nicotinic acetylcholine receptor subunit alpha1, maker-scaffold33_size549341-snap-gene-0.15 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Match: EMLSAG00000009264 (supercontig:LSalAtl2s:LSalAtl2s58:470357:532297:1 gene:EMLSAG00000009264 transcript:EMLSAT00000009264 description:"maker-LSalAtl2s58-snap-gene-5.5") HSP 1 Score: 644.425 bits (1661), Expect = 0.000e+0 Identity = 343/500 (68.60%), Postives = 390/500 (78.00%), Query Frame = 0 Query: 19 ASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMY----ETSKSTSNLVSSKELPMITENSGL--------------------TNNDNLAYPLSPTDDWPSEGLYSTTF-------------DEKHSHLIP-----------NRDFV---RPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFE 467 A+PDAKRLYDDLLSNY+RLIRPVGNSSDRLTVK+GLKLSQIIG+DMKRQI+ITNVWV QEWHDYKLKW PE+YGGV+HLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLH+SG+V WNPPAIYKSSC+IDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQK ++ IE+GMDLQEYYISTEWD+M AVRNEKYYPCCEEPYPDI F L LRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIP TS +VPLLGKYLLFTMILVT SV++TIGVLNVNFRTPATHKMAPWV+KTFV+ LP++LFIRRPE +E+ ++ V++ E + + L+ S + PM + L + D++ +SP+ P G ++ F + S L+P + D+ R ++ LNPA+E+AMNALKFVAQHVKNED F Sbjct: 24 ANPDAKRLYDDLLSNYDRLIRPVGNSSDRLTVKMGLKLSQIIGIDMKRQIMITNVWVAQEWHDYKLKWKPEDYGGVKHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHFSGRVVWNPPAIYKSSCEIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKGSSSEIEIGMDLQEYYISTEWDVMTAPAVRNEKYYPCCEEPYPDIIFYLTLRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPSTSIAVPLLGKYLLFTMILVTFSVMLTIGVLNVNFRTPATHKMAPWVRKTFVEFLPRFLFIRRPE-KEEEEEEEVLFTPETECDEKSQALLQSSQPPMFLQKEDLLKIPPPFSLDHDEKSLQRISPSRDDIQSKISPSSGDPFYGSGNSGFPLYPLPLGGIDSSKDSVSELVPTFYGGSESMGYHGDYSSCERHLDKAHELNPALEKAMNALKFVAQHVKNEDXFR 522
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Match: EMLSAG00000001002 (supercontig:LSalAtl2s:LSalAtl2s116:424821:428389:1 gene:EMLSAG00000001002 transcript:EMLSAT00000001002 description:"maker-LSalAtl2s116-snap-gene-4.16") HSP 1 Score: 546.969 bits (1408), Expect = 0.000e+0 Identity = 291/548 (53.10%), Postives = 381/548 (69.53%), Query Frame = 0 Query: 8 SLLVYNLVGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEK--VSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRP--EPE------------------------------EDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKID 521 SL+ + G +PDAKRLYDDLLSNYN+L+RPV N SD +TVKL LKLSQ+I V+++ QI+ TN+WVEQ W+DYK++W+P+EYGGV LHVPS +IW PDIVLYNNADGN+EVT+ TKA L +G V W PPAIY SSC++DVE+FPFDEQ C MKFGSWTYDG+ VDLRH +++GTN + +G+DL E+Y+S EWD++ A+RN K Y CC+EPY DI FN+ +RRK+LFYTVN+IIPC+GISFL+VLVFYLPSDSGEK VSLSISILLSLTVFFLLLAEIIPPTS VPLLGK++LFTMIL T S+ VT+ VLNV+FR+P TH MAPWV++ F+ +LP+ L +RRP PE + + + V YE S+ SK+ +NS +N+N + D+ S L+ T + N F+ P P+ P V RA++ ++++A+ K E++ +DWKYVAMV+DR+ LW FT+A ++G+ II+ AP +D+R IDV S+I+ Sbjct: 8 SLIFVMITGSCGNPDAKRLYDDLLSNYNKLVRPVVNVSDAVTVKLKLKLSQLIDVNLRNQIMTTNLWVEQFWYDYKMRWEPDEYGGVDMLHVPSDHIWRPDIVLYNNADGNFEVTLSTKATLFNTGLVVWRPPAIYHSSCEMDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHQEEEQGTNVVNIGVDLSEFYMSVEWDILAVPAIRNVKVYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTVLVFYLPSDSGEKXNVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNVHFRSPQTHTMAPWVRRVFIHILPRLLVMRRPGQSPESKMRSRPMIKENGYGHYMIEQVRLQHVIQQRESNHINVHYEASEDPETAYESKQ---NYKNSHFHDNNN-----TEIFDYSSCELHGTPENLPSPPPPLNPSFIYPG--PNGECPEVYRALDGVRYIAECTKREEDSCKVKEDWKYVAMVMDRLFLWIFTIAVLVGSAGIILQAPALYDTRAAIDVELSQIE 545
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Match: EMLSAG00000000084 (supercontig:LSalAtl2s:LSalAtl2s1011:37280:47532:-1 gene:EMLSAG00000000084 transcript:EMLSAT00000000084 description:"augustus_masked-LSalAtl2s1011-processed-gene-0.0") HSP 1 Score: 393.275 bits (1009), Expect = 2.215e-134 Identity = 172/293 (58.70%), Postives = 233/293 (79.52%), Query Frame = 0 Query: 76 EQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVM 368 + EW DYK WDP EYGGV ++VPS++IWLPDI+LYNNADG+Y VT MTKA+LHY GKV W PPAI+KSSC+IDVEFFPFD+Q CF+KFGSW++DG+ VDL HIN + + + GMDL EYY++ EWD+++ A R+ K YPCC EPYPDI+F++I+RRK LFY VN+IIPCVGI +LS+LVFYLP+ SGEK +L I+IL+S T++F L+ E+IP TSK++PLLG+YL+F+MI + +V +T +LN+++R P+TH+M WV++TF+ LP+ L +R P E+ D G++ Sbjct: 8 DHEWKDYKFTWDPSEYGGVTEIYVPSEHIWLPDIILYNNADGDYIVTTMTKAILHYDGKVVWTPPAIFKSSCEIDVEFFPFDKQTCFLKFGSWSFDGFQVDLVHINSQPDNDTVSYGMDLSEYYLNVEWDILEVPAERHVKTYPCCPEPYPDIYFSIIIRRKPLFYVVNLIIPCVGIFYLSILVFYLPAQSGEKTALVIAILVSQTLYFTLVIEVIPATSKTLPLLGRYLIFSMIFIAIAVTLTTIILNLHYRKPSTHRMPQWVRRTFIQRLPRILLMRVPIQED--QDWGIV 298 HSP 2 Score: 56.6102 bits (135), Expect = 5.825e-9 Identity = 23/50 (46.00%), Postives = 36/50 (72.00%), Query Frame = 0 Query: 471 DDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKI 520 DW VAMVLDR+ LW F ++ ++G+ +I++ +P ++ PIDVI+SKI Sbjct: 293 QDWGIVAMVLDRLFLWVFGISALVGSIMILVESPNMYEEVSPIDVIFSKI 342
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Match: EMLSAG00000005313 (supercontig:LSalAtl2s:LSalAtl2s283:621537:765197:1 gene:EMLSAG00000005313 transcript:EMLSAT00000005313 description:"maker-LSalAtl2s283-snap-gene-6.12") HSP 1 Score: 389.037 bits (998), Expect = 8.514e-133 Identity = 191/295 (64.75%), Postives = 225/295 (76.27%), Query Frame = 0 Query: 19 ASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVT 313 +PDAKRLYDDLLSNYN+L+RPV N++D L V++ LKLSQ+I V++K QI+ TN+WVEQ W DYKLKWDPEEYGGVR LHVPS +IW PDIVLYNNADGN+EVT+ TKA L ++G V W PPAIYKSSC+IDVE+FPFDEQ C MKFGSWTYDG+ VDLRH+ + GTN + +G+DL E+YI RK+LFYTVN+IIPC+GISFL+VL FYLPSDSGEKV+LSISIL SL VFFLL+ EIIPPTS VPLLGKYL+F MILV+ Sbjct: 49 GNPDAKRLYDDLLSNYNKLVRPVINTTDPLLVRIKLKLSQLIDVNLKNQIMTTNLWVEQYWFDYKLKWDPEEYGGVRQLHVPSDHIWRPDIVLYNNADGNFEVTLATKAXLWFNGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHMCEVDGTNVVPLGIDLSEFYI-----------------------------------RKTLFYTVNLIIPCMGISFLTVLTFYLPSDSGEKVTLSISILTSLYVFFLLVVEIIPPTSLVVPLLGKYLIFAMILVS 308
