKNSRSSSRYGPPL-RTEYRLIVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFASLSDMKTAIEKLDDTELNGRRIHLVED 191
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BLAST of serine-arginine protein 55 vs. SwissProt
Match: gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE (RecName: Full=Serine/arginine-rich splicing factor 4; AltName: Full=Splicing factor, arginine/serine-rich 4)

HSP 1 Score: 165.236 bits (417), Expect = 1.146e-46
Identity = 96/216 (44.44%), Postives = 129/216 (59.72%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREERRG 221
            RV++G +    RERDVERFFK +G+I EV LK+GYGFVEFDD R                   DA+DAV+E++GK+L GER+ VE AR              GPR   GSYG  R     YG  R  RD      P  RT YRLIVEN++SR SWQDLKD+ R AG++TYA+ H  R+ +G++EF S   +  AL+  +  E++GR++++ E++ G
Sbjct:    3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLR-------------------DADDAVYELNGKDLCGERVIVEHAR--------------GPRR-DGSYGSGRSG---YGYRRSGRDK---YGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDKPG 178
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BLAST of serine-arginine protein 55 vs. SwissProt
Match: gi|20981726|sp|Q08170.2|SRSF4_HUMAN (RecName: Full=Serine/arginine-rich splicing factor 4; AltName: Full=Pre-mRNA-splicing factor SRP75; AltName: Full=SRP001LB; AltName: Full=Splicing factor, arginine/serine-rich 4)

HSP 1 Score: 163.696 bits (413), Expect = 5.616e-46
Identity = 95/214 (44.39%), Postives = 128/214 (59.81%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREER 219
            RV++G +    RERDVERFFK +G+I EV LK+GYGFVEFDD R                   DA+DAV+E++GK+L GER+ VE AR              GPR   GSYG  R     YG  R  RD      P  RT YRLIVEN++SR SWQDLKD+ R AG++TYA+ H  R+ +G++EF S   +  AL+  +  E++GR++++ E++
Sbjct:    3 RVYIGRLSYQARERDVERFFKGYGKILEVDLKNGYGFVEFDDLR-------------------DADDAVYELNGKDLCGERVIVEHAR--------------GPRR-DGSYGSGRSG---YGYRRSGRDK---YGPPTRTEYRLIVENLSSRCSWQDLKDYMRQAGEVTYADAHKGRKNEGVIEFVSYSDMKRALEKLDGTEVNGRKIRLVEDK 176
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BLAST of serine-arginine protein 55 vs. SwissProt
Match: gi|1168968|sp|Q09167.1|SRSF5_RAT (RecName: Full=Serine/arginine-rich splicing factor 5; AltName: Full=Delayed-early protein HRS; AltName: Full=Insulin-induced growth response protein CL-4; AltName: Full=Pre-mRNA-splicing factor SRP40; AltName: Full=Splicing factor, arginine/serine-rich 5 >gi|410516929|sp|O35326.2|SRSF5_MOUSE RecName: Full=Serine/arginine-rich splicing factor 5; AltName: Full=Delayed-early protein HRS; AltName: Full=Pre-mRNA-splicing factor SRP40; AltName: Full=Splicing factor, arginine/serine-rich 5)

HSP 1 Score: 151.369 bits (381), Expect = 1.901e-43
Identity = 97/212 (45.75%), Postives = 129/212 (60.85%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIRE 217
            RVF+G +    RE+DVERFFK +GRIR++ LK G+GFVEF+D R                   DA+DAV+E+DGKEL  ER+ +E AR+R   G              G Y  DR SSRR       R++RR  PP  RT  RLIVEN++SR SWQDLKDF R AG++T+A+ H P+  +G+VEFAS   L NA++     E++GR++K+ E
Sbjct:    5 RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPR-------------------DADDAVYELDGKELCSERVTIEHARARSRGGRG-----------RGRYS-DRFSSRR------PRNDRRNAPP-VRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIE 178
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BLAST of serine-arginine protein 55 vs. SwissProt
Match: gi|3929378|sp|Q13243.1|SRSF5_HUMAN (RecName: Full=Serine/arginine-rich splicing factor 5; AltName: Full=Delayed-early protein HRS; AltName: Full=Pre-mRNA-splicing factor SRP40; AltName: Full=Splicing factor, arginine/serine-rich 5)

