maker-scaffold33_size549341-snap-gene-0.15-mRNA-1, maker-scaffold33_size549341-snap-gene-0.15-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold33_size549341-snap-gene-0.15-mRNA-1
Unique Namemaker-scaffold33_size549341-snap-gene-0.15-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold33_size549341supercontigscaffold33_size549341:1743..5575 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
nicotinic acetylcholine receptor subunit alpha1maker-scaffold33_size549341-snap-gene-0.15Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1064maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1064Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1065maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1065Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1066maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1066Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1067maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1067Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1068maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1068Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1069maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1069Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1070maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1070Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1071maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1071Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1072maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1072Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1073maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1073Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1074maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:exon:1074Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:five_prime_utrmaker-scaffold33_size549341-snap-gene-0.15-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cds-1951198Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cds-1951199Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cds-1951200Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cds-1951201Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cds-1951202Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cds-1951203Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cds-1951204Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cds-1951205Tigriopus kingsejongensisexon
maker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cdsmaker-scaffold33_size549341-snap-gene-0.15-mRNA-1:cds-1951206Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1951208auto1951208Tigriopus kingsejongensispolypeptide
Tk11514Tk11514Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11514

>Tk11514 ID=Tk11514|Name=Tk11514|organism=Tigriopus kingsejongensis|type=polypeptide|length=532bp
MLVGLVASLLVYNLVGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTV
KLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVP
SQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDID
VEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYI
STEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCV
GISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPL
LGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKY
LFIRRPEPEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLA
YPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAM
NALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLII
MAAPTHHDSRKPIDVIYSKIDKKNTIFTMNNL
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mRNA from alignment at scaffold33_size549341:1743..5575+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold33_size549341-snap-gene-0.15-mRNA-1 ID=maker-scaffold33_size549341-snap-gene-0.15-mRNA-1|Name=maker-scaffold33_size549341-snap-gene-0.15-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=3833bp|location=Sequence derived from alignment at scaffold33_size549341:1743..5575+ (Tigriopus kingsejongensis)