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Match: EMLSAG00000006919 (supercontig:LSalAtl2s:LSalAtl2s391:531733:535693:-1 gene:EMLSAG00000006919 transcript:EMLSAT00000006919 description:"snap_masked-LSalAtl2s391-processed-gene-5.26") HSP 1 Score: 384.8 bits (987), Expect = 9.430e-131 Identity = 212/461 (45.99%), Postives = 283/461 (61.39%), Query Frame = 0 Query: 9 LLVYNLVGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLY-----STTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNED 464 ++V+ +P AKRLYDDLLSNYNRLIRPV N++++LTV+LGLKLSQ+I VD+K Q++ TNVWVEQ+W DYKL W PEEYGGV L+VPSQ+IWLPDIVL+NNADG YEVT+MTKA L Y+G+V W PPAIYKSSC I+VE+FPFDEQ C MKFGSWTYDG+ VDL+H++Q+KG+N +++G+DL+E+Y Y+V + C+ I LS+ VF+ LLLAEIIPPTS +VPLLGKYLLFTMILVT S+ VT+GVLN++FR+PATH+M+PW++K F+ ++P+ L + RP Y S + S+ +ND+L Y D S+ L +T D+ + +D +P ++ S N A A+ ++F+AQH+KN D Sbjct: 13 IVVFTEHARGGNPHAKRLYDDLLSNYNRLIRPVSNNTEKLTVRLGLKLSQLIDVDLKNQVMTTNVWVEQKWLDYKLNWKPEEYGGVEMLYVPSQHIWLPDIVLFNNADGKYEVTLMTKARLKYTGEVVWKPPAIYKSSCKINVEWFPFDEQSCDMKFGSWTYDGFQVDLKHVDQEKGSNVVKVGIDLKEFY-----------------------------------------YSVTL---CISI-LLSLTVFF-----------------------LLLAEIIPPTSLAVPLLGKYLLFTMILVTLSICVTVGVLNIHFRSPATHRMSPWMRKIFIHIMPRMLLMTRPH-----------YIPRYSAEPPLKSR------------SNDDLMY----NQDQDSKKLNGHCGPTTNEDQCKKNGKDEQDSTKPNKKKSISNVAC--ALRGVEFIAQHIKNAD 376
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Match: EMLSAG00000002955 (supercontig:LSalAtl2s:LSalAtl2s16:183923:308993:1 gene:EMLSAG00000002955 transcript:EMLSAT00000002955 description:"maker-LSalAtl2s16-augustus-gene-3.5") HSP 1 Score: 337.421 bits (864), Expect = 7.758e-114 Identity = 161/256 (62.89%), Postives = 200/256 (78.12%), Query Frame = 0 Query: 19 ASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSI 274 +PDAKRLYDDLLSNYN+L+ PV N S+ +TV+L LKLSQ+I V++K QI+ TN+WVEQ W+DYKL+WDP E H++ N +L +ADGN+EVT+ TKA L SGKV W PPAIY SSC++DVE+FPFDEQ C MKFGSWTYDGY VDLRHI++ G +E+G+DL E+Y+S EWD+++ A+RN KYY CC EPY DI FN+ +RRK+LFYTVN+IIPC+GISFL+VLVFYLPSDSGEKV I Sbjct: 25 GNPDAKRLYDDLLSNYNKLVXPVVNVSEAVTVRLKLKLSQLIDVNLKNQIMTTNLWVEQYWYDYKLQWDPTE----NHVY----NFYL----FPRSADGNFEVTLATKATLMASGKVEWKPPAIYHSSCEMDVEYFPFDEQTCVMKFGSWTYDGYQVDLRHIDEVMGKPEVEIGVDLTEFYMSVEWDILEVPAIRNVKYYXCCXEPYLDITFNVTMRRKTLFYTVNLIIPCMGISFLTVLVFYLPSDSGEKVRRCI 268
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Match: EMLSAG00000007263 (supercontig:LSalAtl2s:LSalAtl2s408:502144:561240:1 gene:EMLSAG00000007263 transcript:EMLSAT00000007263 description:"maker-LSalAtl2s408-augustus-gene-5.30") HSP 1 Score: 318.161 bits (814), Expect = 1.728e-101 Identity = 175/357 (49.02%), Postives = 237/357 (66.39%), Query Frame = 0 Query: 1 MLVGLVASLLVYNLVGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPE 357 ML+ L+ LL G S + +RL DL YN+LIRPV N + ++ V GL Q+I V+ K QI+ +NVW+ W+DY+L+WD +YGG+ L +P +W PDIVL+NNADGNYEV + +++ G+V W PPAIY+SSC IDV +FPFD+Q C MKFGSWT+ G V L N K +DL +Y+ S WD+++ A N E DI F + +RRK+LFYTVN+I+P V ISFL VLVFYLP+++GEKV+L ISILLSL VF LL+++I+PPTS +PL+ KYLLFT I+ T S++VT+ ++N NFR P TH M W++ F+ LP LF+RRP+ Sbjct: 6 MLIILLTFLLRLFSPG-HGSQEEERLVRDLFRGYNKLIRPVQNMTQKVEVAFGLAFIQLINVNEKNQIMKSNVWLRFVWNDYQLQWDEADYGGISVLRLPPDKVWKPDIVLFNNADGNYEVRYKSNVLIYPDGEVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFTGDQVSLTLYNNKD-------YVDLSDYWKSGTWDIIEVPAYLNIHNDTLPTE--TDISFYITIRRKTLFYTVNLILPTVLISFLCVLVFYLPAEAGEKVTLGISILLSLVVFLLLVSKILPPTSLVLPLIAKYLLFTFIMNTVSILVTVVIINWNFRGPRTHSMPNWIRVLFLKYLPIVLFMRRPK 352 HSP 2 Score: 63.929 bits (154), Expect = 4.936e-11 Identity = 32/81 (39.51%), Postives = 48/81 (59.26%), Query Frame = 0 Query: 442 LNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAP---THHDSRKPIDVIYSK 519 L+P RA A++F+A+H++NED + +DWK+VAMV+D L+ F +GT I+M AP + D K ID+ K Sbjct: 559 LSPEAYRATQAVEFIAEHLRNEDEYLQIREDWKFVAMVVDXXQLYVFFXVTTVGTVGILMDAPHIFEYVDQDKIIDIYKGK 639
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Match: EMLSAG00000006524 (supercontig:LSalAtl2s:LSalAtl2s357:373959:378480:-1 gene:EMLSAG00000006524 transcript:EMLSAT00000006524 description:"augustus_masked-LSalAtl2s357-processed-gene-3.1") HSP 1 Score: 166.392 bits (420), Expect = 1.097e-44 Identity = 106/378 (28.04%), Postives = 187/378 (49.47%), Query Frame = 0 Query: 25 RLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNAD-GNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAP-WVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLA 400 RL + LL Y++ + PV N SD + V +G+ L + ++K + + + W+ W D L WDP +Y + +H IW PDI+ YNNA+ + T ++H++G V W PP K+ C +D++ +P D Q C +KFGSWT +DL +I+ Y EW +++T V+N Y + Y DI F+ ++R S Y +I+PC+ +S F LPS+S EK+ L+ + ++ + A I+P S +VP+L K+ T++L+ ++V+ + VLN+ H P +++ F L K L + + + + + ++ S + P +++ +++ND L Sbjct: 265 RLRNVLLEKYDKEVHPVSNHSDTVVVSVGMSLIHLDINELKSTMDV-DAWMRFTWIDEYLSWDPSDYENLTKIHFSEDEIWQPDILPYNNANPESLNPYHKTSFLVHHTGDVLWVPPVHLKAFCRLDLKMWPLDTQTCSLKFGSWTSHANQIDLALFKNATVVEKIDF------YTKDREWVVLNTTVVKNSVSYVEHPDIYADITFSFNMKRISQSYKYVIILPCLVTMLMSTCSFGLPSNSHEKLFLNGIAFIVCVLYLVYFATILPFQSSTVPILVKFYSNTVVLIGAAIVINVIVLNMT--QVRKHVYPPKFLRIIFAGPLGKCLCLDHXRHQ--ISSTHTRLQVNNELIDMAESXQPPDLSQRRTISSNDGLT 631