HSP 1 Score: 151.369 bits (381), Expect = 2.057e-43
Identity = 97/212 (45.75%), Postives = 129/212 (60.85%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIRE 217
            RVF+G +    RE+DVERFFK +GRIR++ LK G+GFVEF+D R                   DA+DAV+E+DGKEL  ER+ +E AR+R   G              G Y  DR SSRR       R++RR  PP  RT  RLIVEN++SR SWQDLKDF R AG++T+A+ H P+  +G+VEFAS   L NA++     E++GR++K+ E
Sbjct:    5 RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPR-------------------DADDAVYELDGKELCSERVTIEHARARSRGGRG-----------RGRYS-DRFSSRR------PRNDRRNAPP-VRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIE 178
[Close]
BLAST of serine-arginine protein 55 vs. SwissProt
Match: gi|20981728|sp|Q13247.2|SRSF6_HUMAN (RecName: Full=Serine/arginine-rich splicing factor 6; AltName: Full=Pre-mRNA-splicing factor SRP55; AltName: Full=Splicing factor, arginine/serine-rich 6)

HSP 1 Score: 143.28 bits (360), Expect = 1.713e-39
Identity = 92/214 (42.99%), Postives = 127/214 (59.35%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREER 219
            RV++G +  + RE+D++RFF  +GR+ EV LK+GYGFVEF+D R                   DA+DAV+E++GKEL GER+ VE AR  P R   DR G        G     R +S     GRD    + G  P  RT YRLIVEN++SR SWQDLKDF R AG++TYA+ H  R  +G++EF S   +  ALD  +  E++GR +++ E++
Sbjct:    3 RVYIGRLSYNVREKDIQRFFSGYGRLLEVDLKNGYGFVEFEDSR-------------------DADDAVYELNGKELCGERVIVEHARG-PRR---DRDGYSYGSRSGGGGYSSRRTS-----GRD----KYG--PPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDK 182
[Close]
BLAST of serine-arginine protein 55 vs. SwissProt
Match: gi|123796822|sp|Q3TWW8.1|SRSF6_MOUSE (RecName: Full=Serine/arginine-rich splicing factor 6; AltName: Full=Pre-mRNA-splicing factor SRP55; AltName: Full=Splicing factor, arginine/serine-rich 6 >gi|614138921|sp|G3V6S8.1|SRSF6_RAT RecName: Full=Serine/arginine-rich splicing factor 6; AltName: Full=Pre-mRNA-splicing factor SRP55; AltName: Full=Splicing factor, arginine/serine-rich 6)

HSP 1 Score: 140.969 bits (354), Expect = 9.669e-39
Identity = 90/214 (42.06%), Postives = 126/214 (58.88%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREER 219
            RV++G +  + RE+D++RFF  +GR+ E+ LK+GYGFVEF+D R                   DA+DAV+E++ KEL GER+ VE AR  P R   DR G        G     R +S     GRD    + G  P  RT YRLIVEN++SR SWQDLKDF R AG++TYA+ H  R  +G++EF S   +  ALD  +  E++GR +++ E++
Sbjct:    3 RVYIGRLSYNVREKDIQRFFSGYGRLLEIDLKNGYGFVEFEDSR-------------------DADDAVYELNSKELCGERVIVEHARG-PRR---DRDGYSYGSRSGGGGYSSRRTS-----GRD----KYG--PPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDK 182
[Close]
BLAST of serine-arginine protein 55 vs. SwissProt
Match: gi|122145041|sp|Q3B7L6.1|SRSF6_BOVIN (RecName: Full=Serine/arginine-rich splicing factor 6; AltName: Full=Splicing factor, arginine/serine-rich 6)

HSP 1 Score: 137.887 bits (346), Expect = 2.017e-37
Identity = 89/214 (41.59%), Postives = 126/214 (58.88%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREER 219
            RV++G +  + RE+D++RFF  +GR+  + LK+GYGFVEF+D R                   DA+DAV+E++GKEL GER+ VE AR  P R   DR G        G     R +S     GRD    + G  P  RT +RLIVEN++SR SWQDLKDF R AG++TYA+ H  R  +G++EF S   +  ALD  +  E++GR +++ E++
Sbjct:    3 RVYIGRLSYNVREKDIQRFFSGYGRLLGIDLKNGYGFVEFEDSR-------------------DADDAVYELNGKELCGERVIVEHARG-PRR---DRDGYSYGSRSGGGGYSSRRTS-----GRD----KYG--PPVRTEFRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDK 182
[Close]
BLAST of serine-arginine protein 55 vs. SwissProt
Match: gi|56749459|sp|Q23120.1|RSP2_CAEEL (RecName: Full=Probable splicing factor, arginine/serine-rich 2; AltName: Full=CeSRp40; AltName: Full=RNA-binding protein srp-4)