CCTGGCCAAGCTGATGATACGACAGACTTTTAGGGACGATCCTGAAAGGA
GAACGCAGTGGAACCAAACTAGGCATGGAGGAAGAAAAGGCCCTCTGCGA
GTGAGAATTCTGCTATTCTGTTGTTGCCTCATCCCAGTACACAATGTTGG
TGGGCCTGGTGGCCAGTCTGTTGGTGTACAACCTGGTGGGCCTGGAGGCC
AGCCCCGATGCCAAGAGGCTATATGATGACCTACTATCAAATTACAACAG
GTAAGCGATGTGTCAGCCTGGTATGAGAGAATCTCCACGGCCTCATACGC
CTCCCCATCCCAGATTGATACGGCCTGTGGGAAACAGCTCGGACCGTCTC
ACCGTCAAGCTGGGGCTAAAGCTCTCACAGATCATTGGCGTGGACATGAA
GAGGCAGATTGTGATTACCAATGTCTGGGTGGAACAGGTGAGCATAGATA
GGGTCCTGAAGACTCGTGTTCATTAGGCTCATCAATCAGGAACCGACATC
GGAGTGTCACTCTTCCAGGAATGGCACGACTACAAGCTGAAGTGGGACCC
AGAGGAGTACGGAGGAGTCCGACATCTCCATGTTCCCTCCCAAAACATTT
GGCTCCCCGATATCGTCCTTTACAACAAGTATTAACTCTCCCTGGCTCAG
ACAAGCCAAAGTCGATATTAACCCCGTAATTTGCTCCAGTGCTGATGGTA
ACTACGAGGTGACCATCATGACCAAGGCCGTGCTTCATTACTCGGGGAAA
GTGACGTGGAATCCTCCCGCTATTTACAAGTCCTCGTGCGACATCGACGT
CGAGTTCTTCCCTTTCGATGAGCAGAAATGCTTCATGAAGTTCGGCTCTT
GGACCTACGATGGATACATGGTAATGGAAGCTAAATATTGATGCACCCAC
TCCGATGATGCACTCTCATTCATTGCTCTCCAGGTTGATCTGAGGCACAT
CAACCAAAAGAAGGGCACCAATCGGATCGAGATGGGCATGGATCTCCAAG
AGTACTACATCTCCACCGAGTGGGATCTCATGGACACTTGGGCCGTGCGG
AACGAGAAGTACTATCCCTGCTGCGAGGAACCCTATCCGGATATCTTTTT
CAACTTGATTTTGCGCCGAAAATCCTTGTTTTACACAGTCAATGTCATCA
TTCCCTGCGTGGGAATCTCTTTCTTATCGGTCTTGGTGTTCTATTTGCCT
TCAGATTCCGGAGAGAAGGTGAAATAAGGGGGTGATGGTGCCTGAAATCT
CACGATTGGCCAACAACAACTCTCTCCTTTTCAGGTCTCCTTGTCTATTT
CCATTCTACTTTCACTCACAGTGTTCTTCCTGCTTTTAGCCGAGATCATT
CCGCCTACTTCAAAGTCAGTCCCATTATTGGGTGAGACCCGTTCGAGCTG
TCACTCGTGCACCTCATTAGCTTGACGAATGACCCCATGAACCATTTCTT
ATTCCAGGCAAATACCTCCTGTTTACCATGATATTAGTCACGTGCTCCGT
AGTGGTCACCATTGGCGTGCTCAACGTCAACTTCAGGACTCCGGCAACCC
ACAAGGTCGGTGCATTGATCCCCAAATGGAATCAAGGATCAGGCCTGGCG
TGTGTGGGTTTTGTTCACGCTGATTAATGGACCTTTGCAGATGGCTCCTT
GGGTCAAGAAGACGTTTGTGGACGTGTTGCCCAAATACCTATTTATCCGT
CGGCCCGAGCCCGAGGAGGACGTGGATGACCTGGGAGTCATGTACGAGAC
CTCCAAGTCCACGTCCAACCTAGTTTCTTCCAAGGAACTGCCCATGATCA
CAGAGAACAGTGGACTGACCAACAACGACAACTTGGCCTATCCACTCTCC
CCCACGGACGATTGGCCGAGCGAGGGTCTTTATTCCACCACATTCGATGA
GAAACATTCTCATCTCATCCCCAACAGGGACTTTGTGAGGTCAGTGTGGA
TTAGCAATCTGAAAAGCTCATTCATTCAGGCACACTCGATCCCTATGGCT
TGAGATATGACTTCTCGAATCCCCATTAAGATCGGTCTACAGCGAAACAG
ACGTCTCTCTCAGTCTCCCTGGTGATGGAAACAAAGAGTAGTGAGGGAAA
ATGGACACTTTCATTTCAAGGCAGGGTGGTTTTTGGATAATGGGTATTCC
CCAGCCTGTTTGAGTGCGCTTTGCCGTGCGGATGAGAACTTTTCTTGCTA
CGCAGGGAAATCCAATCTGAGCATGGATCATCTGCGTGACTTAACGCGGG
CAATTATCAAAGCTGAAATGAGGCCAGTCAAGCCTTGTCCATTCAGCGGA
CGCTCTATATGATGAGTCGAATGCTGTGCAATGGGGTCATAACCTTGATT
TGACCATTGTCCATACTATGAAGTGTGCTCCAGTCTCTATGGGCGACGAC
AAGATAAAGTTTCTAGTCCACCAGACACGAGTTGGCAGGCCAACTACGCC
AATGACAAGACGACTCTTCATTTCGTCCACGATAAGGTCTCTCTCTCTCC
GTTGCAGGCCTCAAGAAGAGCCCAGCACGCTCAACCCGGCCGTTGAAAGG
GCCATGAACGCCCTGAAATTTGTTGCTCAGCATGTTAAGAACGAAGATAA
CTTTGAAGGAGTAAGTTACCTGAGTTGAAAGGGGAAGATCCCAGACGCAG
CCAAGATGACAAGTCAGGTTTGAGAGGCGAGCGAAAAGTCCCCTCCAGCA
ATCTGTTGACTTTGGTCCGATCAAATTTCACTCTCTCGAGCGCCCAAGTG
ACCTCTGATATCGTTTTCCTCCTATTAGTTTGCAGATGATTGGAAATACG
TGGCCATGGTGCTAGATAGAATTCTTTTATGGACCTTTACCGTTGCATGC
GTCCTAGGTAAGCTTCCAGGAATTTTCAAAGATCCAGTAGAGGGGTAAAA
CTAACATTGCCATGATGACACAGGTGCAAAGAGATGCAGAATATTTTTGA
GTAGCCTCAAACGTGCCCTAACCAATGCATCAACGCATCGGTATTATTTG
TAGTGTATATTAGACCAGGCGTTACAAAATATGTACAAATGTTAATGTAT
GTGCGAGTATAAAGGTAGCCAACATAGCTCAGTGCCAGCGAACGTCGCGC
TGGTGCTGAGTCCTAGTTTACAAGAACTATTGGTGTTAAGTCATTCCCAG
CTGTTGTTGTTTCACCTGTGATAATTCCTCAAAGGTAAGGTAACACTTAA
TGGTAAATTTGCAAAGCCTTCCGCTTCTCCATCTCCCAATTGGTCATACA
TATCCAGGGCCTTCAAAGTAGACGCACAAAAAATAAATGTGTGCATTTGG
TAAACTGTGTAGGTTGCAAAGACCCATGGTGCGCTCATATGTACACACCT
AGGTAGACGTGTATTTGATGATACGTATATAATCATTGTCTAATGGCTAA
AGTCTAATGTTTGTAATGATGCAGCTAAGCTTAAGTAGAACAATAACATT
GAGTGTGGAGCCAATCATAATCTATGCCCATTTTCATCCGACACACATCA
GTTGCCTATCAGGACGTTTATATTACTTAAAAAAATGAAAAAGGGCCTAA
CCCATGTAAGCATCTGCATAGTAAATGTCGGATATAATGAGCAAATGATA
AGCAGCACACTTAAAACGTTCATGGCTTGTGTTTTTATACTAGGGAAGGA
AACAAAATCGGTCAATTTCACATTTGAATGTCTTTTTAGGAACTTGCCTC
ATTATTATGGCTGCTCCCACCCATCACGATTCGAGAAAGCCCATCGACGT
TATATACTCCAAGATTGACAAGAAAAATACAATCTTCACCATGAACAACC
TCTAGGCCGAGGAATGATTGGTGCTAGTTTTAC
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