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Match: EMLSAG00000003136 (supercontig:LSalAtl2s:LSalAtl2s175:296544:305979:-1 gene:EMLSAG00000003136 transcript:EMLSAT00000003136 description:"maker-LSalAtl2s175-snap-gene-3.18") HSP 1 Score: 148.673 bits (374), Expect = 1.642e-40 Identity = 95/321 (29.60%), Postives = 161/321 (50.16%), Query Frame = 0 Query: 24 KRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEP-YPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTF 343 K++ + + +NYN L RPV + + + + +G+ L +IIG+D K QI+ N+W+ W D+ L W+ EY + L +P+++ +I L + W P + +S F Y V+L N+ G R +Q EW+++ A+R E Y CC++ + DI + + LRR++L+Y N +PCV I+ +++L FY P +SGEK++L I+IL+SLT F ++ ++ PP+SK+ PL+G Y MI++ SV+ +I V+N + R M W + F Sbjct: 24 KKVLNFVFNNYNILERPVRDPKEPVQLSMGVSLRRIIGLDEKNQILTANLWITLIWKDHNLHWNRSEYPKIERLQIPTEH------------------SIPKLERLQIPTEHVWTPDILLYNSASTAFNNF------------------YHVNLLLSNE--GEIRYMPPGIIQS--TCEEWEVLGMPAIRTEDIYDCCKDKIFQDITYTIQLRRRTLYYLGNWTLPCVLIASMAILGFYFPPESGEKITLEITILMSLTFFMNMVTDMQPPSSKT-PLVGIYFSCIMIMIASSVICSILVINYHHRLTEYGDMPKWFRFIF 303
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Match: EMLSAG00000007737 (supercontig:LSalAtl2s:LSalAtl2s44:961763:992679:1 gene:EMLSAG00000007737 transcript:EMLSAT00000007737 description:"maker-LSalAtl2s44-augustus-gene-10.10") HSP 1 Score: 148.288 bits (373), Expect = 2.541e-39 Identity = 105/376 (27.93%), Postives = 170/376 (45.21%), Query Frame = 0 Query: 198 YYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFT-----------------------------------------MILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEP---------EEDVDDLGVMYETSKS--------------TSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLI-PNRDFVRPQEEPSTLNPAVERAMN----ALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAP 504 Y ++ EW L+ RNE +Y CC EPY D+ F + +RR++L+Y N+I+PCV I+ ++VL F LP DSGEK+SL +++LLSLTVF ++E +P TS VPLLG +L + M +V SVV TI +LN + R TH+M WV+ F+ +P L + RP + + +L + +SKS S L +G + + A + + + GL+ L D S + P + R ++ ++ + ++ +++ +DWK+ AMVLDR+ L TFT+ ++ T ++ +AP Sbjct: 85 YVLNGEWALLGVPGKRNEVFYDCCPEPYLDVTFVIKIRRRTLYYFFNLIVPCVLIASMAVLGFTLPPDSGEKLSLGVTVLLSLTVFQQNVSEAMPVTSLQVPLLGFTILLSLTVFSQVVSESMPATSDALPLLVTFFLFHAYISKGTYFNCIMFMVASSVVTTIMILNYHHRLADTHEMPNWVRCVFLQWIPWVLRMGRPGEKITRKTILMQNKMKELDLKERSSKSLLANVLDMDDDFRPASTLPHIHPHHPSHSLAGGSGTGSTANSSTKSGFRVTPGLHQPPPPPPPPPLGNSTGDVTLGDGMTSGIPPGIHRELSLILKEIRVITDKIREDEDTAAIENDWKFAAMVLDRLCLITFTMFTIIATVAVLFSAP 460
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|231487|sp|P09481.2|ACHA3_CHICK (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 424.091 bits (1089), Expect = 6.278e-143 Identity = 219/486 (45.06%), Postives = 310/486 (63.79%), Query Frame = 0 Query: 16 GLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMYETSK-STSNLVSSKELPMITENSGLTNND----NLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGT 496 G S RLY L NYN+ +RPV N+SD + ++ + +SQ++ VD QI+ TN+W++ W+DYKL+W+P +YGG + VPS IW PDIVLYNNA G+++V TKA+L Y+G VTW PPAI+KSSC IDV +FPFD Q C MKFGSW+YD +DL I M+L++Y+ S EW ++ +++ Y CCEE Y DI ++L +RR LFYT+N+IIPC+ ISFL+VLVFYLPSD GEKV+L IS+LLSLTVF L++ E IP TS +PL+G+YLLFTMI VT S+V+T+ VLNV++RTP TH M WV+ F+++LP+ +F+ RP +E+ + + TS+ S N +S E+ + G D Y D+ S++ + V P S L+P + A+ ++K++A+++K ++ + DDWKYVAMV+DRI LW F + C+LGT Sbjct: 19 GCGGSEPEHRLYAALFKNYNQFVRPVKNASDPVIIQFEVSMSQLVKVDEVNQIMETNLWLKHIWNDYKLRWNPVDYGGAEFIRVPSGQIWKPDIVLYNNAVGDFQVDDKTKALLKYTGDVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGST---------MNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYTDITYSLYIRRLPLFYTINMIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPKTHTMPVWVRTIFLNLLPRIMFMTRPTSDEENNQKPKPFYTSEFSNLNCFNSSEIKCCKD--GFVCQDMACSCCQYQRMKFSDFSGNLTRSSSSES-----------VDPLFSFSVLSPEMRDAIESVKYIAENMKMQNEAKEIQDDWKYVAMVIDRIFLWVFILVCILGT 482
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|113061|sp|P04757.1|ACHA3_RAT (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 423.32 bits (1087), Expect = 1.191e-142 Identity = 221/485 (45.57%), Postives = 302/485 (62.27%), Query Frame = 0 Query: 19 ASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEP-EEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEP------STLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGT 496 AS RL+ L +YN +IRPV N S + ++ + +SQ++ VD QI+ TN+W++Q W+DYKLKW P +Y GV + VP++ IW PDIVLYNNADG+++V TKA+L Y+G+VTW PPAI+KSSC IDV +FPFD Q C MKFGSW+YD +DL I M+L++Y+ S EW ++ ++E Y CCEE Y DI ++L +RR LFYT+N+IIPC+ ISFL+VLVFYLPSD GEKV+L IS+LLSLTVF L++ E IP TS +PL+G+YLLFTMI VT S+V+T+ VLNV++RTP TH M WVK F+++LP+ +F+ RP E D Y S N S + E YP Y K S+ N E S L+P ++ A+ ++K++A+++K ++ + DDWKYVAMV+DRI LW F + C+LGT Sbjct: 25 ASEAEHRLFQYLFEDYNEIIRPVANVSHPVIIQFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYNNADGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGS---------SMNLKDYWESGEWAIIKAPGYKHEIKYNCCEEIYQDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRPTSGEGDTPKTRTFYGAELSNLNCFSRADSKSCKE----------GYPCQ-----DGTCGYCHHRRVKISNFSANLTRSSSSESVNAVLSLSALSPEIKEAIQSVKYIAENMKAQNVAKEIQDDWKYVAMVIDRIFLWVFILVCILGT 485