HSP 1 Score: 127.487 bits (319), Expect = 3.808e-34
Identity = 79/216 (36.57%), Postives = 121/216 (56.02%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAG-DITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREERR 220
            RV++G +P+   +RDVE FF+ +G++ +V++K+G+GFV+F D R                   DA+DAVH+++GKEL GER+ +E  R + G            R GSG  GR+   + R GG R    NR   P   R  +RL+++N+++R SWQD+KD  R  G + TY+  H     Q IV F S   L +A++  +  +L+GR+LK  +E R
Sbjct:    3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQR-------------------DADDAVHDLNGKELCGERVILEFPRRKVGYNEE--------RSGSGFRGRE--PTFRKGGER-QFSNRYSRPCSTR--FRLVIDNLSTRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQAIVCFTSHDDLRDAMNKLQGEDLNGRKLKCTDETR 186
[Close]
BLAST of serine-arginine protein 55 vs. SwissProt
Match: gi|56749460|sp|Q23121.1|RSP1_CAEEL (RecName: Full=Probable splicing factor, arginine/serine-rich 1; AltName: Full=CeSRp75; AltName: Full=RNA-binding protein srp-5)

HSP 1 Score: 109.768 bits (273), Expect = 3.624e-27
Identity = 106/251 (42.23%), Postives = 148/251 (58.96%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSG---SYGRDRGSSR----RYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAG-DITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREERRGGRSNSGSRSRSRSRTPRSDGSRSRSRS 248
            R+++G + S   E+D+E FF+ +G+IR+V+LK+G+GFVEFDD R                   DAEDAVH+++GKEL GER  V L  S+P  GG DRGG  G   G     SY    G  R    RY  G   R++R G P    T +R++VEN++SR SWQDLKD  R  G + TYA  H  R  + ++ FA+   L   ++  + ++L+GR++K+ ++ + GRS S S SRSRSR+   D  RSRSRS
Sbjct:    4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKR-------------------DAEDAVHDLNGKELGGER--VILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESRYGRPYS--TRHRVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHK-RPNEALLCFATPSDLKRCIEKCDGMDLNGRKIKMIDDSQAGRSRSRSNSRSRSRSRSRDRRRSRSRS 230
[Close]
BLAST of serine-arginine protein 55 vs. nr
Match: gi|225712990|gb|ACO12341.1| (Serine-arginine protein 55 [Lepeophtheirus salmonis] >gi|290462763|gb|ADD24429.1| Serine-arginine protein 55 [Lepeophtheirus salmonis] >gi|290562097|gb|ADD38445.1| Serine-arginine protein 55 [Lepeophtheirus salmonis])

HSP 1 Score: 197.593 bits (501), Expect = 3.464e-59
Identity = 119/221 (53.85%), Postives = 148/221 (66.97%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREERRGGRSNS 226
            RV+VGN+P + RERDVE+ FK +GRIREVV+K GYGFVEFDD         PR          DA+D V++MDGKE  G R+RVE+AR    R G DR      RGG G     R +    G   +        PPGPRT YR+ V+N++SRTSWQDLKD+FR+AG+ITY N H+PRQG+G+VEFAS RGLD A+D+Q+++ELDGRRLK+ EE R  RS S
Sbjct:    6 RVYVGNLPENVRERDVEKLFKEYGRIREVVIKSGYGFVEFDD---------PR----------DADDVVNDMDGKEFQGGRVRVEMARDPRERRGRDRDRGYERRGGGGGGYDRRDTRGDRGRRGN--------PPGPRTNYRITVQNLSSRTSWQDLKDYFRAAGEITYTNAHTPRQGEGVVEFASSRGLDYAIDHQDELELDGRRLKVFEEHRRSRSGS 199
[Close]
BLAST of serine-arginine protein 55 vs. nr
Match: gi|225709420|gb|ACO10556.1| (Serine-arginine protein 55 [Caligus rogercresseyi])