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|1351849|sp|P49581.1|ACHA6_CHICK (RecName: Full=Neuronal acetylcholine receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 417.927 bits (1073), Expect = 1.305e-140 Identity = 213/493 (43.20%), Postives = 306/493 (62.07%), Query Frame = 0 Query: 4 GLVASLLVYNLVGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGT 496 G A +L + A +RL+ L S YN+ IRPV N SD +TV L ++Q+ VD QI+ TN+W+ W+DYKL+ DP EY G+ + VP+ IW PDIVLYNNA G+++V TKA+L Y G +TW PPAI+KSSC +D+ FFPFD Q C +KFGSWTYD +DL I K +D+ E++ ++EW+++D +++ Y CCEE Y DI ++ +RR +FYT+N+IIPC+ ISFL+VLVFYLPSD GEKV+L IS+LLSLTVF L++ E IP TS +PL+G+YLLFTMI VT S+V+T+ VLN+++RTP TH M WVK F+ +LPK L ++RP +E + + S TS ++ + DN + ++T + SH ++ E + +P V+ +N ++F+A+++K+++ + DDWKYVAMV+DR+ LW F + CV GT Sbjct: 15 GAWAFMLTSLIADTTACESEERLFHKLFSRYNQFIRPVENVSDPVTVHFELAITQLTNVDEVNQIMETNLWLRHIWNDYKLRRDPREYDGIEFVRVPADKIWKPDIVLYNNAVGDFQVEGKTKALLRYDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAKIDLLIIGSK---------VDMNEFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFVTLSIVITVFVLNIHYRTPTTHTMPKWVKTVFLSLLPKVLLMQRPLEQEKKNISKKTKKGSAKTSG-----------KSKHSKHKDNKLHKEQRCCHCDKADDLTSTRRSRLSH-----QSLKWMAEHTEYSPEVKDVINNVQFIAENMKSQNETKEVEDDWKYVAMVIDRVFLWVFIILCVFGT 482
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|113053|sp|P09480.1|ACHA2_CHICK (RecName: Full=Neuronal acetylcholine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 414.461 bits (1064), Expect = 1.005e-138 Identity = 237/518 (45.75%), Postives = 324/518 (62.55%), Query Frame = 0 Query: 6 VASLLVYNLVGLEASPDAK---------RLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPE---PEEDV----DDLGVMYETSKS-TSNLVSSK--ELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSH--------LIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGT 496 + LLV+ V L+A+ + RL+ L + YNR RPV N+SD + VK GL ++Q+I VD K Q++ TNVW++QEW DYKL+W+PE++ V + VPS+ IW+PDIVLYNNADG + VT MTKA L +GKV W PPAIYKSSC IDV +FPFD+Q C MKFGSWTYD +DL + +E +DL++Y+ S EW +++ N K Y CC E YPDI F ++RR LFYT+N+IIPC+ IS L+VLVFYLPSD GEK++L IS+LLSLTVF LL+ EIIP TS +PL+G+YLLFTMI VT S+++T+ VLNV+ R+P+TH M WV+ F+ +P++LF++RP P E D G TS+ V K E E + AYP S S+G E+ + +P + ++ TL+P++ RA+ ++++A H++ ED +DWKYVAMV+DRI LW F + C+LGT Sbjct: 8 IIPLLVWCFVTLQAATREQKQPHGFAEDRLFKHLFTGYNRWSRPVPNTSDVVIVKFGLSIAQLIDVDEKNQMMTTNVWLKQEWSDYKLRWNPEDFDNVTSIRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSNGKVKWVPPAIYKSSCSIDVTYFPFDQQNCKMKFGSWTYDKAKIDLEN---------MEHHVDLKDYWESGEWAIINAIGRYNSKKYDCCTEIYPDITFYFVIRRLPLFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSIIITVFVLNVHHRSPSTHTMPHWVRSFFLGFIPRWLFMKRPPLLLPAEGTTGQYDPPGTRLSTSRCWLETDVDDKWEEEEEEEEEEEEEEEEEKAYP-SRVPSGGSQGTQCHYSCERQAGKASGGPAPQVPLKGEEVGSDQGLTLSPSILRALEGVQYIADHLRAEDADFSVKEDWKYVAMVIDRIFLWMFIIVCLLGT 515
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|2492620|sp|Q15825.1|ACHA6_HUMAN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 412.92 bits (1060), Expect = 1.088e-138 Identity = 221/503 (43.94%), Postives = 309/503 (61.43%), Query Frame = 0 Query: 4 GLVASLLVYN--LVGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPE-----EDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQE---EPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGT 496 GL L V+ G +RL+ L S+YN+ IRPV N SD +TV + ++Q+ VD QI+ TN+W+ W+DYKL+WDP EY G+ L VP+ IW PDIVLYNNA G+++V TKA+L Y+G +TW PPAI+KSSC +D+ FFPFD Q C +KFGSWTYD +DL I K +D+ +++ ++EW+++D +++ Y CCEE Y DI ++ +RR +FYT+N+IIPC+ ISFL+VLVFYLPSD GEKV+L IS+LLSLTVF L++ E IP TS VPL+G+YLLFTMI VT S+VVT+ VLN+++RTP TH M WVK F+ +LP+ L +R P + D G+ +K L S E + E ++ LA T + SH +P + E S +P VE +N+++F+A+++K+ + + DDWKYVAMV+DR+ LW F + CV GT Sbjct: 13 GLCLWLCVFTPFFKGCVGCATEERLFHKLFSHYNQFIRPVENVSDPVTVHFEVAITQLANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRVPADKIWKPDIVLYNNAVGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDLLIIGSK---------VDMNDFWENSEWEIIDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVVPLVGEYLLFTMIFVTLSIVVTVFVLNIHYRTPTTHTMPRWVKTVFLKLLPQVLLMRWPLDKTRGTGSDAVPRGLARRPAK--GKLASHGEPRHLKECFHCHKSNELA-----------------TSKRRLSH--------QPLQWVVENSEHSPEVEDVINSVQFIAENMKSHNETKEVEDDWKYVAMVVDRVFLWVFIIVCVFGT 479
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|1168297|sp|P43143.1|ACHA6_RAT (RecName: Full=Neuronal acetylcholine receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 412.149 bits (1058), Expect = 2.677e-138 Identity = 212/484 (43.80%), Postives = 302/484 (62.40%), Query Frame = 0 Query: 16 GLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRP-EPEEDVDDLGVMYETSKSTSNL--VSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGT 496 G ++L+ L ++YNR IRPV N SD +TV L ++Q+ VD QI+ TN+W+ W DY+L WDP EY G+ L VP+ NIW PDIVLYNNA G+++V TKA+L Y G +TW PPAI+KSSC +D+ FFPFD Q C +KFGSWTYD +DL I K +D+ +++ ++EW+++D +++ Y CCEE Y DI ++ +RR +FYT+N+IIPC+ ISFL+VLVFYLPSD GEKV+L IS+LLSLTVF L++ E IP TS +PL+G+YLLFTMI VT S+VVT+ VLN+++RTPATH M WVK F+ V P L +RRP + +++D + +K + + KE ++ E + +A P + L P + E P P VE +++++F+A+++K+ + + DDWKY+AMV+DR+ LW F + CV GT Sbjct: 27 GSRGCVSEEQLFHTLFAHYNRFIRPVENVSDPVTVHFELAITQLANVDEVNQIMETNLWLRHVWKDYRLCWDPTEYDGIETLRVPADNIWKPDIVLYNNAVGDFQVEGKTKALLKYDGVITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDLLIIGSK---------VDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMIFVTLSIVVTVFVLNIHYRTPATHTMPKWVKTMFLQVFPSILMMRRPLDKTKEMDGVKDPKTHTKRPAKVKFTHRKEPKLLKECRHCHKSSEIA---------PGKRLSQQ----------PAQWVTENSEHP----PDVEDVIDSVQFIAENMKSHNETKEVEDDWKYMAMVVDRVFLWVFIIVCVFGT 478