HSP 1 Score: 196.438 bits (498), Expect = 8.169e-59
Identity = 113/213 (53.05%), Postives = 141/213 (66.20%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGSGSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREE 218
            RV++GN+P + RERDVE+F K+ GRIREVV+K GYGFVEFDD         PR          DA+D V++MDGK+  G R+RVE+AR    R   DRG DR      G     R  +                PPGP+T YR++VEN++SRTSWQDLKD+FR+AGDITY N H+PRQG+GIVEFAS +GLD ALD+Q ++ELDGRRLK+ EE
Sbjct:    6 RVYIGNLPENVRERDVEKFLKDHGRIREVVIKSGYGFVEFDD---------PR----------DADDVVNDMDGKDFQGGRIRVEMARDPRDRRDRDRGSDRRGGFDRGRDRGGRRGN----------------PPGPKTNYRVVVENLSSRTSWQDLKDYFRAAGDITYTNAHTPRQGEGIVEFASSKGLDYALDHQNELELDGRRLKVYEE 183
[Close]
BLAST of serine-arginine protein 55 vs. nr
Match: gi|815800393|ref|XP_012220851.1| (PREDICTED: serine-arginine protein 55 isoform X9 [Linepithema humile])

HSP 1 Score: 186.808 bits (473), Expect = 8.821e-54
Identity = 107/215 (49.77%), Postives = 142/215 (66.05%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGS-GSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREER 219
            RV+VG +P  TRERD+ERFF+ +GR R+V++K+GYGFVEFDDYR                   DA+DAV+E++GKELLGER+ VE AR  P      RG D+   G S G YG  R S+R      DD  + R  PP  RT YRL VEN++SR SWQDLKD+ RSAG++TYA+ H  R+ +G+VEFA+   L NA+D  +D EL+GRR+++ E++
Sbjct:    5 RVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYR-------------------DADDAVYELNGKELLGERITVERARGTP------RGSDQWRYGDSRGGYGDSRRSAR------DDMRHDRYGPP-TRTEYRLTVENLSSRVSWQDLKDYMRSAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTELNGRRIRLIEDK 187
[Close]
BLAST of serine-arginine protein 55 vs. nr
Match: gi|805758194|ref|XP_012148291.1| (PREDICTED: serine-arginine protein 55 isoform X10 [Megachile rotundata])

HSP 1 Score: 186.808 bits (473), Expect = 1.114e-53
Identity = 107/215 (49.77%), Postives = 142/215 (66.05%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGS-GSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREER 219
            RV+VG +P  TRERD+ERFF+ +GR R+V++K+GYGFVEFDDYR                   DA+DAV+E++GKELLGER+ VE AR  P      RG D+   G S G YG  R S+R      DD  + R  PP  RT YRLIVEN++SR SWQDLKD+ R AG++TYA+ H  R+ +G+VEFA+   L NA+D  +D EL+GRR+++ E++
Sbjct:    5 RVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYR-------------------DADDAVYELNGKELLGERITVERARGTP------RGSDQWRYGDSRGGYGDSRRSAR------DDMRHDRYGPP-TRTEYRLIVENLSSRVSWQDLKDYMRHAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTELNGRRIRLIEDK 187
[Close]
BLAST of serine-arginine protein 55 vs. nr
Match: gi|815800391|ref|XP_012220850.1| (PREDICTED: serine-arginine protein 55 isoform X8 [Linepithema humile])

HSP 1 Score: 184.882 bits (468), Expect = 1.721e-53
Identity = 108/229 (47.16%), Postives = 146/229 (63.76%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGS-GSYGRDRGSSRRYGGGRDDRDN-----------RRGVP---PGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREER 219
            RV+VG +P  TRERD+ERFF+ +GR R+V++K+GYGFVEFDDYR                   DA+DAV+E++GKELLGER+ VE AR  P      RG D+   G S G YG  R S+R     R DRD+           ++ +P   P  RT YRL VEN++SR SWQDLKD+ RSAG++TYA+ H  R+ +G+VEFA+   L NA+D  +D EL+GRR+++ E++
Sbjct:    5 RVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYR-------------------DADDAVYELNGKELLGERITVERARGTP------RGSDQWRYGDSRGGYGDSRRSAR--DDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRSAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTELNGRRIRLIEDK 206
[Close]
BLAST of serine-arginine protein 55 vs. nr
Match: gi|820842236|ref|XP_012339430.1| (PREDICTED: serine-arginine protein 55 isoform X5 [Apis florea])