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|61211734|sp|Q5IS76.1|ACHA6_PANTR (RecName: Full=Neuronal acetylcholine receptor subunit alpha-6; Flags: Precursor) HSP 1 Score: 412.149 bits (1058), Expect = 2.795e-138 Identity = 220/503 (43.74%), Postives = 308/503 (61.23%), Query Frame = 0 Query: 4 GLVASLLVYN--LVGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPE-----EDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQE---EPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGT 496 GL L V+ G +RL+ L S+YN+ IRPV N SD +TV + ++Q+ VD QI+ TN+W+ W+DYKL+WDP EY G+ L +P+ IW PDIVLYNNA G+++V TKA+L Y+G +TW PPAI+KSSC +D+ FFPFD Q C +KFGSWTYD +DL I K +D+ +++ ++EW+++D +++ Y CCEE Y DI ++ +RR +FYT+N+IIPC+ ISFL+VLVFYLPSD GEKV+L IS+LLSLTVF L++ E IP TS VPL+G+YLLFTMI VT S+VVT+ VLN+++RTP TH M WVK F+ +LP+ L +R P + D G+ +K L S E + E ++ LA T + SH P + E S +P VE +N+++F+A+++K+ + + DDWKYVAMV+DR+ LW F + CV GT Sbjct: 13 GLCLWLCVFTPFFKGCVGCATEERLFHKLFSHYNQFIRPVENVSDPVTVHFEVAITQLANVDEVNQIMETNLWLRHIWNDYKLRWDPMEYDGIETLRIPADKIWKPDIVLYNNAVGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDLLIIGSK---------VDMNDFWENSEWEIIDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVVPLVGEYLLFTMIFVTLSIVVTVFVLNIHYRTPTTHTMPRWVKTVFLKLLPQVLLMRWPLDKTRGTGSDAVPRGLARRPAK--GKLASHGEPRHLKECFHCHKSNELA-----------------TSKRRLSH--------HPLQWVVENSEHSPEVEDVINSVQFIAENMKSHNETKEVEDDWKYVAMVVDRVFLWVFIIVCVFGT 479
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|61211728|sp|Q5IS52.1|ACHA2_PANTR (RecName: Full=Neuronal acetylcholine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 412.92 bits (1060), Expect = 3.685e-138 Identity = 223/474 (47.05%), Postives = 306/474 (64.56%), Query Frame = 0 Query: 25 RLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPT-DDWPSEG-LYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGT 496 RL+ L YNR RPV N+SD + V+ GL ++Q+I VD K Q++ TNVW++QEW DYKL+W+P ++G + L VPS+ IW+PDIVLYNNADG + VT MTKA L +G V W PPAIYKSSC IDV FFPFD+Q C MKFGSWTYD +DL + Q +DL++Y+ S EW +++ N K Y CC E YPD+ + I+RR LFYT+N+IIPC+ IS L+VLVFYLPS+ GEK++L IS+LLSLTVF LL+ EIIP TS +PL+G+YLLFTMI VT S+V+T+ VLNV+ R+P+TH M WV+ T + +P++L + RP P ++ + + S S L S+ + + A ++P+ S G L+S K L+ QE L+P +++A+ + ++A H+++ED +DWKYVAMV+DRI LW F + C LGT Sbjct: 61 RLFKHLFRGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWSDYKLRWNPADFGNITSLRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLEQMEQT---------VDLKDYWESGEWAIVNATGTYNSKKYDCCAEIYPDVTYAFIIRRLPLFYTINLIIPCLLISCLTVLVFYLPSNCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPSTHTMPHWVRGTLLGCVPRWLLMNRPPPPLELCH-PLHLKLSPSYHWLESNVDAEEREVVVEEEDRWACAGHVAPSVGTLCSHGHLHSGASGPKAEALL--------QEGELLLSPHMQKALEGVHYIADHLRSEDADSSVKEDWKYVAMVIDRIFLWLFIIVCFLGT 516
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|308153405|sp|Q15822.2|ACHA2_HUMAN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 411.764 bits (1057), Expect = 9.253e-138 Identity = 222/474 (46.84%), Postives = 305/474 (64.35%), Query Frame = 0 Query: 25 RLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPT-DDWPSEG-LYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGT 496 RL+ L YNR RPV N+SD + V+ GL ++Q+I VD K Q++ TNVW++QEW DYKL+W+P ++G + L VPS+ IW+PDIVLYNNADG + VT MTKA L +G V W PPAIYKSSC IDV FFPFD+Q C MKFGSWTYD +DL + Q +DL++Y+ S EW +++ N K Y CC E YPD+ + ++RR LFYT+N+IIPC+ IS L+VLVFYLPSD GEK++L IS+LLSLTVF LL+ EIIP TS +PL+G+YLLFTMI VT S+V+T+ VLNV+ R+P+TH M WV+ + +P++L + RP P ++ + + S S L S+ + + A ++P+ S G L+S K L+ QE L+P +++A+ + ++A H+++ED +DWKYVAMV+DRI LW F + C LGT Sbjct: 61 RLFKHLFRGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWSDYKLRWNPTDFGNITSLRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFSTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLEQMEQT---------VDLKDYWESGEWAIVNATGTYNSKKYDCCAEIYPDVTYAFVIRRLPLFYTINLIIPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPSTHTMPHWVRGALLGCVPRWLLMNRPPPPVELCH-PLRLKLSPSYHWLESNVDAEEREVVVEEEDRWACAGHVAPSVGTLCSHGHLHSGASGPKAEALL--------QEGELLLSPHMQKALEGVHYIADHLRSEDADSSVKEDWKYVAMVIDRIFLWLFIIVCFLGT 516
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|62901488|sp|Q91X60.1|ACHA2_MOUSE (RecName: Full=Neuronal acetylcholine receptor subunit alpha-2; Flags: Precursor) HSP 1 Score: 410.609 bits (1054), Expect = 2.019e-137 Identity = 221/483 (45.76%), Postives = 307/483 (63.56%), Query Frame = 0 Query: 25 RLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDD-----LGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEE-PST-----LNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGT 496 RL+ L YNR RPV N+SD + V+ GL ++Q+I VD K Q++ TNVW++QEW+DYKL+WDP E+G + L VPS+ IW+PDIVLYNNADG + VT MTKA L ++G V W PPAIYKSSC IDV FFPFD+Q C MKFGSWTYD +DL ++E +DL++Y+ S EW +++ N K Y CC E YPD+ + ++RR LFYT+N+IIPC+ IS L+VLVFYLPS+ GEK++L IS+LLSLTVF LL+ EIIP TS +PL+G+YLLFTMI VT S+V+T+ VLNV+ R+P+TH M WV+ + +P++L + RP P ++ L Y ++ + +E E N A GL ++ + H + + P+ + PS L+P +++A+ + ++A H+++ED +DWKYVAMV+DRI LW F + C LGT Sbjct: 38 RLFKHLFGGYNRWARPVPNTSDVVIVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWNDYKLRWDPAEFGNITSLRVPSEMIWIPDIVLYNNADGEFAVTHMTKAHLFFTGTVHWVPPAIYKSSCSIDVTFFPFDQQNCKMKFGSWTYDKAKIDLE---------QMERTVDLKDYWESGEWAIINATGTYNSKKYDCCAEIYPDVTYYFVIRRLPLFYTINLIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHHRSPSTHNMPNWVRVALLGRVPRWLMMNRPLPPMELHGSPGLKLSPTYHWLETNMDAEEREETEEEEEEEEDENICMCA------------GLPDSSMGVLYGHGSLHLRAMGPEAKTPSQASEILLSPQIQKALEGVHYIADHLRSEDADSSVKEDWKYVAMVVDRIFLWLFIIVCFLGT 499