HSP 1 Score: 186.037 bits (471), Expect = 2.201e-53
Identity = 106/215 (49.30%), Postives = 141/215 (65.58%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGS-GSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREER 219
            RV+VG +P  TRERD+ERFF+ +GR R+V++K+GYGFVEFDDYR                   DA+DAV+E++GKELLGER+ VE AR  P      RG D+   G S G YG  R S+R      DD  + R  PP  RT YRL VEN++SR SWQDLKD+ R AG++TYA+ H  R+ +G+VEFA+   L NA+D  +D EL+GRR+++ E++
Sbjct:    5 RVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYR-------------------DADDAVYELNGKELLGERITVERARGTP------RGSDQWRYGDSRGGYGDSRRSAR------DDMRHDRYGPP-TRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTELNGRRIRLIEDK 187
[Close]
BLAST of serine-arginine protein 55 vs. nr
Match: gi|815800379|ref|XP_012220844.1| (PREDICTED: serine-arginine protein 55 isoform X4 [Linepithema humile])

HSP 1 Score: 184.882 bits (468), Expect = 2.518e-53
Identity = 108/229 (47.16%), Postives = 146/229 (63.76%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGS-GSYGRDRGSSRRYGGGRDDRDN-----------RRGVP---PGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREER 219
            RV+VG +P  TRERD+ERFF+ +GR R+V++K+GYGFVEFDDYR                   DA+DAV+E++GKELLGER+ VE AR  P      RG D+   G S G YG  R S+R     R DRD+           ++ +P   P  RT YRL VEN++SR SWQDLKD+ RSAG++TYA+ H  R+ +G+VEFA+   L NA+D  +D EL+GRR+++ E++
Sbjct:    5 RVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYR-------------------DADDAVYELNGKELLGERITVERARGTP------RGSDQWRYGDSRGGYGDSRRSAR--DDMRHDRDSVNRNTRTASSYKQSLPRYGPPTRTEYRLTVENLSSRVSWQDLKDYMRSAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTELNGRRIRLIEDK 206
[Close]
BLAST of serine-arginine protein 55 vs. nr
Match: gi|1153833276|ref|XP_020293235.1| (serine-arginine protein 55 isoform X5 [Pseudomyrmex gracilis])

HSP 1 Score: 185.652 bits (470), Expect = 2.667e-53
Identity = 106/215 (49.30%), Postives = 141/215 (65.58%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGS-GSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREER 219
            RV+VG +P  TRERD+ERFF+ +GR R+V++K+GYGFVEFDDYR                   DA+DAV+E++GKELLGER+ VE AR  P      RG D+   G S G YG  R S+R      DD  + R  PP  RT YRL VEN++SR SWQDLKD+ R AG++TYA+ H  R+ +G+VEFA+   L NA+D  +D EL+GRR+++ E++
Sbjct:    5 RVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYR-------------------DADDAVYELNGKELLGERITVERARGTP------RGSDQWRYGDSRGGYGDSRRSAR------DDMRHDRYGPP-TRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTELNGRRIRLIEDK 187
[Close]
BLAST of serine-arginine protein 55 vs. nr
Match: gi|571560141|ref|XP_006566503.1| (PREDICTED: serine-arginine protein 55 isoform X13 [Apis mellifera] >gi|572273823|ref|XP_006614344.1| PREDICTED: serine/arginine-rich splicing factor 4-like isoform X20 [Apis dorsata] >gi|820842258|ref|XP_012339441.1| PREDICTED: serine-arginine protein 55 isoform X16 [Apis florea] >gi|1035600881|ref|XP_016907874.1| PREDICTED: serine-arginine protein 55 isoform X11 [Apis cerana])