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|1061480309|gb|ODM97750.1| (Acetylcholine receptor subunit alpha-like 2 [Orchesella cincta]) HSP 1 Score: 670.233 bits (1728), Expect = 0.000e+0 Identity = 330/508 (64.96%), Postives = 398/508 (78.35%), Query Frame = 0 Query: 16 GLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKK 523 G E +PDAKRLYDDLLSNYNRLIRPVGN+SDRLTVKLGLKLSQ+I V++K QI+ TNVWVEQEWHDYKL W+PE+YGGV LHVPS++IWLPDIVLYNNADGNYEVTIMTKA+L+Y+G V W PPAIYKSSC+IDVE+FPFD+Q C MKFGSWTYDGY VDLRHINQ +N IE+G+DLQ+YYIS EWD+M A RNEKYY CCEEPYPDI FN+ LRRK+LFYTVN+IIPCVGISFLSVLVFYLPSDSGEK+SL ISILLSLTVFFLLLAEIIPPTS +VPLLGKYLLFTMIL+T SV+VTIG+LNVN+R+PATHKM+PWV++ F+++LPKYL I+RP ++D D S ++ ++ + GL + P P+ PS S + +H +F + PS +E++ ++F+AQH+KN+D FE +DWKYVAMVLDR+ LW FT +C+LGT II AP+ +DS +PIDV+YSKI K+ Sbjct: 36 GTEGNPDAKRLYDDLLSNYNRLIRPVGNNSDRLTVKLGLKLSQLIDVNLKNQIMTTNVWVEQEWHDYKLMWNPEDYGGVETLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILNYTGTVRWKPPAIYKSSCEIDVEYFPFDQQTCTMKFGSWTYDGYTVDLRHINQTLDSNDIELGIDLQDYYISVEWDIMGVPAARNEKYYSCCEEPYPDIMFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKMSLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILITLSVMVTIGILNVNYRSPATHKMSPWVRQLFIELLPKYLLIKRPN-KDDDGDDDDDDNNPAPRSLVMGQQDSLQVCHIHGLNPPQEIDMPFYPS--LPSPIFLSESEALRH-------NFGEVRRFPS----EIEKSATNIRFIAQHMKNKDRFEAIEEDWKYVAMVLDRLFLWIFTSSCILGTIGIIFQAPSLYDSTRPIDVLYSKIAKQ 529
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|1325271350|ref|XP_023320284.1| (acetylcholine receptor subunit alpha-like 1 [Eurytemora affinis]) HSP 1 Score: 667.537 bits (1721), Expect = 0.000e+0 Identity = 347/529 (65.60%), Postives = 411/529 (77.69%), Query Frame = 0 Query: 14 LVGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPE-----EDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNN---DNLAYPLSPTDDWPSEGLY------STTFDEK-HSHLIPNR-DFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKKNTI 526 V A+PDAKRLY++LL+NY+RLIRPV NSSDRLTV L LKLSQ+IGVDM+RQI+ TNVWVEQEW DYKL WDP +YGGV+HLHVPSQ+IWLPDIVLYNNADGNYE+TIMTKA+LHY+G+VTW PPAIYKS C IDVEFFPFDEQ+C MKFGSW++DG MVDLRH+NQ N I + MDL+++YISTEWD+M AVRNEK+YPCCEEPYPDI F + LRRK+LFY VN+IIPCVGISFLSVLVFYLPS+SGEK+SLSISILLSLTVFFLLLAEIIPPTS SVPLLGKYLLFTMILVT SVVVTIGVLNVNFRTPATHKMAPWV+KTF+D LP+YLFI+RP+P+ E + LG + NLV + L L N+ D + L P+ + + + F+ K + HL N F + P + RA++A++FVAQHVKN+D ++ ADDWKYVAMVLDRILLW F+ ACV GT II AP+ +D+R+P+DV+ SK+ KKNTI Sbjct: 14 FVECTANPDAKRLYENLLANYDRLIRPVANSSDRLTVHLRLKLSQVIGVDMRRQILTTNVWVEQEWRDYKLSWDPADYGGVKHLHVPSQDIWLPDIVLYNNADGNYEITIMTKAILHYNGRVTWTPPAIYKSYCGIDVEFFPFDEQECRMKFGSWSHDGLMVDLRHMNQVPSNNNIPVAMDLRDFYISTEWDVMAVPAVRNEKFYPCCEEPYPDIVFRIYLRRKTLFYVVNLIIPCVGISFLSVLVFYLPSESGEKISLSISILLSLTVFFLLLAEIIPPTSLSVPLLGKYLLFTMILVTFSVVVTIGVLNVNFRTPATHKMAPWVRKTFIDFLPRYLFIQRPDPDPVEEDERTELLGGL--------NLVFPETLEERNSVERLLNHAQYDGGGFRLGPSGNGNQSHMMLQNIAQNNQFNGKDNGHLTLNSVRFDSGFRDYGDQEPHLTRAIHAVQFVAQHVKNQDRYDKVADDWKYVAMVLDRILLWVFSFACVAGTGGIIFVAPSLYDTREPLDVLVSKVGKKNTI 534
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|1111915303|gb|API81618.1| (nicotinic acetylcholine receptor alpha 1, partial [Cancer borealis]) HSP 1 Score: 667.537 bits (1721), Expect = 0.000e+0 Identity = 327/508 (64.37%), Postives = 401/508 (78.94%), Query Frame = 0 Query: 19 ASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTD-DWPSEGLYSTTFDEKHSHL-IPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKKN 524 A+PDAKRLYDDLLS+YNRLIRPVGN+SDRLTVKLGLKLSQ+I V++K QI+ TNVWVEQEW DYKL W+PEEYGGV LHVPS++IWLPDIVLYNNADGNYEVTIMTKA+LHY G+VTW PPAIYKSSC+IDVEFFPFD+Q CFMKFGSWTYDGYMVDL+H++Q++G+N ++ G+DL +YYIS EWD++ A+RNE++YPCC+EPYPDI+FN+ +RRK+LFYTVN+IIPCVGISFLSVLVFYLPSDSGEKVSL ISILLSLTVFFLLLAEIIPPTS +VPLLGKYLLFTMILVT SV+VTIGVLNVNFR+P+THKMAPWV+K F+D+LPK+L++ RP EE+ D + T + + P + A P SP D D + E H+ + P FV+ ++P N R + +++++AQH++N D+F DDW+YVAMVLDR+ LW F VACVLGTC II AP+ +D+ PID+ SK+ ++ Sbjct: 25 ANPDAKRLYDDLLSSYNRLIRPVGNNSDRLTVKLGLKLSQLIDVNLKNQIMTTNVWVEQEWRDYKLVWEPEEYGGVEILHVPSEHIWLPDIVLYNNADGNYEVTIMTKAMLHYDGRVTWKPPAIYKSSCEIDVEFFPFDQQTCFMKFGSWTYDGYMVDLQHLHQQRGSNLVDPGIDLNDYYISVEWDILKVPALRNERFYPCCQEPYPDIYFNITMRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSVMVTIGVLNVNFRSPSTHKMAPWVRKVFIDLLPKFLWVERPNKEEEGPDEVTAGGDTSFTPSSDGFDKFPFDDHPYEIP-----AIPPSPYDRDRYGDDHLPLPAPECHAQIHTPEAAFVQELDDPRPYND--HRTLRSIEYIAQHMRNVDSFSEIEDDWRYVAMVLDRLFLWIFMVACVLGTCGIIFRAPSLYDTTLPIDIQLSKVAQRR 525