HSP 1 Score: 186.037 bits (471), Expect = 2.847e-53
Identity = 106/215 (49.30%), Postives = 141/215 (65.58%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGS-GSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREER 219
            RV+VG +P  TRERD+ERFF+ +GR R+V++K+GYGFVEFDDYR                   DA+DAV+E++GKELLGER+ VE AR  P      RG D+   G S G YG  R S+R      DD  + R  PP  RT YRL VEN++SR SWQDLKD+ R AG++TYA+ H  R+ +G+VEFA+   L NA+D  +D EL+GRR+++ E++
Sbjct:    5 RVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYR-------------------DADDAVYELNGKELLGERITVERARGTP------RGSDQWRYGDSRGGYGDSRRSAR------DDMRHDRYGPP-TRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTELNGRRIRLIEDK 187
[Close]
BLAST of serine-arginine protein 55 vs. nr
Match: gi|780628217|ref|XP_011684839.1| (PREDICTED: serine-arginine protein 55 isoform X8 [Wasmannia auropunctata])

HSP 1 Score: 185.652 bits (470), Expect = 3.133e-53
Identity = 106/215 (49.30%), Postives = 141/215 (65.58%), Query Frame = 0 
Query:    6 RVFVGNVPSHTRERDVERFFKNFGRIREVVLKHGYGFVEFDDYRRTEIEGGPRRVFINRSICSDAEDAVHEMDGKELLGERLRVELARSRPGRGGSDRGGDRGPRGGS-GSYGRDRGSSRRYGGGRDDRDNRRGVPPGPRTGYRLIVENVASRTSWQDLKDFFRSAGDITYANVHSPRQGQGIVEFASRRGLDNALDNQEDIELDGRRLKIREER 219
            RV+VG +P  TRERD+ERFF+ +GR R+V++K+GYGFVEFDDYR                   DA+DAV+E++GKELLGER+ VE AR  P      RG D+   G S G YG  R S+R      DD  + R  PP  RT YRL VEN++SR SWQDLKD+ R AG++TYA+ H  R+ +G+VEFA+   L NA+D  +D EL+GRR+++ E++
Sbjct:    5 RVYVGGLPYGTRERDLERFFRGYGRFRDVLIKNGYGFVEFDDYR-------------------DADDAVYELNGKELLGERITVERARGTP------RGSDQWRYGDSRGGYGDSRRSAR------DDMRHDRYGPP-TRTEYRLTVENLSSRVSWQDLKDYMRQAGEVTYADAHKQRRNEGVVEFATYSDLKNAIDKLDDTELNGRRIRLIEDK 187
The following BLAST results are available for this feature:
BLAST of serine-arginine protein 55 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 6
Match NameE-valueIdentityDescription
EMLSAG000000026051.032e-5445.62supercontig:LSalAtl2s:LSalAtl2s151:61867:66000:1 g... [more]
EMLSAG000000071462.545e-4440.44supercontig:LSalAtl2s:LSalAtl2s402:743406:749121:1... [more]
EMLSAG000000054758.027e-4141.23supercontig:LSalAtl2s:LSalAtl2s294:4530:9586:-1 ge... [more]
EMLSAG000000093592.840e-2229.86supercontig:LSalAtl2s:LSalAtl2s599:215116:228556:-... [more]
EMLSAG000000082032.484e-2030.47supercontig:LSalAtl2s:LSalAtl2s495:117181:128694:1... [more]
EMLSAG000000039404.459e-730.59supercontig:LSalAtl2s:LSalAtl2s211:7865:12537:1 ge... [more]
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BLAST of serine-arginine protein 55 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
gi|78099805|sp|P26686.4|SRR55_DROME1.817e-4945.54RecName: Full=Serine-arginine protein 55; Short=SR... [more]
gi|20978758|sp|Q8VE97.1|SRSF4_MOUSE1.146e-4644.44RecName: Full=Serine/arginine-rich splicing factor... [more]
gi|20981726|sp|Q08170.2|SRSF4_HUMAN5.616e-4644.39RecName: Full=Serine/arginine-rich splicing factor... [more]
gi|1168968|sp|Q09167.1|SRSF5_RAT1.901e-4345.75RecName: Full=Serine/arginine-rich splicing factor... [more]
gi|3929378|sp|Q13243.1|SRSF5_HUMAN2.057e-4345.75RecName: Full=Serine/arginine-rich splicing factor... [more]
gi|20981728|sp|Q13247.2|SRSF6_HUMAN1.713e-3942.99RecName: Full=Serine/arginine-rich splicing factor... [more]
gi|123796822|sp|Q3TWW8.1|SRSF6_MOUSE9.669e-3942.06RecName: Full=Serine/arginine-rich splicing factor... [more]
gi|122145041|sp|Q3B7L6.1|SRSF6_BOVIN2.017e-3741.59RecName: Full=Serine/arginine-rich splicing factor... [more]
gi|56749459|sp|Q23120.1|RSP2_CAEEL3.808e-3436.57RecName: Full=Probable splicing factor, arginine/s... [more]
gi|56749460|sp|Q23121.1|RSP1_CAEEL3.624e-2742.23RecName: Full=Probable splicing factor, arginine/s... [more]