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|1111915477|gb|API81630.1| (nicotinic acetylcholine receptor alpha 1 [Homarus americanus]) HSP 1 Score: 665.226 bits (1715), Expect = 0.000e+0 Identity = 329/525 (62.67%), Postives = 410/525 (78.10%), Query Frame = 0 Query: 18 EASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEP-EEDVDDLGVMYETSKSTSNLVSSK--------ELPMITE---NSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKKNTIFTMN 530 +A+PDAKRLYDDLLS+YNRLIRPVGN+SDRLTVKLGLKLSQ+I V++K QI+ TNVWVEQEW DYKL W+PE+YGGV LHVPS++IWLPDIVLYNNADGNYEVTIMTKAVLHY G+VTW PPAIYKSSC+IDVEFFPFD+Q CFMKFGSWTYDGYMVDL+H++Q++G+N ++ G+DL +YYIS EWD++ A+RNE++YPCC+EPYPDI+FN+ +RRK+LFYTVN+IIPCVGISFLSVLVFYLPSDSGEKVSL ISILLSLTVFFLLLAEIIPPTS +VPLLGKYLLFTMILVT SV+VTIGVLNVNFR+P+THKMAPWV+K F+++LPK+L++ RP+ EE D++ +TS + S+ K ++P I + +D+LA P + H+H + FV EEP + R + +++++AQH++N D+F DDW+YVAMVLDR+ LW F VACVLGTC II AP+ +D+ PID+ SK+ ++ + M Sbjct: 13 QANPDAKRLYDDLLSSYNRLIRPVGNNSDRLTVKLGLKLSQLIDVNLKNQIMTTNVWVEQEWKDYKLVWEPEDYGGVEILHVPSEHIWLPDIVLYNNADGNYEVTIMTKAVLHYDGRVTWKPPAIYKSSCEIDVEFFPFDQQTCFMKFGSWTYDGYMVDLQHLHQQRGSNLVDPGIDLNDYYISVEWDILKVPALRNERFYPCCQEPYPDIYFNITMRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSVMVTIGVLNVNFRSPSTHKMAPWVRKVFIEMLPKFLWVERPKKDEEGPDEVTAGGDTSFTPSSDGFDKFPFEDHPYDIPAIPPSPYDRDRYGDDHLALPA------------PECHSQSHAHEVA---FVPELEEPRPYHD--HRTLRSIEYIAQHMRNVDSFGEIEDDWRYVAMVLDRLFLWIFMVACVLGTCGIIFRAPSLYDTTLPIDIQLSKVAQRRRLDLMG 520
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|157954035|ref|NP_001103245.1| (nicotinic acetylcholine receptor alpha1 subunit precursor [Tribolium castaneum] >gi|154810967|gb|ABS86902.1| nicotinic acetylcholine receptor subunit alpha1 [Tribolium castaneum] >gi|270002818|gb|EEZ99265.1| nicotinic acetylcholine receptor subunit alpha1 [Tribolium castaneum]) HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0 Identity = 335/529 (63.33%), Postives = 405/529 (76.56%), Query Frame = 0 Query: 17 LEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDD------------LGVMYETSKSTSNLVSSKEL----PMITENSGLTNNDNLAYPLSPTDDWPSEGLYS------TTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKK 523 + + DAKRLYDDLLSNYNRLIRPVGN+SDRLTVK+GLKLSQ+I V++K QI+ TNVWVEQEW+DYKLKW+P++Y GV LHVPS++IWLPDIVLYNNADGNYEVTIMTKA+LH++GKV W PPAIYKS C+IDVE+FPFDEQ CFMKFGSWTYDGYMVDLRH++Q + +N+I++G+DLQ+YYIS EWD+M AVRNEK+Y CCEEPYPDI FN+ LRRK+LFYTVN+IIPCVGISFLS+LVFYLPSDSGEKVSL ISILLSLTVFFLLL EIIPPTS +VPLLGKYLLFTM+L T SVV+TI VLNVNFR+P THK+APWV+ F+D+LPK+LFI RP+ E+D D+ + +M + S +L P E SG PLS D E LYS TFD S P+ D + + +E+ + +F+AQHV+N+D+FE A+DWKYVAMVLDR+ LW FT+ACV+GT LII AP+ +D+ KPIDV+ SK+ KK Sbjct: 18 VSGNQDAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLKLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYNGVETLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLSQVQDSNKIDVGIDLQDYYISVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSILVFYLPSDSGEKVSLCISILLSLTVFFLLLVEIIPPTSITVPLLGKYLLFTMLLCTLSVVITIAVLNVNFRSPVTHKLAPWVRVFFIDILPKFLFIERPKKEDDDDNKCQDSMLTDVIQVPMMDKCKPFEKTSFDSFDLGLPPPSRFEASGCFGEPPFPMPLSGGD----EDLYSPASCRTNTFDGT-SDASPSFDKLDMHD--------MEKTLADSRFIAQHVRNKDSFENVAEDWKYVAMVLDRLFLWIFTLACVVGTGLIIFNAPSLYDTTKPIDVLISKVAKK 533
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|118781880|ref|XP_311918.3| (AGAP002974-PA [Anopheles gambiae str. PEST] >gi|51873075|gb|AAU12503.1| nicotinic acetylcholine receptor subunit alpha 1 [Anopheles gambiae] >gi|116129303|gb|EAA08125.3| AGAP002974-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 663.685 bits (1711), Expect = 0.000e+0 Identity = 333/542 (61.44%), Postives = 401/542 (73.99%), Query Frame = 0 Query: 3 VGLVASLLVYNLVGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTD--DWPSEGLYSTTFDEKHSHLIP----NRDFVRPQE------------EPSTLNP---AVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKK 523 V L A + A+PD+KRLYDDLLSNYNRLIRPVGN+SDRLTVK+GL+LSQ+I V++K QI+ TNVWVEQEW+DYKLKW+P++YGGV LHVPS++IWLPDIVLYNNADGNYEVTIMTKA+LH++GKV W PPAIYKS C+IDVE+FPFDEQ CFMKFGSWTYDGYMVDLRH+ Q ++ I++G+DLQ+YYIS EWD+M AVRNEK+Y CCEEPYPDI FN+ LRRK+LFYTVN+IIPCVGISFLSVLVFYLPSDSGEK+SL ISILLSLTVFFLLLAEIIPPTS +VPLLGKYLLFTM+LVT SVVVTI VLNVNFR+P TH+MAPWV + F+++LPK L I RP+ E++ D T T ++ G + P P D + G F E +P + D P P+ P +E+ + A +FVAQHV+N+D FE +DWKYVA+VLDR+ LW FT+ACVLGTCLII+ AP+ +D+ +PID +YSKI KK Sbjct: 4 VLLTAVFIALQFATGLANPDSKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLQQTPDSDNIDIGIDLQDYYISVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMAPWVHRVFIELLPKVLCIERPKKEDEPSDNDDQTPTDVLTDVFQVPPDVEKYVGFCGKEYGTDFDIPALPPSRFDVAASGGVGPCFGEPPLPALPLPGGDDDLFSPTGNGDMSPTCCGDLSPTFEKPLLREMEKTIEASRFVAQHVRNKDKFESVKEDWKYVALVLDRLFLWIFTIACVLGTCLIILQAPSLYDNTQPIDAMYSKIAKK 545
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|170042308|ref|XP_001848873.1| (acetylcholine receptor protein alpha 1, 2, 3, 4 invertebrate [Culex quinquefasciatus] >gi|167865802|gb|EDS29185.1| acetylcholine receptor protein alpha 1, 2, 3, 4 invertebrate [Culex quinquefasciatus]) HSP 1 Score: 659.833 bits (1701), Expect = 0.000e+0 Identity = 333/544 (61.21%), Postives = 402/544 (73.90%), Query Frame = 0 Query: 3 VGLVASLLVYNLVGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRP----EPEEDV----DDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEP-------STLNPAVERAM--------NALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKK 523 V L A + NL A+PD+KRLYDDLLSNYNRLIRPVGN+SDRLTVK+GL+LSQ+I V++K QI+ TNVWVEQEW+DYKLKW+P++YGGV LHVPS++IWLPDIVLYNNADGNYEVTIMTKA+LH++GKV W PPAIYKS C+IDVE+FPFDEQ CFMKFGSWTYDGYMVDLRH+ Q ++ I +G+DLQ+YYIS EWD+M AVRNEK+Y CCEEPYPDI FN+ LRRK+LFYTVN+IIPCVGISFLSVLVFYLPSDSGEK+SL ISILLSLTVFFLLLAEIIPPTS +VPLLGKYLLFTM+LVT SVVVTI VLNVNFR+P THKMAPWV + F+D+LP+ L I+RP EP E+ + L +++ V T+ + + + L S + H + + D P L+P E+ M A +FVAQHV+N+D FE +DWKYVA+VLDR+ LW FT+ACV+GTCLII+ AP+ +D+ +PID +YSKI KK Sbjct: 4 VLLTAVFIALNLATGLANPDSKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDMLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLQQTPDSDNIAVGIDLQDYYISVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHKMAPWVHRVFIDLLPRVLCIQRPKKDDEPSENEELPPEVLTDVFQVPPDVEKYVGYCGKQYSTDFDIPGDTATVTFRRGRIGRGGGHVLASPRYQHCH-YRAGDDDLFSPTGNGDMSPNCCGDLSPTFEKPMLREMEKTIEASRFVAQHVRNKDKFESIEEDWKYVALVLDRLFLWIFTIACVVGTCLIILQAPSLYDNTQPIDAMYSKIAKK 546
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|1067107213|ref|XP_018013894.1| (PREDICTED: acetylcholine receptor subunit alpha-like 1 [Hyalella azteca]) HSP 1 Score: 658.292 bits (1697), Expect = 0.000e+0 Identity = 335/541 (61.92%), Postives = 407/541 (75.23%), Query Frame = 0 Query: 19 ASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRP--EPEEDVDDLGVMYETSKSTSNLVSSK--ELPMI----------TENSGLTNNDNLAYPLSPT-----------DDWPSEGLYSTTFDEKHSHLIPNRD-----FVRPQ--EEPSTL---NPAVE-RAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKK 523 A+P+AKRLY+DLLS YNRLIRPVGN+SDRLTVKLGLKLSQ+I V++K QI+ TNVWV QEW DYKL W+PEEYGGV+ LHVPSQ+IWLPDIVLYNNADGNYEVTIMTKA+LH++G+V W PPAIYKSSC+IDVE+FPFD+Q CFMKFGSWTYDGYMVDL+H++Q+ +N ++ G+DLQEYYISTEWD++ AVRNEK+YPCCEEPYPDI+FN+ +RRK+LFYTVN+IIPCVGISFLSVLVFYLPSDS EKVSL IS+LLSLTVFFLLLAEIIPPTS SVPLLGKYLLFTMILVT SV+VTIGVLNVNFR+P+THKMAPWV+ F+D LPKYL++ RP + +ED D L ++ TS + + ++P I +++ D LA P P DD PS + T + + N D +R EE T+ P+ E + ++ ++AQH+KN D FE DW+YVAMVLDR+ LW FT+A VLGT II AP +D+ PIDVI SK+ +K Sbjct: 33 ANPEAKRLYEDLLSTYNRLIRPVGNNSDRLTVKLGLKLSQLIDVNLKNQIMTTNVWVNQEWSDYKLVWNPEEYGGVQTLHVPSQHIWLPDIVLYNNADGNYEVTIMTKAILHHNGRVKWTPPAIYKSSCEIDVEYFPFDQQTCFMKFGSWTYDGYMVDLQHLDQRADSNVVDPGIDLQEYYISTEWDILTVPAVRNEKFYPCCEEPYPDIYFNITMRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSNEKVSLCISVLLSLTVFFLLLAEIIPPTSLSVPLLGKYLLFTMILVTFSVMVTIGVLNVNFRSPSTHKMAPWVRYVFIDSLPKYLWVERPSKDEDEDTDTLAIITPTSDTLKFDIDDAPYDIPAIPPSRYDRDRYGDSTKFFPTDTLALPAPPPRVDDSALIDELDDTPSTEQKTYTSINYIAQHMKNVDTFEEAMIRAGTFEEEGTMIDDTPSTEQKTYTSINYIAQHMKNVDTFEEIEQDWRYVAMVLDRLFLWIFTLAGVLGTVGIIFRAPALYDTTPPIDVIMSKVAQK 573
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|1048015586|ref|XP_017468787.1| (PREDICTED: acetylcholine receptor subunit alpha-like 1 [Rhagoletis zephyria]) HSP 1 Score: 657.136 bits (1694), Expect = 0.000e+0 Identity = 329/532 (61.84%), Postives = 400/532 (75.19%), Query Frame = 0 Query: 16 GLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEE-------------------DVDDLGVMYETSKSTSN-----LVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKK 523 G A+PDAKRLYDDLLSNYNRLIRPVGN+SDRLTVK+GL+LSQ+I V++K QI+ TNVWVEQEW+DYKLKW+P++YGGV LHVPS++IWLPDIVLYNNADGNYEVTIMTKA+LH++GKV W PPAIYKS C+IDVE+FPFDEQ CFMKFGSWTYDGYMVDLRH+ Q ++ IE+G+DLQ+YYIS EWD+M AVRNEK+Y CCEEPY DI FNL LRRK+LFYTVN+IIPCVGISFLSVLVFYLPSDSGEK+SL ISILLSLTVFFLLLAEIIPPTS +VPLLGKYLLFTM+LVT SVVVTI VLNVNFR+P THKMAPWV++ F+ +LPK L I RP+ E+ DVD V Y++ + + + L +S + + P + + L+S + + S + D ++P +E+ + +F+AQHVKN+D FE +DWKYVAMVLDR+ LW F +ACV+GT LII+ AP+ +D +PID++YSKI KK Sbjct: 286 GGLANPDAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLKQTADSDNIEVGIDLQDYYISVEWDIMRVPAVRNEKFYSCCEEPYLDIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHKMAPWVQRLFIQILPKLLCIERPKKEDPNEDDQPPEVLTDVFHLPPDVDKF-VNYDSKRFSGDYGIPALPASHRFDLAAAGGIAPCFGDPPLPSALPLPGADDDLFSPSGNGDLSPGCCHADLSPTFDKPYMRE--MEKTIEGSRFIAQHVKNKDKFESVEEDWKYVAMVLDRLFLWIFAIACVVGTALIILQAPSLYDQSQPIDILYSKIAKK 814
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|1121157312|ref|XP_019565384.1| (PREDICTED: acetylcholine receptor subunit alpha-like 1 isoform X1 [Aedes albopictus]) HSP 1 Score: 656.751 bits (1693), Expect = 0.000e+0 Identity = 338/553 (61.12%), Postives = 409/553 (73.96%), Query Frame = 0 Query: 3 VGLVASLLVYNLVGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRP----EPEEDVDD----LGVMYETSKSTSNLVS--SKELPMITENSGLTNNDNLAYPLSPTDDWPSEG---------------------LYSTTFDEKHSHLIPN-RDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKK 523 V L A + + A+PD+KRLYDDLLSNYNRLIRPVGN+SDRLTVK+GL+LSQ+I V++K QI+ TNVWVEQEW+DYKLKW+P++YGGV LHVPS++IWLPDIVLYNNADGNYEVTIMTKA+LH++GKV W PPAIYKS C+IDVE+FPFDEQ CFMKFGSWTYDGY+VDLRH+ Q ++ I++G+DLQ+YYIS EWD+M AVRNEK+Y CCEEPYPDI FN+ LRRK+LFYTVN+IIPCVGISFLSVLVFYLPSDSGEK+SL ISILLSLTVFFLLLAEIIPPTS +VPLLGKYLLFTM+LVT SVVVTI VLNVNFR+P THKMAPWV + F+++LP+ L I RP EP E+ + L +++ VS KE + + LA P S D S G L+S T + + PN V P E L +E+ + A +FVAQHV+N+D FE +DWKYVA+VLDR+ LW FT+ACV+GT LII+ AP+ +D+ +PID +YSKI KK Sbjct: 4 VLLTAVFIALHFATGLANPDSKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDQLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYLVDLRHLQQTPDSDNIDVGIDLQDYYISVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHKMAPWVHRVFIELLPRVLCIERPKKDDEPSENEEQAPEVLTDVFQVPPDVEKYVSYCGKEYTTDFDIPVSIPSSPLALPPSRFDVAASGGVGPCFGEPPLPALPLPGGDDDLFSPT---SNGDMSPNCCGDVSPTFEKPLLR-EMEKTIEASRFVAQHVRNKDKFESIEEDWKYVALVLDRLFLWIFTIACVMGTALIILQAPSLYDNTQPIDAMYSKIAKK 552 The following BLAST results are available for this feature:
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold33_size549341:1743..5575+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold33_size549341-snap-gene-0.15 ID=maker-scaffold33_size549341-snap-gene-0.15|Name=nicotinic acetylcholine receptor subunit alpha1|organism=Tigriopus kingsejongensis|type=gene|length=3833bp|location=Sequence derived from alignment at scaffold33_size549341:1743..5575+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nicotinic acetylcholine receptor subunit alpha1' has the following synonyms
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