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BLAST of serine-arginine protein 55 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|225712990|gb|ACO12341.1|3.464e-5953.85Serine-arginine protein 55 [Lepeophtheirus salmoni... [more]
gi|225709420|gb|ACO10556.1|8.169e-5953.05Serine-arginine protein 55 [Caligus rogercresseyi][more]
gi|815800393|ref|XP_012220851.1|8.821e-5449.77PREDICTED: serine-arginine protein 55 isoform X9 [... [more]
gi|805758194|ref|XP_012148291.1|1.114e-5349.77PREDICTED: serine-arginine protein 55 isoform X10 ... [more]
gi|815800391|ref|XP_012220850.1|1.721e-5347.16PREDICTED: serine-arginine protein 55 isoform X8 [... [more]
gi|820842236|ref|XP_012339430.1|2.201e-5349.30PREDICTED: serine-arginine protein 55 isoform X5 [... [more]
gi|815800379|ref|XP_012220844.1|2.518e-5347.16PREDICTED: serine-arginine protein 55 isoform X4 [... [more]
gi|1153833276|ref|XP_020293235.1|2.667e-5349.30serine-arginine protein 55 isoform X5 [Pseudomyrme... [more]
gi|571560141|ref|XP_006566503.1|2.847e-5349.30PREDICTED: serine-arginine protein 55 isoform X13 ... [more]
gi|780628217|ref|XP_011684839.1|3.133e-5349.30PREDICTED: serine-arginine protein 55 isoform X8 [... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold329_size204955supercontigscaffold329_size204955:124354..126902 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
NoteF:nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold329_size204955-snap-gene-1.19-mRNA-1maker-scaffold329_size204955-snap-gene-1.19-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold329_size204955:124354..126902+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold329_size204955-snap-gene-1.19 ID=maker-scaffold329_size204955-snap-gene-1.19|Name=serine-arginine protein 55|organism=Tigriopus kingsejongensis|type=gene|length=2549bp|location=Sequence derived from alignment at scaffold329_size204955:124354..126902+ (Tigriopus kingsejongensis)
CTCGATCTGCCTCCTTCGTTTGTGTGCGATCTGACGCTCCGACTCGCTCT
CTTGCGCGATCCTTGCAGCCCGTTTGTGGCTTTCGGCCGCGCTTCGCTCA
GCCAAGGCCCGACCAACACCAACGTCGGCCACTGGCCAACTGCGAAGCTC
AATCGACACCTCCATTTTGAGCCGTATCCAGGGGAAATATTCGCCGAGCC
ACCACCATGGGCCGGGAGCAACGCGTGTTTGTGGGCAATGTGCCCAGCCA
CACCCGGGAGCGAGACGTGGAGCGCTTCTTCAAGAACTTTGGCCGGATCC
GCGAGGTCGTGCTCAAGCACGGCTACGGTTTCGTAGAATTCGACGACTAC
CGGTAATTATGCCCCCGGCCATCACTGAATCCCCCCCCTCCATTAAACGC
CCCTGCCCCATGATTTGGTCCCGGAACACGGGGGGATACATTGAGTGCCC
GGGACCAGTCGCCCGCATGGGCCATTAGCCTTAGCATTGGGCCCGGGAAA
CGTGTAGCCGGGTGTATGGCATTTAAGGCATTGTGGCCCTACCGTGGGAA
GTAATCGGCTACCTGATCCTGCACTGGTTTGGCATCGCCAGGTCGCTTTA
TGACCTCGCGCCAGACTTTTCAATAGCTTCTACCCCCATAATTGGTCCTA
TGTCACGCCTAGATCCAAGCATCCGCCATGCTGTTGGCCAAAAGGCCCAG
TAGCCAACTCTGGAGCTTATCTGGATCCCCGGCTGCTCTCTTGGCACAGA
TTTCTACTTTTATATTAACAACACATATATGACAACGGAGAGCCCAATAT
ACATTACCAAAGAATAGCCGTGAACCAGAGACCAGCAGTATGGAGACTTT
AGCCCCCCCCCCCCCGGCACCTAGTCATCATTTTCCCTTGGGACGCCCCT
ATGGACCCCTCCGAGGATCTAGCTCGGTTTGCGAGATCCGCCCGCTCCTA
GGATTGGGTGCCCCTCCCGGCCCGGTTGTGTTGATGAGCCCACCCTGGAC
AAGGTTGCTAATTTATGTTTTCTCCCACCGTTGACCGGCTAGTATTTGAT
GTGATTCTACATATTTTATAGTGTCTGTTAATCTGAGCGAGTGGGTGGCG
TGTCTTGTCCACTCCCCCGAGCAGGATCACGCTCGGCGGCATTGGGCCTA
GCGACTCTGGGTCTCGCTCGAGCTTGGCCTTTGCACCCGTTGGGCATCGA
TCCGGACAACAGAAAGCACTGTGTGTCGAGTCACTCCCGGGGCGATATCA
ATCGATCATGAAATCTCGTTTTCTCGCTCGCATGGAGGGGTTAATTGTCC
GGAATATCCGTGGTTTCTTTTGAGTGGATCAGTCGCACCGAGATCGAGGG
TGGCCCCAGACGCGTCTTCATAAATCGATCAATTTGCAGTGATGCCGAGG
ATGCGGTCCACGAGATGGACGGAAAGGAGCTCTTGGGCGAGCGCCTCCGT
GTGGAGTTGGCCAGGTCGCGACCTGGCCGAGGTGGCAGTGATCGCGGAGG
CGATCGCGGACCTCGTGGCGGAAGCGGAAGCTACGGCCGAGACCGAGGCT
CTAGCCGCCGCTACGGGGGAGGCCGGGATGATCGGGACAATCGGCGTGGA
GTGCCACCGGGTCCCAGGACTGGCTACAGGTTGATTGTCGAGAACGTGGC
GTCTCGCACATCATGGCAGGTAATGTGACTATCGGGATCTTTACATCGTG
AACCTCACCCAGGACCCGATATCCAGGGGACATGCAAATGAATATGATTT
CGTATCTCAATTCCTACCATTGATTATTTGAATGACCCGAAAATCGATTG
TGCCCACCTTTTCTCTAATTGTCAAATCCCCGAAGTTTCCGTGTGGGAAA
TACAACTTGGAACTTTTTCCCCGATTCTGCAACTTTCGGTCAAAATGCTC
CGTGTAGCTCACGTGATCTGGACTTGAGCCCACAATAATGTTCTTTGGGG
GTCACATTTCTTTGGGGGTCACATTCCTGTTCGGGCACTTCTATCCTGAC
TTCTCGATGGTTGACACTTTGACTACAACCCTAGGATCTCAAGGATTTCT
TCCGCTCGGCTGGAGATATCACGTACGCCAATGTCCACTCTCCCCGTCAA
GGGCAAGGCATTGTCGAATTTGCTAGTCGCCGAGGCTTGGACAATGCTCT
GGACAACCAGGAGGACATCGAGCTCGATGGACGCCGTCTCAAAATCCGCG
AGGAGCGCCGGGGAGGCCGTTCCAACTCCGGCTCTCGCTCCCGATCTCGC
TCACGTACCCCCAGATCGGATGGGTCGCGCTCTAGGAGTCGATCCAAGTC
TCGATCGCGCTCCCGATCGCCATCCCGGAGCCGGTCCCGTTCCAAGGAGA
GCAACTAAACTAATGCGGAAGGGAATGTATGCAATTGCAAATAAGTATTC
AAGAAGGAACCAGAGTTCCTCCCAATTTTTGTCATGATCCCTTTGCCGCA
CTCGATGTGGACCACCCTTACAAGATCCCAATACAAATTCCCTCTGTGTG
TATGATGTAAGTTACATTTTCTTCCGAATTACAAAAAAGAAAGGTTCAA
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Synonyms
The feature 'serine-arginine protein 55' has the following synonyms
Synonym
Tk00270
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